RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 E2F1Q01094 437 aa12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 ACY1Q03154 408 aa12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 SNTA1Q13424 505 aa12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 MADCAM1Q13477 382 aa12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 GRM7Q14831 915 aa12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 TRAM2Q15035 370 aa12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 DCST2Q5T1A1 773 aa12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 HES3Q5TGS1 186 aa12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 NXNL2Q5VZ03 156 aa12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 HMGN2P46Q86SG4 172 aa12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 GALNT12Q8IXK2 581 aa12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 OR8H2Q8N162 312 aa12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 VWA5B2Q8N398 1253 aa12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 AGBL5Q8NDL9 886 aa12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 OR4K5Q8NGD3 323 aa12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 EVA1AQ9H8M9 152 aa12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 ZNF221Q9UK13 617 aa12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 TMEM184BQ9Y519 407 aaPredicted RBP12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 FER1L5A0AVI2 2057 aa12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 H0YIG0 161 aa12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 DBIP07108 87 aaKnown RBP12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 CT62P0C5K7 136 aa12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 FTH1P19P0C7X4 201 aa12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 IL32P24001 234 aa12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 TGM4P49221 684 aa12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 MAT1AQ00266 395 aaKnown RBP12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 BIKQ13323 160 aa12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 ISXQ2M1V0 245 aa12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 COX18Q8N8Q8 333 aa12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 OR6F1Q8NGZ6 308 aa12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 DIO2Q92813 273 aa12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 SDHCQ99643 169 aaPredicted RBP12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 RBCK1Q9BYM8 510 aa12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 POLR2J2Q9GZM3 115 aaKnown RBP12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 CUTCQ9NTM9 273 aa12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 HCN3Q9P1Z3 774 aa12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 PCDHGA1Q9Y5H4 931 aa12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 A0A1W2PQ72 361 aa12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 RGS5O15539 181 aa12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 CSO75390 466 aaKnown RBP12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 NKX2-2O95096 273 aa12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 CCKBRP32239 447 aa12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 RGS8P57771 180 aaPredicted RBP12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 ZNF45Q02386 682 aa12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 PRKCDQ05655 676 aa12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 TRA2AQ13595 282 aaKnown RBP eCLIP12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 ZMAT1Q5H9K5 638 aa12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 SPANXN2Q5MJ10 180 aa12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 ENTPD8Q5MY95 495 aa12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 C1orf189Q5VU69 101 aa12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 PWWP2BQ6NUJ5 590 aa12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 MARCH9Q86YJ5 346 aa12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 BMPERQ8N8U9 685 aa12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 MMABQ96EY8 250 aaPredicted RBP12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 RBM18Q96H35 190 aaKnown RBP12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 CCDC120Q96HB5 630 aa12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 NEDD4LQ96PU5 975 aa12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 SNX18Q96RF0 628 aa12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 TTYH2Q9BSA4 534 aa12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 NXF2Q9GZY0 626 aaKnown RBP12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 PRTFDC1Q9NRG1 225 aa12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 PAQR5Q9NXK6 330 aaPredicted RBP12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 RARRES3Q9UL19 164 aa12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 GPR55Q9Y2T6 319 aaPredicted RBP12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 OR5F1O95221 314 aa12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 CBX7O95931 251 aa12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 HTR2BP41595 481 aa12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 OR1D4P47884 311 aa12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 B2MP61769 119 aa12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 SNRPGP62308 76 aaKnown RBP12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 EEF1A1P68104 462 aaKnown RBP12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 STX4Q12846 297 aa12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 EXOSC7Q15024 291 aaKnown RBP12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 CDCP2Q5VXM1 449 aa12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 C12orf73Q69YU5 71 aa12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 ZNF836Q6ZNA1 936 aa12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 ZER1Q7Z7L7 766 aa12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 FAM109AQ8N4B1 249 aa12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 SLC38A9Q8NBW4 561 aa12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 C7orf57Q8NEG2 295 aa12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 IL17RDQ8NFM7 739 aa12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 WDR36Q8NI36 951 aaKnown RBP12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 GNPDA2Q8TDQ7 276 aa12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 GPR151Q8TDV0 419 aa12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 PEX11GQ96HA9 241 aa12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 CEP19Q96LK0 163 aa12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 ZNF578Q96N58 590 aaPredicted RBP12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 LMF2Q9BU23 707 aaKnown RBP12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 CNPPD1Q9BV87 410 aa12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 CLN6Q9NWW5 311 aa12.79□□□□□ -0.36
CSNK1E-201ENST00000359867 LOC110117498-PIK3R3F6TDL0 507 aa12.78□□□□□ -0.36
CSNK1E-201ENST00000359867 TM4SF5O14894 197 aa12.78□□□□□ -0.36
CSNK1E-201ENST00000359867 TPST2O60704 377 aa12.78□□□□□ -0.36
CSNK1E-201ENST00000359867 MT-CO3P00414 261 aa12.78□□□□□ -0.36
CSNK1E-201ENST00000359867 S1PR1P21453 382 aa12.78□□□□□ -0.36
CSNK1E-201ENST00000359867 MMP11P24347 488 aa12.78□□□□□ -0.36
CSNK1E-201ENST00000359867 GALNSP34059 522 aa12.78□□□□□ -0.36
CSNK1E-201ENST00000359867 NOVA1P51513 510 aaKnown RBP12.78□□□□□ -0.36
CSNK1E-201ENST00000359867 HSD17B7P56937 341 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms