RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 OAFQ86UD1 273 aa12.92□□□□□ -0.34
USF1-202ENST00000368020 PLXDC1Q8IUK5 500 aa12.92□□□□□ -0.34
USF1-202ENST00000368020 CPOQ8IVL8 374 aa12.92□□□□□ -0.34
USF1-202ENST00000368020 GPALPP1Q8IXQ4 340 aa12.92□□□□□ -0.34
USF1-202ENST00000368020 ACBD7Q8N6N7 88 aa12.92□□□□□ -0.34
USF1-202ENST00000368020 ZNF485Q8NCK3 441 aa12.92□□□□□ -0.34
USF1-202ENST00000368020 RCBTB1Q8NDN9 531 aa12.92□□□□□ -0.34
USF1-202ENST00000368020 PFN4Q8NHR9 129 aa12.92□□□□□ -0.34
USF1-202ENST00000368020 GATAD2BQ8WXI9 593 aa12.92□□□□□ -0.34
USF1-202ENST00000368020 ITPKCQ96DU7 683 aa12.92□□□□□ -0.34
USF1-202ENST00000368020 LRFN3Q9BTN0 628 aa12.92□□□□□ -0.34
USF1-202ENST00000368020 IFT27Q9BW83 186 aa12.92□□□□□ -0.34
USF1-202ENST00000368020 RBCK1Q9BYM8 510 aa12.92□□□□□ -0.34
USF1-202ENST00000368020 SLC19A3Q9BZV2 496 aa12.92□□□□□ -0.34
USF1-202ENST00000368020 CAPN10Q9HC96 672 aa12.92□□□□□ -0.34
USF1-202ENST00000368020 MKKSQ9NPJ1 570 aaPredicted RBP12.92□□□□□ -0.34
USF1-202ENST00000368020 ASB6Q9NWX5 421 aa12.92□□□□□ -0.34
USF1-202ENST00000368020 POLHQ9Y253 713 aa12.92□□□□□ -0.34
USF1-202ENST00000368020 CARD8Q9Y2G2 431 aa12.92□□□□□ -0.34
USF1-202ENST00000368020 PCDHGB6Q9Y5F9 930 aa12.92□□□□□ -0.34
USF1-202ENST00000368020 CSNK1G3Q9Y6M4 447 aa12.92□□□□□ -0.34
USF1-202ENST00000368020 COL5A1P20908 1838 aaPredicted RBP12.91□□□□□ -0.34
USF1-202ENST00000368020 NUDT21O43809 227 aaKnown RBP12.91□□□□□ -0.34
USF1-202ENST00000368020 DUX1O43812 170 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 MSL3P1P0C860 447 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 HK1P19367 917 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 CD1CP29017 333 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 ADH7P40394 386 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 RFX3P48380 749 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 ARL4DP49703 201 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 TAS2R43P59537 309 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 ACTC1P68032 377 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 ACTA1P68133 377 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 GPLD1P80108 840 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 HSD11B2P80365 405 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 FOXK2Q01167 660 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 IFITM3Q01628 133 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 TRAM1Q15629 374 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 OR2G6Q5TZ20 316 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 AGAP7PQ5VUJ5 663 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 LINC00114Q6XXX2 140 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 KMT5CQ86Y97 462 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 C16orf52Q8NHV5 167 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 C1GALT1C1Q96EU7 318 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 SECISBP2Q96T21 854 aaKnown RBP12.91□□□□□ -0.34
USF1-202ENST00000368020 ELF4Q99607 663 aaPredicted RBP12.91□□□□□ -0.34
USF1-202ENST00000368020 KCNN2Q9H2S1 579 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 ABCB10Q9NRK6 738 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 C20orf141Q9NUB4 165 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 HAO2Q9NYQ3 351 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 ERVK-19Q9WJR5 959 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 NUP210LQ5VU65 1888 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 IGHV5-51A0A0C4DH38 117 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 SERINC4A6NH21 518 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 TGFBR3LH3BV60 316 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 J3QRE1 110 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 YKT6O15498 198 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 PTP4A3O75365 173 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 PIAS2O75928 621 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 CSTAP01040 98 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 APOA1P02647 267 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 CT45A8P0DMV1 189 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 CT45A9P0DMV2 189 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 PEPDP12955 493 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 RNF144AP50876 292 aaPredicted RBP12.91□□□□□ -0.34
USF1-202ENST00000368020 PSMD7P51665 324 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 DEFB133Q30KQ1 61 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 CRTC2Q53ET0 693 aaPredicted RBP12.91□□□□□ -0.34
USF1-202ENST00000368020 CT45A2Q5DJT8 189 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 PLBD1Q6P4A8 553 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 NPSR1Q6W5P4 371 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 ZAR1Q86SH2 424 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 CACTIN-AS1Q8N1I8 211 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 BCORP1Q8N888 145 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 ZNF615Q8N8J6 731 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 SETD6Q8TBK2 473 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 GRHL3Q8TE85 626 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 DOK4Q8TEW6 326 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 TM9SF4Q92544 642 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 TMCO6Q96DC7 493 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 ART5Q96L15 291 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 SLC46A1Q96NT5 459 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 IRF2BPLQ9H1B7 796 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 ATP13A2Q9NQ11 1180 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 SNTG1Q9NSN8 517 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 CUTCQ9NTM9 273 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 FLRT3Q9NZU0 649 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 KLHL21Q9UJP4 597 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 ZNF229Q9UJW7 825 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 SF3B6Q9Y3B4 125 aaKnown RBP12.91□□□□□ -0.34
USF1-202ENST00000368020 CMAHPQ9Y471 501 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 CLDN16Q9Y5I7 305 aa12.91□□□□□ -0.34
USF1-202ENST00000368020 MUC6Q6W4X9 2439 aa12.9□□□□□ -0.34
USF1-202ENST00000368020 RGS5O15539 181 aa12.9□□□□□ -0.34
USF1-202ENST00000368020 TBX1O43435 398 aa12.9□□□□□ -0.34
USF1-202ENST00000368020 CDC123O75794 336 aaPredicted RBP12.9□□□□□ -0.34
USF1-202ENST00000368020 OR2B3O76000 313 aa12.9□□□□□ -0.34
USF1-202ENST00000368020 CDRT1O95170 752 aa12.9□□□□□ -0.34
USF1-202ENST00000368020 NTN1O95631 604 aa12.9□□□□□ -0.34
USF1-202ENST00000368020 IGKV1D-16P01601 117 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms