RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 C9orf62Q8N4C0 152 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 GALNT6Q8NCL4 622 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 OR52N1Q8NH53 320 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 FCAMRQ8WWV6 532 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 RERGQ96A58 199 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-203ENST00000358528 DERL3Q96Q80 235 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 TEAD3Q99594 435 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 SEMA4CQ9C0C4 833 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 OR52A5Q9H2C5 316 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 MTHFD2LQ9H903 347 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-203ENST00000358528 SPHK1Q9NYA1 384 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 ASB4Q9Y574 426 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 IER3IP1Q9Y5U9 82 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 FNDC1Q4ZHG4 1894 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-203ENST00000358528 A0A1W2PPL8 197 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 LGALS8O00214 317 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 MAN2B1O00754 1011 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 LIPCP11150 499 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 CEBPBP17676 345 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 HSD17B2P37059 387 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 NUP62P37198 522 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-203ENST00000358528 PCBP4P57723 403 aaKnown RBP6.11□□□□□ -1.43
CSDE1-203ENST00000358528 ERVFC1P60507 584 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 REEP5Q00765 189 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 TRMT12Q53H54 448 aaKnown RBP6.11□□□□□ -1.43
CSDE1-203ENST00000358528 ENPP7Q6UWV6 458 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 LRRC56Q8IYG6 542 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-203ENST00000358528 ZNF676Q8N7Q3 588 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 DUSP18Q8NEJ0 188 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 OR2L5Q8NG80 312 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 TSEN15Q8WW01 171 aaKnown RBP6.11□□□□□ -1.43
CSDE1-203ENST00000358528 S100A16Q96FQ6 103 aaKnown RBP6.11□□□□□ -1.43
CSDE1-203ENST00000358528 LRIG1Q96JA1 1093 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 ADAD1Q96M93 576 aaKnown RBP6.11□□□□□ -1.43
CSDE1-203ENST00000358528 FOXN4Q96NZ1 517 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 OR2M2Q96R28 347 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 NKX3-1Q99801 234 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-203ENST00000358528 ENKD1Q9H0I2 346 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 STARD5Q9NSY2 213 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 C20orf141Q9NUB4 165 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 ASB6Q9NWX5 421 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 AKAP7Q9P0M2 348 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-203ENST00000358528 COPS3Q9UNS2 423 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 SLC27A6Q9Y2P4 619 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 TP53BP1Q12888 1972 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-203ENST00000358528 CACNB4O00305 520 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-203ENST00000358528 CLEC3AO75596 197 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 KRT33AO76009 404 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 CTSAP10619 480 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 ANXA7P20073 488 aaKnown RBP6.1□□□□□ -1.43
CSDE1-203ENST00000358528 FPR3P25089 353 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 AP3S2P59780 193 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 OPCMLQ14982 345 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 ZNHIT3Q15649 155 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-203ENST00000358528 DUSP5Q16690 384 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 ST3GAL2Q16842 350 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 ZNF761Q86XN6 746 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-203ENST00000358528 FBXL6Q8N531 539 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 ZDHHC1Q8WTX9 485 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 MBNL1Q9NR56 388 aaKnown RBP6.1□□□□□ -1.43
CSDE1-203ENST00000358528 SF3B6Q9Y3B4 125 aaKnown RBP6.1□□□□□ -1.43
CSDE1-203ENST00000358528 KDM4EB2RXH2 506 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-203ENST00000358528 ZNF879B4DU55 563 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 OLFM2O95897 454 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 WNT1P04628 370 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 MAKP20794 623 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 TAS2R43P59537 309 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 FGL2Q14314 439 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 ARHGEF6Q15052 776 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 DUSP6Q16828 381 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 HNRNPA1L2Q32P51 320 aaKnown RBP6.1□□□□□ -1.43
CSDE1-203ENST00000358528 ALG10BQ5I7T1 473 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 LHX8Q68G74 356 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 NIPAL3Q6P499 406 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 ABHD17CQ6PCB6 329 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 C3P1Q6ZMU1 363 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 ZNF836Q6ZNA1 936 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 CFAP77Q6ZQR2 320 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 LINC01555Q8NAE3 123 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 OR7G2Q8NG99 324 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 OR11H4Q8NGC9 324 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 HCAR2Q8TDS4 363 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 THEM6Q8WUY1 208 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 MRPL48Q96GC5 212 aaKnown RBP6.1□□□□□ -1.43
CSDE1-203ENST00000358528 SFXN2Q96NB2 322 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 NOX3Q9HBY0 568 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 CYSLTR2Q9NS75 346 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 FBXL3Q9UKT7 428 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 GPR34Q9UPC5 381 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 A0A1B0GVI7 797 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 GPR171O14626 319 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 PRKNO60260 465 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-203ENST00000358528 CREBL2O60519 120 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-203ENST00000358528 OR6A2O95222 327 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 NFATC1O95644 943 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 PVRP15151 417 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 ATF1P18846 271 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 NPR2P20594 1047 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 SLC6A1P30531 599 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 SLC6A6P31641 620 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms