RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 HRH4Q9H3N8 390 aa14.9□□□□□ -0.02
COL17A1-202ENST00000369733 CXorf36Q9H7Y0 433 aa14.9□□□□□ -0.02
COL17A1-202ENST00000369733 PLCXD1Q9NUJ7 323 aa14.9□□□□□ -0.02
COL17A1-202ENST00000369733 UBE2J1Q9Y385 318 aaPredicted RBP14.9□□□□□ -0.02
COL17A1-202ENST00000369733 FXYD1O00168 92 aa14.9□□□□□ -0.02
COL17A1-202ENST00000369733 TXNL1O43396 289 aa14.9□□□□□ -0.02
COL17A1-202ENST00000369733 BDKRB2P30411 391 aa14.9□□□□□ -0.02
COL17A1-202ENST00000369733 TGM4P49221 684 aa14.9□□□□□ -0.02
COL17A1-202ENST00000369733 CHRNEQ04844 493 aa14.9□□□□□ -0.02
COL17A1-202ENST00000369733 MFSD13AQ14CX5 517 aa14.9□□□□□ -0.02
COL17A1-202ENST00000369733 LMX1AQ8TE12 382 aa14.9□□□□□ -0.02
COL17A1-202ENST00000369733 PITX2Q99697 317 aa14.9□□□□□ -0.02
COL17A1-202ENST00000369733 GABARAPL3Q9BY60 117 aa14.9□□□□□ -0.02
COL17A1-202ENST00000369733 CCNOP22674 350 aa14.9□□□□□ -0.02
COL17A1-202ENST00000369733 PTBP1P26599 531 aaKnown RBP eCLIP14.9□□□□□ -0.02
COL17A1-202ENST00000369733 GPM6BQ13491 265 aa14.9□□□□□ -0.02
COL17A1-202ENST00000369733 PXDC1Q5TGL8 231 aa14.9□□□□□ -0.02
COL17A1-202ENST00000369733 OR13C2Q8NGS9 318 aa14.9□□□□□ -0.02
COL17A1-202ENST00000369733 BTBD2Q9BX70 525 aa14.9□□□□□ -0.02
COL17A1-202ENST00000369733 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.9□□□□□ -0.02
COL17A1-202ENST00000369733 C20orf85Q9H1P6 137 aa14.9□□□□□ -0.02
COL17A1-202ENST00000369733 KCNJ16Q9NPI9 418 aa14.9□□□□□ -0.02
COL17A1-202ENST00000369733 TMPRSS11EQ9UL52 423 aa14.9□□□□□ -0.02
COL17A1-202ENST00000369733 CDHR4A6H8M9 788 aa14.89□□□□□ -0.03
COL17A1-202ENST00000369733 LUMP51884 338 aaPredicted RBP14.89□□□□□ -0.03
COL17A1-202ENST00000369733 CLDN12P56749 244 aa14.89□□□□□ -0.03
COL17A1-202ENST00000369733 RAB33AQ14088 237 aa14.89□□□□□ -0.03
COL17A1-202ENST00000369733 ARHGAP19Q14CB8 494 aa14.89□□□□□ -0.03
COL17A1-202ENST00000369733 TMEM179BQ7Z7N9 219 aa14.89□□□□□ -0.03
COL17A1-202ENST00000369733 COMTD1Q86VU5 262 aa14.89□□□□□ -0.03
COL17A1-202ENST00000369733 QRSL1Q9H0R6 528 aaKnown RBP14.89□□□□□ -0.03
COL17A1-202ENST00000369733 RBM38Q9H0Z9 239 aaKnown RBP14.89□□□□□ -0.03
COL17A1-202ENST00000369733 FADS1O60427 444 aa14.89□□□□□ -0.03
COL17A1-202ENST00000369733 RAB6AP20340 208 aa14.89□□□□□ -0.03
COL17A1-202ENST00000369733 IMPA1P29218 277 aa14.89□□□□□ -0.03
COL17A1-202ENST00000369733 HTR3AP46098 478 aa14.89□□□□□ -0.03
COL17A1-202ENST00000369733 SELENBP1Q13228 472 aa14.89□□□□□ -0.03
COL17A1-202ENST00000369733 INTS14Q96SY0 518 aa14.89□□□□□ -0.03
COL17A1-202ENST00000369733 CWH43Q9H720 699 aa14.89□□□□□ -0.03
COL17A1-202ENST00000369733 A4GALTQ9NPC4 353 aa14.89□□□□□ -0.03
COL17A1-202ENST00000369733 NRIP3Q9NQ35 241 aa14.89□□□□□ -0.03
COL17A1-202ENST00000369733 hCG_1807616A0A1W2PRN6 198 aa14.89□□□□□ -0.03
COL17A1-202ENST00000369733 PRICKLE3O43900 615 aaPredicted RBP14.89□□□□□ -0.03
COL17A1-202ENST00000369733 MPIG6BO95866 241 aa14.89□□□□□ -0.03
COL17A1-202ENST00000369733 PNMTP11086 282 aa14.89□□□□□ -0.03
COL17A1-202ENST00000369733 PSMB5P28074 263 aa14.89□□□□□ -0.03
COL17A1-202ENST00000369733 HTR1FP30939 366 aa14.89□□□□□ -0.03
COL17A1-202ENST00000369733 HENMT1Q5T8I9 393 aaKnown RBP14.89□□□□□ -0.03
COL17A1-202ENST00000369733 KLHDC9Q8NEP7 349 aa14.89□□□□□ -0.03
COL17A1-202ENST00000369733 VRK1Q99986 396 aaPredicted RBP14.89□□□□□ -0.03
COL17A1-202ENST00000369733 FZD3Q9NPG1 666 aa14.89□□□□□ -0.03
COL17A1-202ENST00000369733 RNF215Q9Y6U7 377 aa14.89□□□□□ -0.03
COL17A1-202ENST00000369733 ACOD1A6NK06 481 aa14.89□□□□□ -0.03
COL17A1-202ENST00000369733 TMEM189-UBE2V1I3L0A0 370 aa14.89□□□□□ -0.03
COL17A1-202ENST00000369733 GPRIN2O60269 458 aa14.89□□□□□ -0.03
COL17A1-202ENST00000369733 LALBAP00709 142 aa14.89□□□□□ -0.03
COL17A1-202ENST00000369733 NKX6-1P78426 367 aaPredicted RBP14.89□□□□□ -0.03
COL17A1-202ENST00000369733 KCNJ10P78508 379 aa14.89□□□□□ -0.03
COL17A1-202ENST00000369733 GBX1Q14549 363 aa14.89□□□□□ -0.03
COL17A1-202ENST00000369733 LIPIQ6XZB0 460 aa14.89□□□□□ -0.03
COL17A1-202ENST00000369733 ZNF704Q6ZNC4 412 aaPredicted RBP14.89□□□□□ -0.03
COL17A1-202ENST00000369733 GKN2Q86XP6 184 aa14.89□□□□□ -0.03
COL17A1-202ENST00000369733 ZFP57Q9NU63 452 aa14.89□□□□□ -0.03
COL17A1-202ENST00000369733 HSFX1Q9UBD0 423 aa14.89□□□□□ -0.03
COL17A1-202ENST00000369733 SLC7A11Q9UPY5 501 aa14.89□□□□□ -0.03
COL17A1-202ENST00000369733 NOX1Q9Y5S8 564 aa14.89□□□□□ -0.03
COL17A1-202ENST00000369733 SOCS6O14544 535 aa14.89□□□□□ -0.03
COL17A1-202ENST00000369733 P2RX6O15547 441 aa14.89□□□□□ -0.03
COL17A1-202ENST00000369733 TP53P04637 393 aaPredicted RBP14.89□□□□□ -0.03
COL17A1-202ENST00000369733 SNRNP70P08621 437 aaKnown RBP14.89□□□□□ -0.03
COL17A1-202ENST00000369733 TIMP2P16035 220 aa14.89□□□□□ -0.03
COL17A1-202ENST00000369733 HIST1H1TP22492 207 aaPredicted RBP14.89□□□□□ -0.03
COL17A1-202ENST00000369733 SRP9P49458 86 aaKnown RBP14.89□□□□□ -0.03
COL17A1-202ENST00000369733 ETV1P50549 477 aa14.89□□□□□ -0.03
COL17A1-202ENST00000369733 CTF1Q16619 201 aa14.89□□□□□ -0.03
COL17A1-202ENST00000369733 MPP7Q5T2T1 576 aa14.89□□□□□ -0.03
COL17A1-202ENST00000369733 TTLL10Q6ZVT0 673 aa14.89□□□□□ -0.03
COL17A1-202ENST00000369733 ZBED3Q96IU2 234 aaPredicted RBP14.89□□□□□ -0.03
COL17A1-202ENST00000369733 CDCA4Q9BXL8 241 aa14.89□□□□□ -0.03
COL17A1-202ENST00000369733 ALOXE3Q9BYJ1 711 aa14.89□□□□□ -0.03
COL17A1-202ENST00000369733 SERTAD3Q9UJW9 196 aa14.89□□□□□ -0.03
COL17A1-202ENST00000369733 LAMB1P07942 1786 aa14.88□□□□□ -0.03
COL17A1-202ENST00000369733 SDC3O75056 442 aa14.88□□□□□ -0.03
COL17A1-202ENST00000369733 CRTAPO75718 401 aaPredicted RBP14.88□□□□□ -0.03
COL17A1-202ENST00000369733 M6PRP20645 277 aa14.88□□□□□ -0.03
COL17A1-202ENST00000369733 S100A11P31949 105 aa14.88□□□□□ -0.03
COL17A1-202ENST00000369733 GPR176Q14439 515 aa14.88□□□□□ -0.03
COL17A1-202ENST00000369733 GPR157Q5UAW9 335 aa14.88□□□□□ -0.03
COL17A1-202ENST00000369733 DTD2Q96FN9 168 aa14.88□□□□□ -0.03
COL17A1-202ENST00000369733 SYT17Q9BSW7 474 aa14.88□□□□□ -0.03
COL17A1-202ENST00000369733 CAMK2AQ9UQM7 478 aa14.88□□□□□ -0.03
COL17A1-202ENST00000369733 MMP2P08253 660 aa14.88□□□□□ -0.03
COL17A1-202ENST00000369733 SPNP16150 400 aa14.88□□□□□ -0.03
COL17A1-202ENST00000369733 KCNJ5P48544 419 aa14.88□□□□□ -0.03
COL17A1-202ENST00000369733 SLCO4C1Q6ZQN7 724 aa14.88□□□□□ -0.03
COL17A1-202ENST00000369733 BPIFB2Q8N4F0 458 aa14.88□□□□□ -0.03
COL17A1-202ENST00000369733 OR51T1Q8NGJ9 327 aa14.88□□□□□ -0.03
COL17A1-202ENST00000369733 STK35Q8TDR2 534 aa14.88□□□□□ -0.03
COL17A1-202ENST00000369733 SEMA4GQ9NTN9 838 aa14.88□□□□□ -0.03
COL17A1-202ENST00000369733 B3GALT1Q9Y5Z6 326 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms