RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 SECTM1Q8WVN6 248 aa6.87□□□□□ -1.31
VPS13A-202ENST00000357409 KCNJ15Q99712 375 aa6.87□□□□□ -1.31
VPS13A-202ENST00000357409 PCDHGA5Q9Y5G8 931 aa6.87□□□□□ -1.31
VPS13A-202ENST00000357409 CNIH1O95406 144 aa6.87□□□□□ -1.31
VPS13A-202ENST00000357409 OR8G3PP0DMU2 310 aa6.87□□□□□ -1.31
VPS13A-202ENST00000357409 ORAI1Q96D31 301 aa6.87□□□□□ -1.31
VPS13A-202ENST00000357409 FBXO17Q96EF6 278 aa6.87□□□□□ -1.31
VPS13A-202ENST00000357409 TIMM29Q9BSF4 260 aa6.87□□□□□ -1.31
VPS13A-202ENST00000357409 SYT4Q9H2B2 425 aa6.87□□□□□ -1.31
VPS13A-202ENST00000357409 PAHP00439 452 aa6.87□□□□□ -1.31
VPS13A-202ENST00000357409 TACR3P29371 465 aa6.87□□□□□ -1.31
VPS13A-202ENST00000357409 FABP6P51161 128 aa6.87□□□□□ -1.31
VPS13A-202ENST00000357409 GPR18Q14330 331 aa6.87□□□□□ -1.31
VPS13A-202ENST00000357409 SMUG1Q53HV7 270 aa6.87□□□□□ -1.31
VPS13A-202ENST00000357409 SLC18B1Q6NT16 456 aa6.87□□□□□ -1.31
VPS13A-202ENST00000357409 LANCL3Q6ZV70 420 aa6.87□□□□□ -1.31
VPS13A-202ENST00000357409 FJX1Q86VR8 437 aa6.87□□□□□ -1.31
VPS13A-202ENST00000357409 TEX26Q8N6G2 289 aa6.87□□□□□ -1.31
VPS13A-202ENST00000357409 C19orf47Q8N9M1 422 aaKnown RBP6.87□□□□□ -1.31
VPS13A-202ENST00000357409 ROBO4Q8WZ75 1007 aa6.87□□□□□ -1.31
VPS13A-202ENST00000357409 ARL6Q9H0F7 186 aa6.87□□□□□ -1.31
VPS13A-202ENST00000357409 KIAA1210Q9ULL0 1709 aa6.87□□□□□ -1.31
VPS13A-202ENST00000357409 B3GNT3Q9Y2A9 372 aa6.87□□□□□ -1.31
VPS13A-202ENST00000357409 A0A1W2PRV1 198 aa6.87□□□□□ -1.31
VPS13A-202ENST00000357409 ARHGEF15O94989 841 aa6.87□□□□□ -1.31
VPS13A-202ENST00000357409 MT-ND2P03891 347 aa6.87□□□□□ -1.31
VPS13A-202ENST00000357409 PIGWQ7Z7B1 504 aa6.87□□□□□ -1.31
VPS13A-202ENST00000357409 OR5W2Q8NH69 310 aa6.87□□□□□ -1.31
VPS13A-202ENST00000357409 MVB12BQ9H7P6 319 aa6.87□□□□□ -1.31
VPS13A-202ENST00000357409 SIDT1Q9NXL6 827 aaKnown RBP6.87□□□□□ -1.31
VPS13A-202ENST00000357409 SNED1Q8TER0 1413 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 SERTM2A0A1B0GWG4 89 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 PRRT4C9JH25 899 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 ZNF593O00488 134 aaPredicted RBP6.86□□□□□ -1.31
VPS13A-202ENST00000357409 OR1Q1Q15612 314 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 LRIF1Q5T3J3 769 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 GAREM2Q75VX8 874 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 SLC35F2Q8IXU6 374 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 BPIFCQ8NFQ6 507 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 SPTSSAQ969W0 71 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 CHRDQ9H2X0 955 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 LRRN3Q9H3W5 708 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 CICQ96RK0 1608 aaPredicted RBP6.86□□□□□ -1.31
VPS13A-202ENST00000357409 CCL2P13500 99 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 HTR7P34969 479 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 TM4SF4P48230 202 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 ADARB1P78563 741 aaKnown RBP6.86□□□□□ -1.31
VPS13A-202ENST00000357409 ACKR1Q16570 336 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 BRICD5Q6PL45 260 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 OR4C15Q8NGM1 316 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 ZNF480Q8WV37 535 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 OR1E3Q8WZA6 343 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 RGCCQ9H4X1 137 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 ETAA1Q9NY74 926 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 ZIM2Q9NZV7 527 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 SLC23A2Q9UGH3 650 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 OR2J3O76001 311 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 HLA-DPB1P04440 258 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 IKZF1Q13422 519 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 ZNF813Q6ZN06 617 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 PAQR8Q8TEZ7 354 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 CLDN24A6NM45 220 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 HPGDSO60760 199 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 PMP2P02689 132 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 LCN1P31025 176 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 SLC14A1Q13336 389 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 TCTE1Q5JU00 501 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 ATPAF1Q5TC12 328 aaPredicted RBP6.86□□□□□ -1.31
VPS13A-202ENST00000357409 STEAP4Q687X5 459 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 PODNL1Q6PEZ8 512 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 TMEM150AQ86TG1 271 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 ZDHHC5Q9C0B5 715 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 PAK6Q9NQU5 681 aaPredicted RBP6.86□□□□□ -1.31
VPS13A-202ENST00000357409 TMEM184CQ9NVA4 438 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 TXNDC12O95881 172 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 ANXA3P12429 323 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 SSTR2P30874 369 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 ERVK-16P61578 105 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 TMEM240Q5SV17 173 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 SFTPA1Q8IWL2 248 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 ZNF679Q8IYX0 411 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 Q8N402 240 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 ZADH2Q8N4Q0 377 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 OR4K5Q8NGD3 323 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 ASB9Q96DX5 294 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 NECTIN4Q96NY8 510 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 SLC2A13Q96QE2 648 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 PPIL3Q9H2H8 161 aaKnown RBP6.86□□□□□ -1.31
VPS13A-202ENST00000357409 LRFN1Q9P244 771 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 PCDHGB1Q9Y5G3 927 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 ABCA9Q8IUA7 1624 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 FTCDNL1E5RQL4 147 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 INMT-MINDY4F8WBC2 141 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 H3BMH7 237 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 TOR1AO14656 332 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 DCDP81605 110 aaKnown RBP6.86□□□□□ -1.31
VPS13A-202ENST00000357409 TRMT12Q53H54 448 aaKnown RBP6.86□□□□□ -1.31
VPS13A-202ENST00000357409 FAM109BQ6ICB4 259 aaPredicted RBP6.86□□□□□ -1.31
VPS13A-202ENST00000357409 AGBL5Q8NDL9 886 aa6.86□□□□□ -1.31
VPS13A-202ENST00000357409 TBC1D20Q96BZ9 403 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms