RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 OR1J4Q8NGS1 313 aa13.23□□□□□ -0.29
NIPAL3-202ENST00000339255 OR52J3Q8NH60 311 aa13.23□□□□□ -0.29
NIPAL3-202ENST00000339255 GIPC3Q8TF64 312 aa13.23□□□□□ -0.29
NIPAL3-202ENST00000339255 NRG4Q8WWG1 115 aa13.23□□□□□ -0.29
NIPAL3-202ENST00000339255 ACOT11Q8WXI4 607 aaPredicted RBP13.23□□□□□ -0.29
NIPAL3-202ENST00000339255 DNAJC9Q8WXX5 260 aa13.23□□□□□ -0.29
NIPAL3-202ENST00000339255 HS6ST2Q96MM7 605 aa13.23□□□□□ -0.29
NIPAL3-202ENST00000339255 RBM4BQ9BQ04 359 aaKnown RBP13.23□□□□□ -0.29
NIPAL3-202ENST00000339255 FUZQ9BT04 418 aa13.23□□□□□ -0.29
NIPAL3-202ENST00000339255 RBM4Q9BWF3 364 aaKnown RBP13.23□□□□□ -0.29
NIPAL3-202ENST00000339255 KLHL4Q9C0H6 718 aa13.23□□□□□ -0.29
NIPAL3-202ENST00000339255 PROK2Q9HC23 129 aa13.23□□□□□ -0.29
NIPAL3-202ENST00000339255 KRCC1Q9NPI7 259 aaPredicted RBP13.23□□□□□ -0.29
NIPAL3-202ENST00000339255 TAS2R10Q9NYW0 307 aa13.23□□□□□ -0.29
NIPAL3-202ENST00000339255 NTNG1Q9Y2I2 539 aa13.23□□□□□ -0.29
NIPAL3-202ENST00000339255 PCDHGB7Q9Y5F8 929 aa13.23□□□□□ -0.29
NIPAL3-202ENST00000339255 TNRC6AQ8NDV7 1962 aaKnown RBP13.22□□□□□ -0.29
NIPAL3-202ENST00000339255 MED19A0JLT2 244 aaPredicted RBP13.22□□□□□ -0.29
NIPAL3-202ENST00000339255 SH3PXD2BA1X283 911 aa13.22□□□□□ -0.29
NIPAL3-202ENST00000339255 C2orf72A6NCS6 295 aa13.22□□□□□ -0.29
NIPAL3-202ENST00000339255 C1QTNF9BB2RNN3 333 aa13.22□□□□□ -0.29
NIPAL3-202ENST00000339255 MKRN2OSH3BPM6 223 aa13.22□□□□□ -0.29
NIPAL3-202ENST00000339255 ETV2O00321 342 aaPredicted RBP13.22□□□□□ -0.29
NIPAL3-202ENST00000339255 NME2P1O60361 137 aa13.22□□□□□ -0.29
NIPAL3-202ENST00000339255 CCNB2O95067 398 aa13.22□□□□□ -0.29
NIPAL3-202ENST00000339255 HPRP00739 348 aa13.22□□□□□ -0.29
NIPAL3-202ENST00000339255 ITGB2P05107 769 aa13.22□□□□□ -0.29
NIPAL3-202ENST00000339255 FREM3P0C091 2139 aa13.22□□□□□ -0.29
NIPAL3-202ENST00000339255 C1QTNF9P0C862 333 aa13.22□□□□□ -0.29
NIPAL3-202ENST00000339255 NME2P22392 152 aa13.22□□□□□ -0.29
NIPAL3-202ENST00000339255 IFNGR2P38484 337 aa13.22□□□□□ -0.29
NIPAL3-202ENST00000339255 TNFSF10P50591 281 aa13.22□□□□□ -0.29
NIPAL3-202ENST00000339255 DLX5P56178 289 aa13.22□□□□□ -0.29
NIPAL3-202ENST00000339255 LPCAT4Q643R3 524 aa13.22□□□□□ -0.29
NIPAL3-202ENST00000339255 OR5M10Q6IEU7 315 aa13.22□□□□□ -0.29
NIPAL3-202ENST00000339255 IGFL3Q6UXB1 125 aa13.22□□□□□ -0.29
NIPAL3-202ENST00000339255 RRM2BQ7LG56 351 aa13.22□□□□□ -0.29
NIPAL3-202ENST00000339255 GRINAQ7Z429 371 aa13.22□□□□□ -0.29
NIPAL3-202ENST00000339255 CBR4Q8N4T8 237 aa13.22□□□□□ -0.29
NIPAL3-202ENST00000339255 TMEM178AQ8NBL3 297 aa13.22□□□□□ -0.29
NIPAL3-202ENST00000339255 C3orf49Q96BT1 292 aa13.22□□□□□ -0.29
NIPAL3-202ENST00000339255 ZNF426Q9BUY5 554 aa13.22□□□□□ -0.29
NIPAL3-202ENST00000339255 ADAM19Q9H013 955 aa13.22□□□□□ -0.29
NIPAL3-202ENST00000339255 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.22□□□□□ -0.29
NIPAL3-202ENST00000339255 DSN1Q9H410 356 aa13.22□□□□□ -0.29
NIPAL3-202ENST00000339255 PLA2G3Q9NZ20 509 aa13.22□□□□□ -0.29
NIPAL3-202ENST00000339255 MED11Q9P086 117 aa13.22□□□□□ -0.29
NIPAL3-202ENST00000339255 PDP1Q9P0J1 537 aaPredicted RBP13.22□□□□□ -0.29
NIPAL3-202ENST00000339255 CFAP47Q6ZTR5 3102 aa13.22□□□□□ -0.29
NIPAL3-202ENST00000339255 LOC400499M0QZD8 3231 aa13.22□□□□□ -0.29
NIPAL3-202ENST00000339255 TRBV4-1A0A0J9YWV2 114 aa13.21□□□□□ -0.29
NIPAL3-202ENST00000339255 HTR3EA5X5Y0 456 aa13.21□□□□□ -0.29
NIPAL3-202ENST00000339255 ELOA3DA6NLF2 546 aaPredicted RBP13.21□□□□□ -0.29
NIPAL3-202ENST00000339255 C17orf51A8MQB3 221 aa13.21□□□□□ -0.29
NIPAL3-202ENST00000339255 H0YJX3 145 aa13.21□□□□□ -0.29
NIPAL3-202ENST00000339255 KLRC4-KLRK1H3BQV0 150 aa13.21□□□□□ -0.29
NIPAL3-202ENST00000339255 CBR3O75828 277 aa13.21□□□□□ -0.29
NIPAL3-202ENST00000339255 F10P00742 488 aa13.21□□□□□ -0.29
NIPAL3-202ENST00000339255 THY1P04216 161 aa13.21□□□□□ -0.29
NIPAL3-202ENST00000339255 SP1P08047 785 aa13.21□□□□□ -0.29
NIPAL3-202ENST00000339255 ANXA8P13928 327 aa13.21□□□□□ -0.29
NIPAL3-202ENST00000339255 EIF1P41567 113 aaKnown RBP13.21□□□□□ -0.29
NIPAL3-202ENST00000339255 MAP2K6P52564 334 aa13.21□□□□□ -0.29
NIPAL3-202ENST00000339255 ELOA3BQ3SY89 546 aa13.21□□□□□ -0.29
NIPAL3-202ENST00000339255 OTUD3Q5T2D3 398 aaPredicted RBP13.21□□□□□ -0.29
NIPAL3-202ENST00000339255 PPP4R4Q6NUP7 873 aa13.21□□□□□ -0.29
NIPAL3-202ENST00000339255 PODNL1Q6PEZ8 512 aa13.21□□□□□ -0.29
NIPAL3-202ENST00000339255 ZNF730Q6ZMV8 503 aa13.21□□□□□ -0.29
NIPAL3-202ENST00000339255 TMEM179BQ7Z7N9 219 aa13.21□□□□□ -0.29
NIPAL3-202ENST00000339255 RNF113BQ8IZP6 322 aaKnown RBP13.21□□□□□ -0.29
NIPAL3-202ENST00000339255 ELOA3Q8NG57 546 aa13.21□□□□□ -0.29
NIPAL3-202ENST00000339255 OR10G2Q8NGC3 310 aa13.21□□□□□ -0.29
NIPAL3-202ENST00000339255 OR4K5Q8NGD3 323 aa13.21□□□□□ -0.29
NIPAL3-202ENST00000339255 C1GALT1C1Q96EU7 318 aa13.21□□□□□ -0.29
NIPAL3-202ENST00000339255 MRGPRX4Q96LA9 322 aa13.21□□□□□ -0.29
NIPAL3-202ENST00000339255 SLC19A3Q9BZV2 496 aa13.21□□□□□ -0.29
NIPAL3-202ENST00000339255 USE1Q9NZ43 259 aa13.21□□□□□ -0.29
NIPAL3-202ENST00000339255 KIF17Q9P2E2 1029 aa13.21□□□□□ -0.29
NIPAL3-202ENST00000339255 B4GALT7Q9UBV7 327 aa13.21□□□□□ -0.29
NIPAL3-202ENST00000339255 A0A087WUJ7 227 aa13.21□□□□□ -0.3
NIPAL3-202ENST00000339255 C7orf72A4D263 438 aa13.21□□□□□ -0.3
NIPAL3-202ENST00000339255 EI24O14681 340 aa13.21□□□□□ -0.3
NIPAL3-202ENST00000339255 GNB5O14775 395 aa13.21□□□□□ -0.3
NIPAL3-202ENST00000339255 GMFGO60234 142 aa13.21□□□□□ -0.3
NIPAL3-202ENST00000339255 LYPD3O95274 346 aa13.21□□□□□ -0.3
NIPAL3-202ENST00000339255 ALPLP05186 524 aa13.21□□□□□ -0.3
NIPAL3-202ENST00000339255 PRKCAP17252 672 aa13.21□□□□□ -0.3
NIPAL3-202ENST00000339255 MST1P26927 711 aa13.21□□□□□ -0.3
NIPAL3-202ENST00000339255 DNASE1L1P49184 302 aa13.21□□□□□ -0.3
NIPAL3-202ENST00000339255 ALDH3A2P51648 485 aa13.21□□□□□ -0.3
NIPAL3-202ENST00000339255 POLR2HP52434 150 aaKnown RBP13.21□□□□□ -0.3
NIPAL3-202ENST00000339255 DSCR4P56555 118 aaPredicted RBP13.21□□□□□ -0.3
NIPAL3-202ENST00000339255 PPP2R2BQ00005 443 aa13.21□□□□□ -0.3
NIPAL3-202ENST00000339255 PPP1R8Q12972 351 aaKnown RBP13.21□□□□□ -0.3
NIPAL3-202ENST00000339255 SLC25A53Q5H9E4 307 aa13.21□□□□□ -0.3
NIPAL3-202ENST00000339255 SLC25A25Q6KCM7 469 aa13.21□□□□□ -0.3
NIPAL3-202ENST00000339255 FAHD1Q6P587 224 aa13.21□□□□□ -0.3
NIPAL3-202ENST00000339255 ATG4DQ86TL0 474 aaPredicted RBP13.21□□□□□ -0.3
NIPAL3-202ENST00000339255 ZADH2Q8N4Q0 377 aa13.21□□□□□ -0.3
NIPAL3-202ENST00000339255 OR2M7Q8NG81 312 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms