RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 MED6O75586 246 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 SPDEFO95238 335 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 DDAH2O95865 285 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 SERPINA7P05543 415 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 IL3P08700 152 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 RNF224P0DH78 156 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 DCTP40126 519 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 HNRNPA0Q13151 305 aaKnown RBP8.12□□□□□ -1.11
SYNE1-206ENST00000367253 ACKR1Q16570 336 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 LBHQ53QV2 105 aaPredicted RBP8.12□□□□□ -1.11
SYNE1-206ENST00000367253 TMIGD1Q6UXZ0 262 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 PYROXD2Q8N2H3 581 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 FIBINQ8TAL6 211 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 TCTN2Q96GX1 697 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 SH3YL1Q96HL8 342 aaPredicted RBP8.12□□□□□ -1.11
SYNE1-206ENST00000367253 CHST11Q9NPF2 352 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 A0A1B0GUH1 482 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 A0A1W2PP18 115 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 FAM171A2A8MVW0 826 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 EIF1AYO14602 144 aaKnown RBP8.12□□□□□ -1.11
SYNE1-206ENST00000367253 NPHS1O60500 1241 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 RBBP9O75884 186 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 DFFBO76075 338 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 CRHP06850 196 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 OR8U9P0C7N5 309 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 ANXA7P20073 488 aaKnown RBP8.12□□□□□ -1.11
SYNE1-206ENST00000367253 EIF1AXP47813 144 aaKnown RBP8.12□□□□□ -1.11
SYNE1-206ENST00000367253 NOVP48745 357 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 HSF1Q00613 529 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 ZNF763Q0D2J5 394 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 ERV3-1Q14264 604 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 SIX1Q15475 284 aaPredicted RBP8.12□□□□□ -1.11
SYNE1-206ENST00000367253 RAB11BQ15907 218 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 CDNFQ49AH0 187 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 SLC35F1Q5T1Q4 408 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 STPG1Q5TH74 334 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 CLEC6AQ6EIG7 209 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 PHF13Q86YI8 300 aaPredicted RBP8.12□□□□□ -1.11
SYNE1-206ENST00000367253 Q8N402 240 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 C12orf29Q8N999 325 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 C10orf82Q8WW14 230 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 GIMAP1Q8WWP7 306 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 DPH2Q9BQC3 489 aaPredicted RBP8.12□□□□□ -1.11
SYNE1-206ENST00000367253 TOLLIPQ9H0E2 274 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 ABCG5Q9H222 651 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 NELFAQ9H3P2 528 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 ZBTB20Q9HC78 741 aaPredicted RBP8.12□□□□□ -1.11
SYNE1-206ENST00000367253 OXSMQ9NWU1 459 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 NKX1-2Q9UD57 310 aaPredicted RBP8.12□□□□□ -1.11
SYNE1-206ENST00000367253 A0A1B0GV90 55 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 C9JVG2 144 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 COCHO43405 550 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 RCBTB2O95199 551 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 RAC2P15153 192 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 ITGB7P26010 798 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 CCR5P51681 352 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 RAB8AP61006 207 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 DSC2Q02487 901 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 ABRAXAS2Q15018 415 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 DPYSL2Q16555 572 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 NTRK2Q16620 822 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 PLEKHS1Q5SXH7 462 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 FBXL22Q6P050 247 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 LINC00471Q8N535 108 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 ZNF439Q8NDP4 499 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 IPPKQ9H8X2 491 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 MRPL15Q9P015 296 aaKnown RBP8.11□□□□□ -1.11
SYNE1-206ENST00000367253 KLHL13Q9P2N7 655 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 SLC7A7Q9UM01 511 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 COL5A3P25940 1745 aaPredicted RBP8.11□□□□□ -1.11
SYNE1-206ENST00000367253 NPEPPSL1A6NEC2 478 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 TMEM210A6NLX4 147 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 D6RAR5 112 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 CYB5R3P00387 301 aaPredicted RBP8.11□□□□□ -1.11
SYNE1-206ENST00000367253 UGT2B7P16662 529 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 TPSB2P20231 275 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 FPR1P21462 350 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 NUDT6P53370 316 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 MTPNP58546 118 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 EIF2B1Q14232 305 aaKnown RBP8.11□□□□□ -1.11
SYNE1-206ENST00000367253 TPSAB1Q15661 275 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 PIGGQ5H8A4 983 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 OR2T5Q6IEZ7 315 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 PTOV1Q86YD1 416 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 RASGEF1CQ8N431 466 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 OR2T29Q8NH02 315 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 FGGYQ96C11 551 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 KCNC2Q96PR1 638 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 SULT4A1Q9BR01 284 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 C14orf119Q9NWQ9 140 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 FKBPLQ9UIM3 349 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 A0A0U1RQJ8 604 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 ZNF840PA6NDX5 716 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 GALR3O60755 368 aaPredicted RBP8.11□□□□□ -1.11
SYNE1-206ENST00000367253 SLURP2P0DP57 97 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 CKMT1AP12532 417 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 SLC6A8P48029 635 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 SOX9P48436 509 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 ZXDAP98168 799 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 SERINC3Q13530 473 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms