RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 ZNF91Q05481 1191 aa12.41□□□□□ -0.42
CDC42-202ENST00000344548 GXYLT1Q4G148 440 aa12.41□□□□□ -0.42
CDC42-202ENST00000344548 OR5M10Q6IEU7 315 aa12.41□□□□□ -0.42
CDC42-202ENST00000344548 SLC16A12Q6ZSM3 486 aa12.41□□□□□ -0.42
CDC42-202ENST00000344548 TIPARPQ7Z3E1 657 aaKnown RBP12.41□□□□□ -0.42
CDC42-202ENST00000344548 FAM26EQ8N5C1 309 aa12.41□□□□□ -0.42
CDC42-202ENST00000344548 TMCO5AQ8N6Q1 288 aa12.41□□□□□ -0.42
CDC42-202ENST00000344548 BBS1Q8NFJ9 593 aa12.41□□□□□ -0.42
CDC42-202ENST00000344548 RELTQ969Z4 430 aa12.41□□□□□ -0.42
CDC42-202ENST00000344548 DNAJA3Q96EY1 480 aa12.41□□□□□ -0.42
CDC42-202ENST00000344548 ZNF582Q96NG8 517 aaPredicted RBP12.41□□□□□ -0.42
CDC42-202ENST00000344548 DEPDC7Q96QD5 511 aa12.41□□□□□ -0.42
CDC42-202ENST00000344548 TNFRSF13CQ96RJ3 184 aa12.41□□□□□ -0.42
CDC42-202ENST00000344548 TSC22D3Q99576 134 aa12.41□□□□□ -0.42
CDC42-202ENST00000344548 LPAR4Q99677 370 aa12.41□□□□□ -0.42
CDC42-202ENST00000344548 CMKLR1Q99788 373 aa12.41□□□□□ -0.42
CDC42-202ENST00000344548 FUNDC2Q9BWH2 189 aa12.41□□□□□ -0.42
CDC42-202ENST00000344548 PARD6AQ9NPB6 346 aa12.41□□□□□ -0.42
CDC42-202ENST00000344548 CLEC2DQ9UHP7 191 aa12.41□□□□□ -0.42
CDC42-202ENST00000344548 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.41□□□□□ -0.422e-8■□□□□ 8.7
CDC42-202ENST00000344548 LOXL2Q9Y4K0 774 aa12.41□□□□□ -0.42
CDC42-202ENST00000344548 NPFFR2Q9Y5X5 522 aa12.41□□□□□ -0.42
CDC42-202ENST00000344548 CDH10Q9Y6N8 788 aa12.41□□□□□ -0.42
CDC42-202ENST00000344548 COMMD3-BMI1R4GMX3 469 aa12.41□□□□□ -0.42
CDC42-202ENST00000344548 AHCTF1Q8WYP5 2266 aa12.41□□□□□ -0.42
CDC42-202ENST00000344548 ASPMQ8IZT6 3477 aa12.41□□□□□ -0.42
CDC42-202ENST00000344548 A0A087WUJ7 227 aa12.41□□□□□ -0.42
CDC42-202ENST00000344548 FAM183AA6NL82 134 aa12.41□□□□□ -0.42
CDC42-202ENST00000344548 GTPBP1O00178 669 aaKnown RBP12.41□□□□□ -0.42
CDC42-202ENST00000344548 SURF4O15260 269 aa12.41□□□□□ -0.42
CDC42-202ENST00000344548 SCO2O43819 266 aa12.41□□□□□ -0.42
CDC42-202ENST00000344548 FADS1O60427 444 aa12.41□□□□□ -0.42
CDC42-202ENST00000344548 MPZL2O60487 215 aa12.41□□□□□ -0.42
CDC42-202ENST00000344548 PTP4A3O75365 173 aa12.41□□□□□ -0.42
CDC42-202ENST00000344548 NADKO95544 446 aaPredicted RBP12.41□□□□□ -0.42
CDC42-202ENST00000344548 KLK3P07288 261 aaPredicted RBP12.41□□□□□ -0.42
CDC42-202ENST00000344548 SAGP10523 405 aaPredicted RBP12.41□□□□□ -0.42
CDC42-202ENST00000344548 PEX19P40855 299 aa12.41□□□□□ -0.42
CDC42-202ENST00000344548 CSNK2BP67870 215 aa12.41□□□□□ -0.42
CDC42-202ENST00000344548 SLC35F1Q5T1Q4 408 aa12.41□□□□□ -0.42
CDC42-202ENST00000344548 BICRALQ6AI39 1079 aa12.41□□□□□ -0.42
CDC42-202ENST00000344548 FCRLBQ6BAA4 426 aa12.41□□□□□ -0.42
CDC42-202ENST00000344548 B3GLCTQ6Y288 498 aa12.41□□□□□ -0.42
CDC42-202ENST00000344548 ZNF527Q8NB42 609 aa12.41□□□□□ -0.42
CDC42-202ENST00000344548 TRUB1Q8WWH5 349 aaKnown RBP12.41□□□□□ -0.42
CDC42-202ENST00000344548 SLC35B4Q969S0 331 aa12.41□□□□□ -0.42
CDC42-202ENST00000344548 HSPBAP1Q96EW2 488 aa12.41□□□□□ -0.42
CDC42-202ENST00000344548 HS6ST2Q96MM7 605 aa12.41□□□□□ -0.42
CDC42-202ENST00000344548 NPAS1Q99742 590 aa12.41□□□□□ -0.42
CDC42-202ENST00000344548 HOXD1Q9GZZ0 328 aa12.41□□□□□ -0.42
CDC42-202ENST00000344548 PTRH2Q9Y3E5 179 aaKnown RBP12.41□□□□□ -0.42
CDC42-202ENST00000344548 SH3D21A4FU49 640 aa12.4□□□□□ -0.42
CDC42-202ENST00000344548 M0R082 166 aa12.4□□□□□ -0.42
CDC42-202ENST00000344548 BHLHE40O14503 412 aa12.4□□□□□ -0.42
CDC42-202ENST00000344548 HCRTR2O43614 444 aa12.4□□□□□ -0.42
CDC42-202ENST00000344548 DBTP11182 482 aaKnown RBP12.4□□□□□ -0.42
CDC42-202ENST00000344548 PSMB9P28065 219 aa12.4□□□□□ -0.42
CDC42-202ENST00000344548 PNLIPRP2P54317 469 aa12.4□□□□□ -0.42
CDC42-202ENST00000344548 GAS1P54826 345 aa12.4□□□□□ -0.42
CDC42-202ENST00000344548 RPS18P62269 152 aaKnown RBP12.4□□□□□ -0.42
CDC42-202ENST00000344548 IRF3Q14653 427 aa12.4□□□□□ -0.42
CDC42-202ENST00000344548 PCOLCEQ15113 449 aa12.4□□□□□ -0.42
CDC42-202ENST00000344548 OCLNQ16625 522 aa12.4□□□□□ -0.42
CDC42-202ENST00000344548 ISXQ2M1V0 245 aa12.4□□□□□ -0.42
CDC42-202ENST00000344548 PGGHGQ32M88 737 aa12.4□□□□□ -0.42
CDC42-202ENST00000344548 SYT6Q5T7P8 510 aaPredicted RBP12.4□□□□□ -0.42
CDC42-202ENST00000344548 SMARCD3Q6STE5 483 aa12.4□□□□□ -0.42
CDC42-202ENST00000344548 PAQR6Q6TCH4 344 aa12.4□□□□□ -0.42
CDC42-202ENST00000344548 C17orf47Q8NEP4 570 aa12.4□□□□□ -0.42
CDC42-202ENST00000344548 TMEM163Q8TC26 289 aa12.4□□□□□ -0.42
CDC42-202ENST00000344548 RORBQ92753 470 aa12.4□□□□□ -0.42
CDC42-202ENST00000344548 DOK1Q99704 481 aa12.4□□□□□ -0.42
CDC42-202ENST00000344548 CCNB1IP1Q9NPC3 277 aa12.4□□□□□ -0.42
CDC42-202ENST00000344548 WARS2Q9UGM6 360 aaKnown RBP12.4□□□□□ -0.42
CDC42-202ENST00000344548 ICAM5Q9UMF0 924 aa12.4□□□□□ -0.42
CDC42-202ENST00000344548 EXPH5Q8NEV8 1989 aa12.4□□□□□ -0.42
CDC42-202ENST00000344548 ALG1L2C9J202 215 aa12.4□□□□□ -0.42
CDC42-202ENST00000344548 EGR4Q05215 589 aa12.4□□□□□ -0.42
CDC42-202ENST00000344548 AQP6Q13520 282 aa12.4□□□□□ -0.42
CDC42-202ENST00000344548 NCF4Q15080 339 aa12.4□□□□□ -0.42
CDC42-202ENST00000344548 ZNF362Q5T0B9 420 aaPredicted RBP12.4□□□□□ -0.42
CDC42-202ENST00000344548 B3GNT6Q6ZMB0 384 aa12.4□□□□□ -0.42
CDC42-202ENST00000344548 RAB11FIP2Q7L804 512 aa12.4□□□□□ -0.42
CDC42-202ENST00000344548 SHFQ7M4L6 423 aa12.4□□□□□ -0.42
CDC42-202ENST00000344548 STX19Q8N4C7 294 aa12.4□□□□□ -0.42
CDC42-202ENST00000344548 FANK1Q8TC84 345 aa12.4□□□□□ -0.42
CDC42-202ENST00000344548 BRIX1Q8TDN6 353 aaKnown RBP12.4□□□□□ -0.42
CDC42-202ENST00000344548 OSTF1Q92882 214 aa12.4□□□□□ -0.42
CDC42-202ENST00000344548 VMP1Q96GC9 406 aa12.4□□□□□ -0.42
CDC42-202ENST00000344548 MPP4Q96JB8 637 aa12.4□□□□□ -0.42
CDC42-202ENST00000344548 LRFN5Q96NI6 719 aa12.4□□□□□ -0.42
CDC42-202ENST00000344548 OR5M11Q96RB7 305 aa12.4□□□□□ -0.42
CDC42-202ENST00000344548 DCUN1D5Q9BTE7 237 aa12.4□□□□□ -0.42
CDC42-202ENST00000344548 HCAR1Q9BXC0 346 aa12.4□□□□□ -0.42
CDC42-202ENST00000344548 MCCC2Q9HCC0 563 aa12.4□□□□□ -0.42
CDC42-202ENST00000344548 GALNT9Q9HCQ5 603 aa12.4□□□□□ -0.42
CDC42-202ENST00000344548 VCX3AQ9NNX9 186 aa12.4□□□□□ -0.42
CDC42-202ENST00000344548 RPS6KB2Q9UBS0 482 aa12.4□□□□□ -0.42
CDC42-202ENST00000344548 PISDQ9UG56 409 aa12.4□□□□□ -0.42
CDC42-202ENST00000344548 MRTO4Q9UKD2 239 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms