RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 METAP1DQ6UB28 335 aaPredicted RBP13.35□□□□□ -0.27
CPSF7-201ENST00000340437 ENPP7Q6UWV6 458 aa13.35□□□□□ -0.27
CPSF7-201ENST00000340437 CHMP1BQ7LBR1 199 aa13.35□□□□□ -0.27
CPSF7-201ENST00000340437 GALNT6Q8NCL4 622 aa13.35□□□□□ -0.27
CPSF7-201ENST00000340437 OR14A2Q96R54 314 aa13.35□□□□□ -0.27
CPSF7-201ENST00000340437 SRMSQ9H3Y6 488 aa13.35□□□□□ -0.27
CPSF7-201ENST00000340437 CYSLTR2Q9NS75 346 aa13.35□□□□□ -0.27
CPSF7-201ENST00000340437 CES1P1Q9UKY3 287 aa13.35□□□□□ -0.27
CPSF7-201ENST00000340437 CXorf51AA0A1B0GTR3 108 aa13.34□□□□□ -0.27
CPSF7-201ENST00000340437 OR2W5A6NFC9 320 aa13.34□□□□□ -0.27
CPSF7-201ENST00000340437 SYT5O00445 386 aa13.34□□□□□ -0.27
CPSF7-201ENST00000340437 SOX30O94993 753 aa13.34□□□□□ -0.27
CPSF7-201ENST00000340437 SLC6A1P30531 599 aa13.34□□□□□ -0.27
CPSF7-201ENST00000340437 SNTB2Q13425 540 aaKnown RBP13.34□□□□□ -0.27
CPSF7-201ENST00000340437 MLC1Q15049 377 aa13.34□□□□□ -0.27
CPSF7-201ENST00000340437 RPE65Q16518 533 aa13.34□□□□□ -0.27
CPSF7-201ENST00000340437 OTPQ5XKR4 325 aa13.34□□□□□ -0.27
CPSF7-201ENST00000340437 TMEM64Q6YI46 380 aa13.34□□□□□ -0.27
CPSF7-201ENST00000340437 GID4Q8IVV7 300 aa13.34□□□□□ -0.27
CPSF7-201ENST00000340437 SLC38A6Q8IZM9 456 aa13.34□□□□□ -0.27
CPSF7-201ENST00000340437 C10orf53Q8N6V4 93 aa13.34□□□□□ -0.27
CPSF7-201ENST00000340437 GAL3ST1Q99999 423 aa13.34□□□□□ -0.27
CPSF7-201ENST00000340437 SOSTQ9BQB4 213 aa13.34□□□□□ -0.27
CPSF7-201ENST00000340437 ZNF649Q9BS31 505 aa13.34□□□□□ -0.27
CPSF7-201ENST00000340437 GTPBP2Q9BX10 602 aaKnown RBP13.34□□□□□ -0.27
CPSF7-201ENST00000340437 C11orf49Q9H6J7 331 aa13.34□□□□□ -0.27
CPSF7-201ENST00000340437 ISYNA1Q9NPH2 558 aa13.34□□□□□ -0.27
CPSF7-201ENST00000340437 MED31Q9Y3C7 131 aa13.34□□□□□ -0.27
CPSF7-201ENST00000340437 IDSB3KWA1 339 aa13.34□□□□□ -0.27
CPSF7-201ENST00000340437 FAM157BP0CG42 384 aa13.34□□□□□ -0.27
CPSF7-201ENST00000340437 CRYZQ08257 329 aaKnown RBP13.34□□□□□ -0.27
CPSF7-201ENST00000340437 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.34□□□□□ -0.27
CPSF7-201ENST00000340437 C9orf62Q8N4C0 152 aa13.34□□□□□ -0.27
CPSF7-201ENST00000340437 SRFBP1Q8NEF9 429 aaKnown RBP13.34□□□□□ -0.27
CPSF7-201ENST00000340437 SPPL3Q8TCT6 385 aa13.34□□□□□ -0.27
CPSF7-201ENST00000340437 SFXN5Q8TD22 340 aa13.34□□□□□ -0.27
CPSF7-201ENST00000340437 GIMAP1Q8WWP7 306 aa13.34□□□□□ -0.27
CPSF7-201ENST00000340437 FOLH1BQ9HBA9 442 aa13.34□□□□□ -0.27
CPSF7-201ENST00000340437 EXOGQ9Y2C4 368 aaKnown RBP13.34□□□□□ -0.27
CPSF7-201ENST00000340437 ACOD1A6NK06 481 aa13.34□□□□□ -0.27
CPSF7-201ENST00000340437 A8MUA0 341 aa13.34□□□□□ -0.27
CPSF7-201ENST00000340437 KAT7O95251 611 aa13.34□□□□□ -0.27
CPSF7-201ENST00000340437 FGF19O95750 216 aa13.34□□□□□ -0.27
CPSF7-201ENST00000340437 SLC35G6P0C7Q6 338 aa13.34□□□□□ -0.27
CPSF7-201ENST00000340437 DNASE1P24855 282 aa13.34□□□□□ -0.27
CPSF7-201ENST00000340437 EDNRAP25101 427 aa13.34□□□□□ -0.27
CPSF7-201ENST00000340437 PKLRP30613 574 aa13.34□□□□□ -0.27
CPSF7-201ENST00000340437 PRKAR1BP31321 381 aa13.34□□□□□ -0.27
CPSF7-201ENST00000340437 ACTR1BP42025 376 aa13.34□□□□□ -0.27
CPSF7-201ENST00000340437 MTNR1BP49286 362 aa13.34□□□□□ -0.27
CPSF7-201ENST00000340437 FXYD6P3P58550 94 aa13.34□□□□□ -0.27
CPSF7-201ENST00000340437 ACTR1AP61163 376 aa13.34□□□□□ -0.27
CPSF7-201ENST00000340437 FZD5Q13467 585 aa13.34□□□□□ -0.27
CPSF7-201ENST00000340437 ETFBKMTQ8IXQ9 262 aa13.34□□□□□ -0.27
CPSF7-201ENST00000340437 OR2L8Q8NGY9 312 aa13.34□□□□□ -0.27
CPSF7-201ENST00000340437 THAP4Q8WY91 577 aa13.34□□□□□ -0.27
CPSF7-201ENST00000340437 DERL3Q96Q80 235 aa13.34□□□□□ -0.27
CPSF7-201ENST00000340437 KCNJ15Q99712 375 aa13.34□□□□□ -0.27
CPSF7-201ENST00000340437 STON1Q9Y6Q2 735 aa13.34□□□□□ -0.27
CPSF7-201ENST00000340437 SGK494L7N484 410 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 GATBO75879 557 aaKnown RBP13.33□□□□□ -0.28
CPSF7-201ENST00000340437 IGHA1P01876 353 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 ANKRD34CP0C6C1 535 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 ERGP11308 486 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 ANXA3P12429 323 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 CPMP14384 443 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 RUNX2Q13950 521 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 NDUFAF6Q330K2 333 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 ZAR1Q86SH2 424 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 ZNF687Q8N1G0 1237 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 ZNF527Q8NB42 609 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 OR2T35Q8NGX2 323 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 OR8K3Q8NH51 312 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 LRRC20Q8TCA0 184 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 HSD17B8Q92506 261 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 ZNF681Q96N22 645 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 MS4A4EQ96PG1 132 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 C1QTNF6Q9BXI9 259 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 CLEC4MQ9H2X3 399 aaPredicted RBP13.33□□□□□ -0.28
CPSF7-201ENST00000340437 TBC1D29Q9UFV1 150 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 ZNF346Q9UL40 294 aaKnown RBP13.33□□□□□ -0.28
CPSF7-201ENST00000340437 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 H2AFB2P0C5Z0 115 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 ATF1P18846 271 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 TLX1P31314 330 aaPredicted RBP13.33□□□□□ -0.28
CPSF7-201ENST00000340437 SOX2P48431 317 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 SHC2P98077 582 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 TNK1Q13470 666 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 PDGFRLQ15198 375 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 DCST2Q5T1A1 773 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 KIAA1324Q6UXG2 1013 aaKnown RBP13.33□□□□□ -0.28
CPSF7-201ENST00000340437 CREB3L2Q70SY1 520 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 RNF44Q7L0R7 432 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 ASPGQ86U10 573 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 ACOT12Q8WYK0 555 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 CNOT9Q92600 299 aaKnown RBP13.33□□□□□ -0.28
CPSF7-201ENST00000340437 SMARCD2Q92925 531 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 GIMAP5Q96F15 307 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 KXD1Q9BQD3 176 aa13.33□□□□□ -0.28
CPSF7-201ENST00000340437 FGF22Q9HCT0 170 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms