RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 RASSF6Q6ZTQ3 369 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 USP30Q70CQ3 517 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 VN1R4Q7Z5H5 301 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 PAQR7Q86WK9 346 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 ZNF485Q8NCK3 441 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 ZCCHC14Q8WYQ9 949 aaKnown RBP6.76□□□□□ -1.33
CLCN3-202ENST00000360642 SLC25A46Q96AG3 418 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 TRMT61BQ9BVS5 477 aaKnown RBP6.76□□□□□ -1.33
CLCN3-202ENST00000360642 MCOLN1Q9GZU1 580 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 EXOSC4Q9NPD3 245 aaKnown RBP6.76□□□□□ -1.33
CLCN3-202ENST00000360642 ISYNA1Q9NPH2 558 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 TXNL4BQ9NX01 149 aaKnown RBP6.76□□□□□ -1.33
CLCN3-202ENST00000360642 LYARQ9NX58 379 aaKnown RBP6.76□□□□□ -1.33
CLCN3-202ENST00000360642 OR6C2Q9NZP2 312 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 CALML5Q9NZT1 146 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 TBC1D24Q9ULP9 559 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 SNX7Q9UNH6 387 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 HEBP2Q9Y5Z4 205 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 SNRNP200O75643 2136 aaKnown RBP6.76□□□□□ -1.33
CLCN3-202ENST00000360642 IL1AP01583 271 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 HPXP02790 462 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 THY1P04216 161 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 ALPPP05187 535 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 CHRM5P08912 532 aaPredicted RBP6.76□□□□□ -1.33
CLCN3-202ENST00000360642 TNFRSF4P43489 277 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 ADPRHP54922 357 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 WNT4P56705 351 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 STXBP1P61764 594 aaKnown RBP6.76□□□□□ -1.33
CLCN3-202ENST00000360642 PSPHP78330 225 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 TPBGQ13641 420 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 TRAM2Q15035 370 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 SLC36A4Q6YBV0 504 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 NCCRP1Q6ZVX7 275 aaPredicted RBP6.76□□□□□ -1.33
CLCN3-202ENST00000360642 NRROSQ86YC3 692 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 IL17RDQ8NFM7 739 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 NUDT10Q8NFP7 164 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 FLVCR1-AS1Q8TAF5 88 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 TM9SF4Q92544 642 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 NUDT11Q96G61 164 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 OR2A14Q96R47 310 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 ACTRT3Q9BYD9 372 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 C6orf106Q9H6K1 298 aaPredicted RBP6.76□□□□□ -1.33
CLCN3-202ENST00000360642 FGF22Q9HCT0 170 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 MUTYHQ9UIF7 546 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 SSR3Q9UNL2 185 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 CARD8Q9Y2G2 431 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 ZNF780BQ9Y6R6 833 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 COLEC10Q9Y6Z7 277 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 MDC1Q14676 2089 aaKnown RBP6.76□□□□□ -1.33
CLCN3-202ENST00000360642 IRGMA1A4Y4 181 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 PRR23AA6NEV1 266 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 FCMRO60667 390 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 NTN1O95631 604 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 EML2O95834 649 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 HOXC4P09017 264 aaPredicted RBP6.76□□□□□ -1.33
CLCN3-202ENST00000360642 SMIM10L1P0DMW3 83 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 MAGP20916 626 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 IFNGR2P38484 337 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 TMED10P49755 219 aaKnown RBP6.76□□□□□ -1.33
CLCN3-202ENST00000360642 TPTEP56180 551 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 DEFA1P59665 94 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 DEFA3P59666 94 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 BTN3A2P78410 334 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 ST3GAL3Q11203 375 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 LARS2Q15031 903 aaKnown RBP6.76□□□□□ -1.33
CLCN3-202ENST00000360642 LTB4RQ15722 352 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 ZNF79Q15937 498 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 ITPRIPL2Q3MIP1 535 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 PLK5Q496M5 336 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 ATAD3BQ5T9A4 648 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 UTS2BQ765I0 119 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 AMIGO1Q86WK6 493 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 MEX3DQ86XN8 651 aaKnown RBP6.76□□□□□ -1.33
CLCN3-202ENST00000360642 YAF2Q8IY57 180 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 CLDN22Q8N7P3 220 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 NT5CQ8TCD5 201 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 GPR151Q8TDV0 419 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 TM4SF19Q96DZ7 209 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 RNFT2Q96EX2 444 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 SMIM10Q96HG1 83 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 CEP19Q96LK0 163 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 KXD1Q9BQD3 176 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 MED18Q9BUE0 208 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 SNTG1Q9NSN8 517 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 GIMAP4Q9NUV9 329 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 IL20Q9NYY1 176 aa6.76□□□□□ -1.33
CLCN3-202ENST00000360642 CPSF4LA6NMK7 179 aaKnown RBP6.75□□□□□ -1.33
CLCN3-202ENST00000360642 NARSO43776 548 aaKnown RBP6.75□□□□□ -1.33
CLCN3-202ENST00000360642 BTF3P20290 206 aaKnown RBP6.75□□□□□ -1.33
CLCN3-202ENST00000360642 TGM4P49221 684 aa6.75□□□□□ -1.33
CLCN3-202ENST00000360642 PDX1P52945 283 aa6.75□□□□□ -1.33
CLCN3-202ENST00000360642 RPS15AP62244 130 aaKnown RBP6.75□□□□□ -1.33
CLCN3-202ENST00000360642 DECR1Q16698 335 aa6.75□□□□□ -1.33
CLCN3-202ENST00000360642 GLYR1Q49A26 553 aaPredicted RBP6.75□□□□□ -1.33
CLCN3-202ENST00000360642 FBXO42Q6P3S6 717 aa6.75□□□□□ -1.33
CLCN3-202ENST00000360642 FAM111BQ6SJ93 734 aa6.75□□□□□ -1.33
CLCN3-202ENST00000360642 KIAA1324Q6UXG2 1013 aaKnown RBP6.75□□□□□ -1.33
CLCN3-202ENST00000360642 FRRS1Q6ZNA5 592 aa6.75□□□□□ -1.33
CLCN3-202ENST00000360642 LAX1Q8IWV1 398 aa6.75□□□□□ -1.33
CLCN3-202ENST00000360642 OR7G2Q8NG99 324 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms