RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 ZMIZ1Q9ULJ6 1067 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 MED31Q9Y3C7 131 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 ADAM18Q9Y3Q7 739 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 RPL36Q9Y3U8 105 aaKnown RBP6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 ADAMTS20P59510 1910 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 TNRC6BQ9UPQ9 1833 aaKnown RBP6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 IDSB3KWA1 339 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 B4DXG7 233 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 M0R3G1 203 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 MASP2O00187 686 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 CHP2O43745 196 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 PTP4A3O75365 173 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 GPX5O75715 221 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 CLPXO76031 633 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 NADKO95544 446 aaPredicted RBP6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 LALBAP00709 142 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 HPGDP15428 266 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 RORAP35398 523 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 MTNR1AP48039 350 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 GPR143P51810 404 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 TEKQ02763 1124 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 NCF4Q15080 339 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 ELAVL1Q15717 326 aaKnown RBP6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 NKAIN1Q4KMZ8 207 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 CCDC157Q569K6 752 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 FNDC7Q5VTL7 733 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 AADACL4Q5VUY2 407 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 NIPAL1Q6NVV3 410 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 ZNF613Q6PF04 617 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 LINC00114Q6XXX2 140 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 LSMEM1Q8N8F7 131 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 OR2T33Q8NG76 320 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 OR4D9Q8NGE8 314 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 OR51L1Q8NGJ5 315 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 DYNC2LI1Q8TCX1 351 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 ADAMTS18Q8TE60 1221 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 HSPBAP1Q96EW2 488 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 LCORQ96JN0 433 aaPredicted RBP6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 HS6ST2Q96MM7 605 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 SLC46A1Q96NT5 459 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 DEPDC7Q96QD5 511 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 NPAS1Q99742 590 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 ZNF426Q9BUY5 554 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 IFT27Q9BW83 186 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 POLE3Q9NRF9 147 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 PRODH2Q9UF12 536 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 MMACHCQ9Y4U1 282 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 CDH10Q9Y6N8 788 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 CUL9Q8IWT3 2517 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 BOD1L1Q8NFC6 3051 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 BLACEA4D250 179 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 PMS2P1A4D2B8 440 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 POLR1CO15160 346 aaPredicted RBP6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 PRODHO43272 600 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 MRPS14O60783 128 aaKnown RBP6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 PPP1R3DO95685 299 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 IFI6P09912 130 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 MSL3P1P0C860 447 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 ABCD3P28288 659 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 CLK1P49759 484 aaKnown RBP6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 LIMK1P53667 647 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 HCCSP53701 268 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 CDH11P55287 796 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 FOXK2Q01167 660 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 INSL4Q14641 139 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 SPHARQ15513 63 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 C1QL3Q5VWW1 255 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 TMPRSS11FQ6ZWK6 438 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 OAFQ86UD1 273 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 TMCO5AQ8N6Q1 288 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 SIRT6Q8N6T7 355 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 NANOGP1Q8N7R0 232 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 APCDD1LQ8NCL9 501 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 OR1N1Q8NGS0 311 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 ZNRF4Q8WWF5 429 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 C3orf49Q96BT1 292 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 ZHX1-C8orf76Q96EF9 292 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 TBX5Q99593 518 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 POLR2J2Q9GZM3 115 aaKnown RBP6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 SLIRPQ9GZT3 109 aaKnown RBP6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 WWTR1Q9GZV5 400 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 CCDC86Q9H6F5 360 aaKnown RBP6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 MCCC2Q9HCC0 563 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 TIMMDC1Q9NPL8 285 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 UBQLN4Q9NRR5 601 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 ERGIC3Q9Y282 383 aa6.78□□□□□ -1.32
SRFBP1-201ENST00000339397 SPENQ96T58 3664 aaKnown RBP6.77□□□□□ -1.32
SRFBP1-201ENST00000339397 hCG_2014768A0A024R1R8 64 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 IGKV1D-42A0A075B6H8 117 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 SMIM30A4D0T7 59 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 FMO6PO60774 539 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 IL33O95760 270 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 LIMS3P0CW19 117 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 LIMS4P0CW20 117 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 PIPP12273 146 aaPredicted RBP6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 CSTF2P33240 577 aaKnown RBP eCLIP6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 IDUAP35475 653 aa6.77□□□□□ -1.33
SRFBP1-201ENST00000339397 DAB2P98082 770 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms