RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 Q96MF0 132 aa11.88□□□□□ -0.51
NUDCD3-201ENST00000338427 OR5B2Q96R09 309 aa11.88□□□□□ -0.51
NUDCD3-201ENST00000338427 ZNF300Q96RE9 604 aaPredicted RBP11.88□□□□□ -0.51
NUDCD3-201ENST00000338427 CCL19Q99731 98 aa11.88□□□□□ -0.51
NUDCD3-201ENST00000338427 GLRX2Q9NS18 164 aa11.88□□□□□ -0.51
NUDCD3-201ENST00000338427 PCDHGB4Q9UN71 923 aa11.88□□□□□ -0.51
NUDCD3-201ENST00000338427 GPR52Q9Y2T5 361 aa11.88□□□□□ -0.51
NUDCD3-201ENST00000338427 USF3Q68DE3 2245 aa11.88□□□□□ -0.51
NUDCD3-201ENST00000338427 H7C1Q1 480 aa11.87□□□□□ -0.51
NUDCD3-201ENST00000338427 SDHDO14521 159 aa11.87□□□□□ -0.51
NUDCD3-201ENST00000338427 YES1P07947 543 aa11.87□□□□□ -0.51
NUDCD3-201ENST00000338427 KITP10721 976 aa11.87□□□□□ -0.51
NUDCD3-201ENST00000338427 ADSLP30566 484 aaPredicted RBP11.87□□□□□ -0.51
NUDCD3-201ENST00000338427 PGM1P36871 562 aa11.87□□□□□ -0.51
NUDCD3-201ENST00000338427 CDKN2CP42773 168 aa11.87□□□□□ -0.51
NUDCD3-201ENST00000338427 PLAURQ03405 335 aa11.87□□□□□ -0.51
NUDCD3-201ENST00000338427 MERTKQ12866 999 aa11.87□□□□□ -0.51
NUDCD3-201ENST00000338427 CBFBQ13951 182 aa11.87□□□□□ -0.51
NUDCD3-201ENST00000338427 SYPL1Q16563 259 aa11.87□□□□□ -0.51
NUDCD3-201ENST00000338427 SMU1Q2TAY7 513 aa11.87□□□□□ -0.51
NUDCD3-201ENST00000338427 FAM174BQ3ZCQ3 159 aa11.87□□□□□ -0.51
NUDCD3-201ENST00000338427 BEX5Q5H9J7 111 aa11.87□□□□□ -0.51
NUDCD3-201ENST00000338427 SFRP5Q5T4F7 317 aa11.87□□□□□ -0.51
NUDCD3-201ENST00000338427 SHEQ5VZ18 495 aa11.87□□□□□ -0.51
NUDCD3-201ENST00000338427 SAXO2Q658L1 398 aa11.87□□□□□ -0.51
NUDCD3-201ENST00000338427 FRRS1Q6ZNA5 592 aa11.87□□□□□ -0.51
NUDCD3-201ENST00000338427 ZNF704Q6ZNC4 412 aaPredicted RBP11.87□□□□□ -0.51
NUDCD3-201ENST00000338427 C16orf62Q7Z3J2 963 aa11.87□□□□□ -0.51
NUDCD3-201ENST00000338427 YTHDF3Q7Z739 585 aaKnown RBP11.87□□□□□ -0.51
NUDCD3-201ENST00000338427 GABRG1Q8N1C3 465 aa11.87□□□□□ -0.51
NUDCD3-201ENST00000338427 ANKFN1Q8N957 763 aa11.87□□□□□ -0.51
NUDCD3-201ENST00000338427 TOR1AIP2Q8NFQ8 470 aa11.87□□□□□ -0.51
NUDCD3-201ENST00000338427 MGARPQ8TDB4 240 aa11.87□□□□□ -0.51
NUDCD3-201ENST00000338427 CNOT9Q92600 299 aaKnown RBP11.87□□□□□ -0.51
NUDCD3-201ENST00000338427 PIGTQ969N2 578 aa11.87□□□□□ -0.51
NUDCD3-201ENST00000338427 CPNE4Q96A23 557 aaPredicted RBP11.87□□□□□ -0.51
NUDCD3-201ENST00000338427 ROPN1LQ96C74 230 aa11.87□□□□□ -0.51
NUDCD3-201ENST00000338427 MRGPRX4Q96LA9 322 aa11.87□□□□□ -0.51
NUDCD3-201ENST00000338427 NMUR2Q9GZQ4 415 aa11.87□□□□□ -0.51
NUDCD3-201ENST00000338427 ZNF350Q9GZX5 532 aa11.87□□□□□ -0.51
NUDCD3-201ENST00000338427 HHATLQ9HCP6 504 aa11.87□□□□□ -0.51
NUDCD3-201ENST00000338427 SSU72Q9NP77 194 aaKnown RBP11.87□□□□□ -0.51
NUDCD3-201ENST00000338427 TIGARQ9NQ88 270 aa11.87□□□□□ -0.51
NUDCD3-201ENST00000338427 CTPS2Q9NRF8 586 aa11.87□□□□□ -0.51
NUDCD3-201ENST00000338427 RAB21Q9UL25 225 aa11.87□□□□□ -0.51
NUDCD3-201ENST00000338427 DUXAA6NLW8 204 aa11.86□□□□□ -0.51
NUDCD3-201ENST00000338427 SMAD9O15198 467 aaKnown RBP11.86□□□□□ -0.51
NUDCD3-201ENST00000338427 TM9SF1O15321 606 aa11.86□□□□□ -0.51
NUDCD3-201ENST00000338427 ARHGEF9O43307 516 aa11.86□□□□□ -0.51
NUDCD3-201ENST00000338427 DNAJA2O60884 412 aa11.86□□□□□ -0.51
NUDCD3-201ENST00000338427 SOX30O94993 753 aa11.86□□□□□ -0.51
NUDCD3-201ENST00000338427 PSMB1P20618 241 aaKnown RBP11.86□□□□□ -0.51
NUDCD3-201ENST00000338427 FPR1P21462 350 aa11.86□□□□□ -0.51
NUDCD3-201ENST00000338427 ELK4P28324 431 aa11.86□□□□□ -0.51
NUDCD3-201ENST00000338427 SLC7A1P30825 629 aa11.86□□□□□ -0.51
NUDCD3-201ENST00000338427 S100A3P33764 101 aa11.86□□□□□ -0.51
NUDCD3-201ENST00000338427 NTF4P34130 210 aa11.86□□□□□ -0.51
NUDCD3-201ENST00000338427 NR1H2P55055 460 aa11.86□□□□□ -0.51
NUDCD3-201ENST00000338427 SUMO3P55854 103 aaPredicted RBP11.86□□□□□ -0.51
NUDCD3-201ENST00000338427 RAC3P60763 192 aa11.86□□□□□ -0.51
NUDCD3-201ENST00000338427 RASGEF1BQ0VAM2 473 aa11.86□□□□□ -0.51
NUDCD3-201ENST00000338427 TAB1Q15750 504 aa11.86□□□□□ -0.51
NUDCD3-201ENST00000338427 COX20Q5RI15 118 aa11.86□□□□□ -0.51
NUDCD3-201ENST00000338427 HHATQ5VTY9 493 aa11.86□□□□□ -0.51
NUDCD3-201ENST00000338427 BHLHB9Q6PI77 547 aa11.86□□□□□ -0.51
NUDCD3-201ENST00000338427 CLEC9AQ6UXN8 241 aa11.86□□□□□ -0.51
NUDCD3-201ENST00000338427 PLEKHM3Q6ZWE6 761 aa11.86□□□□□ -0.51
NUDCD3-201ENST00000338427 STK32CQ86UX6 486 aa11.86□□□□□ -0.51
NUDCD3-201ENST00000338427 RNF130Q86XS8 419 aa11.86□□□□□ -0.51
NUDCD3-201ENST00000338427 MIPOL1Q8TD10 442 aa11.86□□□□□ -0.51
NUDCD3-201ENST00000338427 IGFBPL1Q8WX77 278 aa11.86□□□□□ -0.51
NUDCD3-201ENST00000338427 AKAP1Q92667 903 aaKnown RBP eCLIP11.86□□□□□ -0.51
NUDCD3-201ENST00000338427 PIP5K1AQ99755 562 aa11.86□□□□□ -0.51
NUDCD3-201ENST00000338427 PSD2Q9BQI7 771 aa11.86□□□□□ -0.51
NUDCD3-201ENST00000338427 SLC35A5Q9BS91 424 aa11.86□□□□□ -0.51
NUDCD3-201ENST00000338427 MEAF6Q9HAF1 191 aa11.86□□□□□ -0.51
NUDCD3-201ENST00000338427 ACER3Q9NUN7 267 aa11.86□□□□□ -0.51
NUDCD3-201ENST00000338427 EXD2Q9NVH0 621 aa11.86□□□□□ -0.51
NUDCD3-201ENST00000338427 KLHL13Q9P2N7 655 aa11.86□□□□□ -0.51
NUDCD3-201ENST00000338427 MARCOQ9UEW3 520 aaPredicted RBP11.86□□□□□ -0.51
NUDCD3-201ENST00000338427 HAO1Q9UJM8 370 aa11.86□□□□□ -0.51
NUDCD3-201ENST00000338427 WDR45Q9Y484 360 aa11.86□□□□□ -0.51
NUDCD3-201ENST00000338427 RAI1Q7Z5J4 1906 aaPredicted RBP11.86□□□□□ -0.51
NUDCD3-201ENST00000338427 DPRXA6NFQ7 191 aa11.85□□□□□ -0.51
NUDCD3-201ENST00000338427 CCDC154A6NI56 674 aa11.85□□□□□ -0.51
NUDCD3-201ENST00000338427 GJE1A6NN92 205 aa11.85□□□□□ -0.51
NUDCD3-201ENST00000338427 ETV2O00321 342 aaPredicted RBP11.85□□□□□ -0.51
NUDCD3-201ENST00000338427 HMGN4O00479 90 aa11.85□□□□□ -0.51
NUDCD3-201ENST00000338427 AP3D1O14617 1153 aa11.85□□□□□ -0.51
NUDCD3-201ENST00000338427 RAMP1O60894 148 aa11.85□□□□□ -0.51
NUDCD3-201ENST00000338427 LYZL6O75951 148 aa11.85□□□□□ -0.51
NUDCD3-201ENST00000338427 IGHV3-9P01782 118 aa11.85□□□□□ -0.51
NUDCD3-201ENST00000338427 PABPC4LP0CB38 370 aaKnown RBP11.85□□□□□ -0.51
NUDCD3-201ENST00000338427 TFPIP10646 304 aa11.85□□□□□ -0.51
NUDCD3-201ENST00000338427 PPP3CBP16298 524 aa11.85□□□□□ -0.51
NUDCD3-201ENST00000338427 PTNP21246 168 aa11.85□□□□□ -0.51
NUDCD3-201ENST00000338427 EPHA3P29320 983 aa11.85□□□□□ -0.51
NUDCD3-201ENST00000338427 CHI3L1P36222 383 aaPredicted RBP11.85□□□□□ -0.51
NUDCD3-201ENST00000338427 PTH2RP49190 550 aa11.85□□□□□ -0.51
NUDCD3-201ENST00000338427 DIO1P49895 249 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms