RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 SIDT1Q9NXL6 827 aaKnown RBP14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 NUBP2Q9Y5Y2 271 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 BTBD17A6NE02 478 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 RAB38P57729 211 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 DEFB103AP81534 67 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 SLC7A9P82251 487 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 PAN3Q58A45 887 aaKnown RBP14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 TMPRSS7Q7RTY8 843 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 LRRC18Q8N456 261 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 OR9Q2Q8NGE9 314 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 SLC25A18Q9H1K4 315 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 EGLN3Q9H6Z9 239 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 FKRPQ9H9S5 495 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 MROH6A6NGR9 719 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 PENKP01210 267 aaPredicted RBP14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 HMGN2P05204 90 aaKnown RBP14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 PRKACBP22694 351 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 KIR2DL3P43628 341 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 ZNF674Q2M3X9 581 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 CCNJQ5T5M9 372 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 FAM69AQ5T7M9 428 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 CPZQ66K79 652 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 AAED1Q7RTV5 226 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 C19orf47Q8N9M1 422 aaKnown RBP14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 MFSD9Q8NBP5 474 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 PBX4Q9BYU1 374 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 HSD3B7Q9H2F3 369 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 NME7Q9Y5B8 376 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 CSNK1G3Q9Y6M4 447 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 SLC6A11P48066 632 aa14.71□□□□□ -0.05
NUCKS1-201ENST00000367142 OR8B8Q15620 311 aa14.71□□□□□ -0.05
NUCKS1-201ENST00000367142 SLC22A6Q4U2R8 563 aa14.71□□□□□ -0.05
NUCKS1-201ENST00000367142 SFRP5Q5T4F7 317 aa14.71□□□□□ -0.05
NUCKS1-201ENST00000367142 LDLRAD1Q5T700 205 aa14.71□□□□□ -0.05
NUCKS1-201ENST00000367142 PTCRAQ6ISU1 281 aaPredicted RBP14.71□□□□□ -0.05
NUCKS1-201ENST00000367142 FBXW12Q6X9E4 464 aa14.71□□□□□ -0.05
NUCKS1-201ENST00000367142 SIAH1Q8IUQ4 282 aa14.71□□□□□ -0.05
NUCKS1-201ENST00000367142 C17orf50Q8WW18 174 aa14.71□□□□□ -0.05
NUCKS1-201ENST00000367142 MYLIPQ8WY64 445 aa14.71□□□□□ -0.05
NUCKS1-201ENST00000367142 NKX3-1Q99801 234 aaPredicted RBP14.71□□□□□ -0.05
NUCKS1-201ENST00000367142 CENPOQ9BU64 300 aa14.71□□□□□ -0.05
NUCKS1-201ENST00000367142 SORBS1Q9BX66 1292 aaKnown RBP14.71□□□□□ -0.05
NUCKS1-201ENST00000367142 PPIL3Q9H2H8 161 aaKnown RBP14.71□□□□□ -0.05
NUCKS1-201ENST00000367142 WDR37Q9Y2I8 494 aa14.71□□□□□ -0.05
NUCKS1-201ENST00000367142 TMEM269A0A1B0GVZ9 245 aa14.71□□□□□ -0.05
NUCKS1-201ENST00000367142 TRAPPC2LQ9UL33 140 aa14.71□□□□□ -0.05
NUCKS1-201ENST00000367142 RETP07949 1114 aa14.71□□□□□ -0.05
NUCKS1-201ENST00000367142 TAS2R30P59541 319 aa14.71□□□□□ -0.05
NUCKS1-201ENST00000367142 SLC35A1P78382 337 aa14.71□□□□□ -0.05
NUCKS1-201ENST00000367142 HYLS1Q96M11 299 aa14.71□□□□□ -0.05
NUCKS1-201ENST00000367142 GMLQ99445 158 aa14.71□□□□□ -0.05
NUCKS1-201ENST00000367142 IL17CQ9P0M4 197 aa14.71□□□□□ -0.05
NUCKS1-201ENST00000367142 PCDHGA1Q9Y5H4 931 aa14.71□□□□□ -0.05
NUCKS1-201ENST00000367142 ACTL7AQ9Y615 435 aa14.71□□□□□ -0.05
NUCKS1-201ENST00000367142 MYO5BQ9ULV0 1848 aa14.71□□□□□ -0.06
NUCKS1-201ENST00000367142 VEZF1Q14119 521 aa14.71□□□□□ -0.06
NUCKS1-201ENST00000367142 ENDOVQ8N8Q3 282 aaKnown RBP14.71□□□□□ -0.06
NUCKS1-201ENST00000367142 INPP5EQ9NRR6 644 aa14.71□□□□□ -0.06
NUCKS1-201ENST00000367142 TEX10Q9NXF1 929 aaPredicted RBP14.71□□□□□ -0.06
NUCKS1-201ENST00000367142 IGKV6-21A0A0C4DH24 114 aa14.71□□□□□ -0.06
NUCKS1-201ENST00000367142 C17orf112F2Z3M2 114 aa14.71□□□□□ -0.06
NUCKS1-201ENST00000367142 TK1P04183 234 aa14.71□□□□□ -0.06
NUCKS1-201ENST00000367142 PVRP15151 417 aa14.71□□□□□ -0.06
NUCKS1-201ENST00000367142 PSMB10P40306 273 aa14.71□□□□□ -0.06
NUCKS1-201ENST00000367142 RPS18P62269 152 aaKnown RBP14.71□□□□□ -0.06
NUCKS1-201ENST00000367142 VASNQ6EMK4 673 aa14.71□□□□□ -0.06
NUCKS1-201ENST00000367142 C5orf46Q6UWT4 87 aa14.71□□□□□ -0.06
NUCKS1-201ENST00000367142 OR6T1Q8NGN1 323 aa14.71□□□□□ -0.06
NUCKS1-201ENST00000367142 OR7D2Q96RA2 312 aa14.71□□□□□ -0.06
NUCKS1-201ENST00000367142 OR6C1Q96RD1 312 aa14.71□□□□□ -0.06
NUCKS1-201ENST00000367142 EPHX3Q9H6B9 360 aa14.71□□□□□ -0.06
NUCKS1-201ENST00000367142 LRRC30A6NM36 301 aa14.7□□□□□ -0.06
NUCKS1-201ENST00000367142 KLRC4-KLRK1H3BQV0 150 aa14.7□□□□□ -0.06
NUCKS1-201ENST00000367142 PRAF2O60831 178 aa14.7□□□□□ -0.06
NUCKS1-201ENST00000367142 ZNF679Q8IYX0 411 aa14.7□□□□□ -0.06
NUCKS1-201ENST00000367142 BBS1Q8NFJ9 593 aa14.7□□□□□ -0.06
NUCKS1-201ENST00000367142 TMEM40Q8WWA1 233 aa14.7□□□□□ -0.06
NUCKS1-201ENST00000367142 TSSK2Q96PF2 358 aa14.7□□□□□ -0.06
NUCKS1-201ENST00000367142 WDR83Q9BRX9 315 aaKnown RBP14.7□□□□□ -0.06
NUCKS1-201ENST00000367142 CNOT11Q9UKZ1 510 aaKnown RBP14.7□□□□□ -0.06
NUCKS1-201ENST00000367142 CACNG2Q9Y698 323 aa14.7□□□□□ -0.06
NUCKS1-201ENST00000367142 GPR75O95800 540 aa14.7□□□□□ -0.06
NUCKS1-201ENST00000367142 CLDN17P56750 224 aa14.7□□□□□ -0.06
NUCKS1-201ENST00000367142 RPE65Q16518 533 aa14.7□□□□□ -0.06
NUCKS1-201ENST00000367142 LTC4SQ16873 150 aa14.7□□□□□ -0.06
NUCKS1-201ENST00000367142 PDLIM3Q53GG5 364 aaPredicted RBP14.7□□□□□ -0.06
NUCKS1-201ENST00000367142 NLKQ9UBE8 527 aa14.7□□□□□ -0.06
NUCKS1-201ENST00000367142 ATG4BQ9Y4P1 393 aa14.7□□□□□ -0.06
NUCKS1-201ENST00000367142 MITFO75030 526 aaPredicted RBP14.7□□□□□ -0.06
NUCKS1-201ENST00000367142 AFF3P51826 1226 aaKnown RBP14.7□□□□□ -0.06
NUCKS1-201ENST00000367142 GPR18Q14330 331 aa14.7□□□□□ -0.06
NUCKS1-201ENST00000367142 LETMD1Q6P1Q0 360 aa14.7□□□□□ -0.06
NUCKS1-201ENST00000367142 ADIPOR2Q86V24 386 aa14.7□□□□□ -0.06
NUCKS1-201ENST00000367142 FAM217AQ8IXS0 508 aa14.7□□□□□ -0.06
NUCKS1-201ENST00000367142 C7orf43Q8WVR3 580 aa14.7□□□□□ -0.06
NUCKS1-201ENST00000367142 ZNF566Q969W8 418 aa14.7□□□□□ -0.06
NUCKS1-201ENST00000367142 NMNAT2Q9BZQ4 307 aa14.7□□□□□ -0.06
NUCKS1-201ENST00000367142 OLAHQ9NV23 265 aa14.7□□□□□ -0.06
NUCKS1-201ENST00000367142 SLC23A2Q9UGH3 650 aa14.7□□□□□ -0.06
NUCKS1-201ENST00000367142 MRPS2Q9Y399 296 aaKnown RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms