RNA–Protein interactions for RNA: ENST00000340473.7

GTF2F2-201, Transcript of general transcription factor IIF subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F2, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F2-201ENST00000340473 ZNF563Q8TA94 476 aa12.14□□□□□ -0.47
GTF2F2-201ENST00000340473 TMEM255BQ8WV15 326 aa12.14□□□□□ -0.47
GTF2F2-201ENST00000340473 HAS2Q92819 552 aa12.14□□□□□ -0.47
GTF2F2-201ENST00000340473 C3orf49Q96BT1 292 aa12.14□□□□□ -0.47
GTF2F2-201ENST00000340473 PRSS27Q9BQR3 290 aa12.14□□□□□ -0.47
GTF2F2-201ENST00000340473 C9orf16Q9BUW7 83 aa12.14□□□□□ -0.47
GTF2F2-201ENST00000340473 EI24O14681 340 aa12.14□□□□□ -0.47
GTF2F2-201ENST00000340473 SNPHO15079 494 aa12.14□□□□□ -0.47
GTF2F2-201ENST00000340473 TRIM3O75382 744 aaPredicted RBP12.14□□□□□ -0.47
GTF2F2-201ENST00000340473 UQCRBP14927 111 aa12.14□□□□□ -0.47
GTF2F2-201ENST00000340473 ZNF26P17031 533 aaPredicted RBP12.14□□□□□ -0.47
GTF2F2-201ENST00000340473 PGCP20142 388 aa12.14□□□□□ -0.47
GTF2F2-201ENST00000340473 PTNP21246 168 aa12.14□□□□□ -0.47
GTF2F2-201ENST00000340473 IFNA8P32881 189 aa12.14□□□□□ -0.47
GTF2F2-201ENST00000340473 SUMO3P55854 103 aaPredicted RBP12.14□□□□□ -0.47
GTF2F2-201ENST00000340473 ARG2P78540 354 aa12.14□□□□□ -0.47
GTF2F2-201ENST00000340473 QPRTQ15274 297 aa12.14□□□□□ -0.47
GTF2F2-201ENST00000340473 MICAQ29983 383 aa12.14□□□□□ -0.47
GTF2F2-201ENST00000340473 ALG10BQ5I7T1 473 aa12.14□□□□□ -0.47
GTF2F2-201ENST00000340473 DCST1Q5T197 706 aa12.14□□□□□ -0.47
GTF2F2-201ENST00000340473 IGFL2Q6UWQ7 119 aa12.14□□□□□ -0.47
GTF2F2-201ENST00000340473 HIPK1Q86Z02 1210 aa12.14□□□□□ -0.47
GTF2F2-201ENST00000340473 FADS6Q8N9I5 356 aa12.14□□□□□ -0.47
GTF2F2-201ENST00000340473 RNF217Q8TC41 542 aa12.14□□□□□ -0.47
GTF2F2-201ENST00000340473 NRBF2Q96F24 287 aa12.14□□□□□ -0.47
GTF2F2-201ENST00000340473 JSRP1Q96MG2 331 aaPredicted RBP12.14□□□□□ -0.47
GTF2F2-201ENST00000340473 KLHL4Q9C0H6 718 aa12.14□□□□□ -0.47
GTF2F2-201ENST00000340473 RPS6KB2Q9UBS0 482 aa12.14□□□□□ -0.47
GTF2F2-201ENST00000340473 CSAG2Q9Y5P2 127 aa12.14□□□□□ -0.47
GTF2F2-201ENST00000340473 MGAQ8IWI9 3026 aa12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 SH3PXD2BA1X283 911 aa12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 CDK2AP1O14519 115 aa12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 CHP2O43745 196 aa12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 SNX4O95219 450 aa12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 RASAL1O95294 804 aa12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 THRBP10828 461 aa12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 MSX1P28360 303 aa12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 SLC1A3P43003 542 aa12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 MASP1P48740 699 aa12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 ARHGDIAP52565 204 aa12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 ULK3Q6PHR2 472 aa12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 PLCZ1Q86YW0 608 aa12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 GALNT4Q8N4A0 578 aa12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 CATSPER1Q8NEC5 780 aa12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 OR9Q2Q8NGE9 314 aa12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 GIPC3Q8TF64 312 aa12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 TMEM41AQ96HV5 264 aa12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 GNRHR2Q96P88 292 aa12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 SMAD5Q99717 465 aaKnown RBP12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 NPAS1Q99742 590 aa12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 GABARAPL1Q9H0R8 117 aa12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 ANKRD19PQ9H560 264 aa12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 SMURF2Q9HAU4 748 aa12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 TMCC3Q9ULS5 477 aa12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 LRCH1Q9Y2L9 728 aa12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 A0A087WUU8 490 aa12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 PINLYPA6NC86 204 aa12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 PEX1O43933 1283 aa12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 CCNB2O95067 398 aa12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 CNR1P21554 472 aa12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 TMPRSS3P57727 454 aa12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 GK3PQ14409 553 aa12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 TIGD3Q6B0B8 471 aa12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 ZNF770Q6IQ21 691 aaPredicted RBP12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 PPP4R4Q6NUP7 873 aa12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 OR10G2Q8NGC3 310 aa12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 OR4K17Q8NGC6 315 aa12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 OR1J4Q8NGS1 313 aa12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 DNAJA4Q8WW22 397 aaPredicted RBP12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 SLC38A4Q969I6 547 aa12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 SDCCAG3Q96C92 435 aa12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 KLHL1Q9NR64 748 aa12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 MED17Q9NVC6 651 aa12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 TUBA8Q9NY65 449 aaPredicted RBP12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 TAS2R10Q9NYW0 307 aa12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 VDAC3Q9Y277 283 aa12.13□□□□□ -0.47
GTF2F2-201ENST00000340473 LRRC3CA6NJW4 275 aa12.12□□□□□ -0.47
GTF2F2-201ENST00000340473 TACR3P29371 465 aa12.12□□□□□ -0.47
GTF2F2-201ENST00000340473 CD97P48960 835 aa12.12□□□□□ -0.47
GTF2F2-201ENST00000340473 PPP2R2BQ00005 443 aa12.12□□□□□ -0.47
GTF2F2-201ENST00000340473 LINC00114Q6XXX2 140 aa12.12□□□□□ -0.47
GTF2F2-201ENST00000340473 ATG4DQ86TL0 474 aaPredicted RBP12.12□□□□□ -0.47
GTF2F2-201ENST00000340473 OR4K5Q8NGD3 323 aa12.12□□□□□ -0.47
GTF2F2-201ENST00000340473 MAGEE2Q8TD90 523 aaPredicted RBP12.12□□□□□ -0.47
GTF2F2-201ENST00000340473 ZCCHC14Q8WYQ9 949 aaKnown RBP12.12□□□□□ -0.47
GTF2F2-201ENST00000340473 SLC39A7Q92504 469 aa12.12□□□□□ -0.47
GTF2F2-201ENST00000340473 OSBPL10Q9BXB5 764 aa12.12□□□□□ -0.47
GTF2F2-201ENST00000340473 ADAM19Q9H013 955 aa12.12□□□□□ -0.47
GTF2F2-201ENST00000340473 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.12□□□□□ -0.47
GTF2F2-201ENST00000340473 CHD8Q9HCK8 2581 aa12.12□□□□□ -0.47
GTF2F2-201ENST00000340473 ANKRD11Q6UB99 2663 aaPredicted RBP12.12□□□□□ -0.47
GTF2F2-201ENST00000340473 A0A087WV48 116 aa12.11□□□□□ -0.47
GTF2F2-201ENST00000340473 A6NHS1 94 aa12.11□□□□□ -0.47
GTF2F2-201ENST00000340473 PIP5K1CO60331 668 aa12.11□□□□□ -0.47
GTF2F2-201ENST00000340473 NME2P1O60361 137 aa12.11□□□□□ -0.47
GTF2F2-201ENST00000340473 ALPLP05186 524 aa12.11□□□□□ -0.47
GTF2F2-201ENST00000340473 SP1P08047 785 aa12.11□□□□□ -0.47
GTF2F2-201ENST00000340473 GP1BBP13224 206 aa12.11□□□□□ -0.47
GTF2F2-201ENST00000340473 PRKCAP17252 672 aa12.11□□□□□ -0.47
GTF2F2-201ENST00000340473 NME2P22392 152 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms