RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 KIR2DS3Q14952 304 aa18.09■□□□□ 0.49
COL13A1-201ENST00000354547 TP53I3Q53FA7 332 aa18.09■□□□□ 0.49
COL13A1-201ENST00000354547 SMPDL3BQ92485 455 aa18.09■□□□□ 0.49
COL13A1-201ENST00000354547 SMIM10Q96HG1 83 aa18.09■□□□□ 0.49
COL13A1-201ENST00000354547 TMEM27Q9HBJ8 222 aa18.09■□□□□ 0.49
COL13A1-201ENST00000354547 TDRD6O60522 2096 aaKnown RBP18.09■□□□□ 0.49
COL13A1-201ENST00000354547 INMT-MINDY4F8WBC2 141 aa18.09■□□□□ 0.49
COL13A1-201ENST00000354547 AKR7A2O43488 359 aa18.09■□□□□ 0.49
COL13A1-201ENST00000354547 THBS1P07996 1170 aa18.09■□□□□ 0.49
COL13A1-201ENST00000354547 TFPIP10646 304 aa18.09■□□□□ 0.49
COL13A1-201ENST00000354547 TYRP1P17643 537 aa18.09■□□□□ 0.49
COL13A1-201ENST00000354547 NAA10P41227 235 aaPredicted RBP18.09■□□□□ 0.49
COL13A1-201ENST00000354547 CDRT4Q8N9R6 151 aa18.09■□□□□ 0.49
COL13A1-201ENST00000354547 OR4K13Q8NH42 304 aa18.09■□□□□ 0.49
COL13A1-201ENST00000354547 TCEAL2Q9H3H9 227 aaPredicted RBP18.09■□□□□ 0.49
COL13A1-201ENST00000354547 FN3KQ9H479 309 aa18.09■□□□□ 0.49
COL13A1-201ENST00000354547 CMC2Q9NRP2 79 aa18.09■□□□□ 0.49
COL13A1-201ENST00000354547 HRASLS2Q9NWW9 162 aa18.09■□□□□ 0.49
COL13A1-201ENST00000354547 YBX2Q9Y2T7 364 aaKnown RBP18.09■□□□□ 0.49
COL13A1-201ENST00000354547 PRKNO60260 465 aaPredicted RBP18.08■□□□□ 0.49
COL13A1-201ENST00000354547 OR10H2O60403 315 aa18.08■□□□□ 0.49
COL13A1-201ENST00000354547 RDH16O75452 317 aa18.08■□□□□ 0.49
COL13A1-201ENST00000354547 EMDP50402 254 aa18.08■□□□□ 0.49
COL13A1-201ENST00000354547 PLAURQ03405 335 aa18.08■□□□□ 0.49
COL13A1-201ENST00000354547 SF3A2Q15428 464 aaKnown RBP18.08■□□□□ 0.49
COL13A1-201ENST00000354547 NDUFAF6Q330K2 333 aa18.08■□□□□ 0.49
COL13A1-201ENST00000354547 FHL5Q5TD97 284 aa18.08■□□□□ 0.49
COL13A1-201ENST00000354547 GPR135Q8IZ08 494 aa18.08■□□□□ 0.49
COL13A1-201ENST00000354547 SDR9C7Q8NEX9 313 aa18.08■□□□□ 0.49
COL13A1-201ENST00000354547 OR52R1Q8NGF1 315 aa18.08■□□□□ 0.49
COL13A1-201ENST00000354547 ABHD4Q8TB40 342 aa18.08■□□□□ 0.49
COL13A1-201ENST00000354547 THAP7Q9BT49 309 aaPredicted RBP18.08■□□□□ 0.49
COL13A1-201ENST00000354547 ZMIZ1Q9ULJ6 1067 aa18.08■□□□□ 0.49
COL13A1-201ENST00000354547 LYPD3O95274 346 aa18.08■□□□□ 0.48
COL13A1-201ENST00000354547 GPR75O95800 540 aa18.08■□□□□ 0.48
COL13A1-201ENST00000354547 TRAPPC2P0DI81 140 aa18.08■□□□□ 0.48
COL13A1-201ENST00000354547 TRAPPC2BP0DI82 140 aa18.08■□□□□ 0.48
COL13A1-201ENST00000354547 ARSBP15848 533 aa18.08■□□□□ 0.48
COL13A1-201ENST00000354547 ZNF10P21506 573 aaPredicted RBP18.08■□□□□ 0.48
COL13A1-201ENST00000354547 CRYZQ08257 329 aaKnown RBP18.08■□□□□ 0.48
COL13A1-201ENST00000354547 GPR176Q14439 515 aa18.08■□□□□ 0.48
COL13A1-201ENST00000354547 SFXN4Q6P4A7 337 aa18.08■□□□□ 0.48
COL13A1-201ENST00000354547 SLC44A3Q8N4M1 653 aa18.08■□□□□ 0.48
COL13A1-201ENST00000354547 TOR1AIP2Q8NFQ8 470 aa18.08■□□□□ 0.48
COL13A1-201ENST00000354547 SCARF2Q96GP6 870 aaPredicted RBP18.08■□□□□ 0.48
COL13A1-201ENST00000354547 ABCG5Q9H222 651 aa18.08■□□□□ 0.48
COL13A1-201ENST00000354547 WSB2Q9NYS7 404 aaPredicted RBP18.08■□□□□ 0.48
COL13A1-201ENST00000354547 FLRT3Q9NZU0 649 aa18.08■□□□□ 0.48
COL13A1-201ENST00000354547 SPACA6W5XKT8 324 aa18.08■□□□□ 0.48
COL13A1-201ENST00000354547 SLC19A2O60779 497 aa18.07■□□□□ 0.48
COL13A1-201ENST00000354547 SBK2P0C263 348 aa18.07■□□□□ 0.48
COL13A1-201ENST00000354547 EVI2BP34910 448 aa18.07■□□□□ 0.48
COL13A1-201ENST00000354547 HBMQ6B0K9 141 aa18.07■□□□□ 0.48
COL13A1-201ENST00000354547 METAP1DQ6UB28 335 aaPredicted RBP18.07■□□□□ 0.48
COL13A1-201ENST00000354547 ESPNLQ6ZVH7 1005 aa18.07■□□□□ 0.48
COL13A1-201ENST00000354547 FAM98AQ8NCA5 519 aaKnown RBP18.07■□□□□ 0.48
COL13A1-201ENST00000354547 OR52E2Q8NGJ4 325 aa18.07■□□□□ 0.48
COL13A1-201ENST00000354547 ZFP3Q96NJ6 502 aa18.07■□□□□ 0.48
COL13A1-201ENST00000354547 ERMAPQ96PL5 475 aaPredicted RBP18.07■□□□□ 0.48
COL13A1-201ENST00000354547 CCDC3Q9BQI4 270 aa18.07■□□□□ 0.48
COL13A1-201ENST00000354547 MTIF3Q9H2K0 278 aaKnown RBP18.07■□□□□ 0.48
COL13A1-201ENST00000354547 PILRAQ9UKJ1 303 aa18.07■□□□□ 0.48
COL13A1-201ENST00000354547 A0A1B0GWA3 101 aa18.07■□□□□ 0.48
COL13A1-201ENST00000354547 SLC9B1P1A6NJY1 282 aa18.07■□□□□ 0.48
COL13A1-201ENST00000354547 SLC22A31A6NKX4 558 aa18.07■□□□□ 0.48
COL13A1-201ENST00000354547 ORC5O43913 435 aa18.07■□□□□ 0.48
COL13A1-201ENST00000354547 HLA-DQB1P01920 261 aa18.07■□□□□ 0.48
COL13A1-201ENST00000354547 NGFRP08138 427 aa18.07■□□□□ 0.48
COL13A1-201ENST00000354547 MTNR1BP49286 362 aa18.07■□□□□ 0.48
COL13A1-201ENST00000354547 SRP54P61011 504 aaKnown RBP18.07■□□□□ 0.48
COL13A1-201ENST00000354547 PRICKLE4Q2TBC4 344 aa18.07■□□□□ 0.48
COL13A1-201ENST00000354547 TRMT10AQ8TBZ6 339 aaKnown RBP18.07■□□□□ 0.48
COL13A1-201ENST00000354547 GHSRQ92847 366 aa18.07■□□□□ 0.48
COL13A1-201ENST00000354547 NCKAP1Q9Y2A7 1128 aa18.07■□□□□ 0.48
COL13A1-201ENST00000354547 LAMA1P25391 3075 aa18.07■□□□□ 0.48
COL13A1-201ENST00000354547 HRKO00198 91 aa18.07■□□□□ 0.48
COL13A1-201ENST00000354547 CELA2BP08218 269 aaPredicted RBP18.07■□□□□ 0.48
COL13A1-201ENST00000354547 HLA-DMAP28067 261 aa18.07■□□□□ 0.48
COL13A1-201ENST00000354547 ERV3-1Q14264 604 aa18.07■□□□□ 0.48
COL13A1-201ENST00000354547 ACSM3Q53FZ2 586 aa18.07■□□□□ 0.48
COL13A1-201ENST00000354547 DUSP18Q8NEJ0 188 aa18.07■□□□□ 0.48
COL13A1-201ENST00000354547 OR5M3Q8NGP4 307 aa18.07■□□□□ 0.48
COL13A1-201ENST00000354547 OR9A4Q8NGU2 314 aa18.07■□□□□ 0.48
COL13A1-201ENST00000354547 ORAI1Q96D31 301 aa18.07■□□□□ 0.48
COL13A1-201ENST00000354547 ADGRL4Q9HBW9 690 aa18.07■□□□□ 0.48
COL13A1-201ENST00000354547 FANCMQ8IYD8 2048 aa18.06■□□□□ 0.48
COL13A1-201ENST00000354547 PSMD9O00233 223 aa18.06■□□□□ 0.48
COL13A1-201ENST00000354547 IMPA2O14732 288 aa18.06■□□□□ 0.48
COL13A1-201ENST00000354547 FAM157BP0CG42 384 aa18.06■□□□□ 0.48
COL13A1-201ENST00000354547 ZNF3P17036 446 aa18.06■□□□□ 0.48
COL13A1-201ENST00000354547 F8A1P23610 371 aa18.06■□□□□ 0.48
COL13A1-201ENST00000354547 CLDN20P56880 219 aa18.06■□□□□ 0.48
COL13A1-201ENST00000354547 ZNF85Q03923 595 aa18.06■□□□□ 0.48
COL13A1-201ENST00000354547 FAPQ12884 760 aa18.06■□□□□ 0.48
COL13A1-201ENST00000354547 ALG11Q2TAA5 492 aa18.06■□□□□ 0.48
COL13A1-201ENST00000354547 BCL2L15Q5TBC7 163 aa18.06■□□□□ 0.48
COL13A1-201ENST00000354547 GARNL3Q5VVW2 1013 aa18.06■□□□□ 0.48
COL13A1-201ENST00000354547 NANOGNBQ7Z5D8 188 aa18.06■□□□□ 0.48
COL13A1-201ENST00000354547 RNF113BQ8IZP6 322 aaKnown RBP18.06■□□□□ 0.48
COL13A1-201ENST00000354547 LRRC17Q8N6Y2 441 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms