RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 CT45A8P0DMV1 189 aa13.69□□□□□ -0.22
CLCNKA-201ENST00000331433 CT45A9P0DMV2 189 aa13.69□□□□□ -0.22
CLCNKA-201ENST00000331433 GPR3P46089 330 aa13.69□□□□□ -0.22
CLCNKA-201ENST00000331433 FASLGP48023 281 aa13.69□□□□□ -0.22
CLCNKA-201ENST00000331433 COPZ1P61923 177 aa13.69□□□□□ -0.22
CLCNKA-201ENST00000331433 CT45A2Q5DJT8 189 aa13.69□□□□□ -0.22
CLCNKA-201ENST00000331433 GRAMD2AQ8IUY3 354 aa13.69□□□□□ -0.22
CLCNKA-201ENST00000331433 ZNF595Q8IYB9 648 aa13.69□□□□□ -0.22
CLCNKA-201ENST00000331433 TMCO6Q96DC7 493 aa13.69□□□□□ -0.22
CLCNKA-201ENST00000331433 NEDD4LQ96PU5 975 aa13.69□□□□□ -0.22
CLCNKA-201ENST00000331433 TEAD3Q99594 435 aa13.69□□□□□ -0.22
CLCNKA-201ENST00000331433 ZNF426Q9BUY5 554 aa13.69□□□□□ -0.22
CLCNKA-201ENST00000331433 MCCC2Q9HCC0 563 aa13.69□□□□□ -0.22
CLCNKA-201ENST00000331433 SPAG17Q6Q759 2223 aa13.69□□□□□ -0.22
CLCNKA-201ENST00000331433 IGHV5-51A0A0C4DH38 117 aa13.69□□□□□ -0.22
CLCNKA-201ENST00000331433 DAPL1A0PJW8 107 aa13.69□□□□□ -0.22
CLCNKA-201ENST00000331433 CCDC182A6NF36 153 aa13.69□□□□□ -0.22
CLCNKA-201ENST00000331433 RIIAD1A6NNX1 92 aa13.69□□□□□ -0.22
CLCNKA-201ENST00000331433 CLDN4O14493 209 aa13.69□□□□□ -0.22
CLCNKA-201ENST00000331433 NSA2O95478 260 aaKnown RBP13.69□□□□□ -0.22
CLCNKA-201ENST00000331433 IFNA16P05015 189 aa13.69□□□□□ -0.22
CLCNKA-201ENST00000331433 NME1P15531 152 aaKnown RBP13.69□□□□□ -0.22
CLCNKA-201ENST00000331433 MLLT3P42568 568 aaPredicted RBP13.69□□□□□ -0.22
CLCNKA-201ENST00000331433 IGLV3-21P80748 117 aaPredicted RBP13.69□□□□□ -0.22
CLCNKA-201ENST00000331433 FHL1Q13642 323 aa13.69□□□□□ -0.22
CLCNKA-201ENST00000331433 ARMC4Q5T2S8 1044 aa13.69□□□□□ -0.22
CLCNKA-201ENST00000331433 TMEM91Q6ZNR0 172 aa13.69□□□□□ -0.22
CLCNKA-201ENST00000331433 OR4C3Q8NH37 302 aa13.69□□□□□ -0.22
CLCNKA-201ENST00000331433 OR4C6Q8NH72 309 aa13.69□□□□□ -0.22
CLCNKA-201ENST00000331433 DNAJA4Q8WW22 397 aaPredicted RBP13.69□□□□□ -0.22
CLCNKA-201ENST00000331433 TXNDC15Q96J42 360 aa13.69□□□□□ -0.22
CLCNKA-201ENST00000331433 TRIM2Q9C040 744 aa13.69□□□□□ -0.22
CLCNKA-201ENST00000331433 Q9N2J8 555 aa13.69□□□□□ -0.22
CLCNKA-201ENST00000331433 SLC35A3Q9Y2D2 325 aa13.69□□□□□ -0.22
CLCNKA-201ENST00000331433 OR10H1Q9Y4A9 318 aa13.69□□□□□ -0.22
CLCNKA-201ENST00000331433 ASXL3Q9C0F0 2248 aa13.69□□□□□ -0.22
CLCNKA-201ENST00000331433 LRRN3E7EW58 273 aa13.68□□□□□ -0.22
CLCNKA-201ENST00000331433 PRAMEF2O60811 474 aa13.68□□□□□ -0.22
CLCNKA-201ENST00000331433 CD38P28907 300 aa13.68□□□□□ -0.22
CLCNKA-201ENST00000331433 SKP1P63208 163 aa13.68□□□□□ -0.22
CLCNKA-201ENST00000331433 FGFBP1Q14512 234 aa13.68□□□□□ -0.22
CLCNKA-201ENST00000331433 DEFB133Q30KQ1 61 aa13.68□□□□□ -0.22
CLCNKA-201ENST00000331433 NKAIN2Q5VXU1 208 aa13.68□□□□□ -0.22
CLCNKA-201ENST00000331433 AP3S1Q92572 193 aa13.68□□□□□ -0.22
CLCNKA-201ENST00000331433 LMF1Q96S06 567 aa13.68□□□□□ -0.22
CLCNKA-201ENST00000331433 SPRTNQ9H040 489 aaPredicted RBP13.68□□□□□ -0.22
CLCNKA-201ENST00000331433 OR10A5Q9H207 317 aa13.68□□□□□ -0.22
CLCNKA-201ENST00000331433 LRRN3Q9H3W5 708 aa13.68□□□□□ -0.22
CLCNKA-201ENST00000331433 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.68□□□□□ -0.22
CLCNKA-201ENST00000331433 BABAM2Q9NXR7 383 aa13.68□□□□□ -0.22
CLCNKA-201ENST00000331433 MAU2Q9Y6X3 613 aa13.68□□□□□ -0.22
CLCNKA-201ENST00000331433 SLC22A31A6NKX4 558 aa13.68□□□□□ -0.22
CLCNKA-201ENST00000331433 CHURC1-FNTBB4DL54 471 aa13.68□□□□□ -0.22
CLCNKA-201ENST00000331433 NPIPB9F8W1W9 429 aa13.68□□□□□ -0.22
CLCNKA-201ENST00000331433 RNF13O43567 381 aa13.68□□□□□ -0.22
CLCNKA-201ENST00000331433 SDC3O75056 442 aa13.68□□□□□ -0.22
CLCNKA-201ENST00000331433 TMCC2O75069 709 aa13.68□□□□□ -0.22
CLCNKA-201ENST00000331433 SRFP11831 508 aa13.68□□□□□ -0.22
CLCNKA-201ENST00000331433 NUDT1P36639 197 aa13.68□□□□□ -0.22
CLCNKA-201ENST00000331433 GABRA4P48169 554 aa13.68□□□□□ -0.22
CLCNKA-201ENST00000331433 RFX2P48378 723 aa13.68□□□□□ -0.22
CLCNKA-201ENST00000331433 FNTBP49356 437 aa13.68□□□□□ -0.22
CLCNKA-201ENST00000331433 DAB2P98082 770 aa13.68□□□□□ -0.22
CLCNKA-201ENST00000331433 ZNF141Q15928 474 aa13.68□□□□□ -0.22
CLCNKA-201ENST00000331433 AKAP14Q86UN6 197 aa13.68□□□□□ -0.22
CLCNKA-201ENST00000331433 BCORP1Q8N888 145 aa13.68□□□□□ -0.22
CLCNKA-201ENST00000331433 LSMEM1Q8N8F7 131 aa13.68□□□□□ -0.22
CLCNKA-201ENST00000331433 FAM181AQ8N9Y4 354 aa13.68□□□□□ -0.22
CLCNKA-201ENST00000331433 IL17RDQ8NFM7 739 aa13.68□□□□□ -0.22
CLCNKA-201ENST00000331433 OR51Q1Q8NH59 317 aa13.68□□□□□ -0.22
CLCNKA-201ENST00000331433 MSANTD3Q96H12 275 aa13.68□□□□□ -0.22
CLCNKA-201ENST00000331433 A0A1W2PR77 199 aa13.67□□□□□ -0.22
CLCNKA-201ENST00000331433 E9PI62 339 aa13.67□□□□□ -0.22
CLCNKA-201ENST00000331433 GTPBP1O00178 669 aaKnown RBP13.67□□□□□ -0.22
CLCNKA-201ENST00000331433 AGRPO00253 132 aa13.67□□□□□ -0.22
CLCNKA-201ENST00000331433 MBTPS2O43462 519 aa13.67□□□□□ -0.22
CLCNKA-201ENST00000331433 ZNF217O75362 1048 aa13.67□□□□□ -0.22
CLCNKA-201ENST00000331433 ZNF3P17036 446 aa13.67□□□□□ -0.22
CLCNKA-201ENST00000331433 GALEQ14376 348 aa13.67□□□□□ -0.22
CLCNKA-201ENST00000331433 KCNAB1Q14722 419 aa13.67□□□□□ -0.22
CLCNKA-201ENST00000331433 RTL4Q6ZR62 310 aa13.67□□□□□ -0.22
CLCNKA-201ENST00000331433 GKN2Q86XP6 184 aa13.67□□□□□ -0.22
CLCNKA-201ENST00000331433 LRRC17Q8N6Y2 441 aa13.67□□□□□ -0.22
CLCNKA-201ENST00000331433 OR6C4Q8NGE1 309 aa13.67□□□□□ -0.22
CLCNKA-201ENST00000331433 ASB6Q9NWX5 421 aa13.67□□□□□ -0.22
CLCNKA-201ENST00000331433 MALT1Q9UDY8 824 aa13.67□□□□□ -0.22
CLCNKA-201ENST00000331433 MPDZO75970 2070 aa13.67□□□□□ -0.22
CLCNKA-201ENST00000331433 HPGDSO60760 199 aa13.67□□□□□ -0.22
CLCNKA-201ENST00000331433 ATP6V1G1O75348 118 aa13.67□□□□□ -0.22
CLCNKA-201ENST00000331433 SOX30O94993 753 aa13.67□□□□□ -0.22
CLCNKA-201ENST00000331433 CSTAP01040 98 aa13.67□□□□□ -0.22
CLCNKA-201ENST00000331433 CSF3P09919 207 aa13.67□□□□□ -0.22
CLCNKA-201ENST00000331433 PEPDP12955 493 aa13.67□□□□□ -0.22
CLCNKA-201ENST00000331433 SLC2A5P22732 501 aa13.67□□□□□ -0.22
CLCNKA-201ENST00000331433 CD27P26842 260 aa13.67□□□□□ -0.22
CLCNKA-201ENST00000331433 RBM34P42696 430 aaKnown RBP13.67□□□□□ -0.22
CLCNKA-201ENST00000331433 ATP12AP54707 1039 aa13.67□□□□□ -0.22
CLCNKA-201ENST00000331433 PYDC2Q56P42 97 aa13.67□□□□□ -0.22
CLCNKA-201ENST00000331433 ULK3Q6PHR2 472 aa13.67□□□□□ -0.22
CLCNKA-201ENST00000331433 XKRXQ6PP77 449 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms