RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 FEVQ99581 238 aa13.89□□□□□ -0.19
PRPF3-201ENST00000324862 NIPSNAP1Q9BPW8 284 aa13.89□□□□□ -0.19
PRPF3-201ENST00000324862 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.89□□□□□ -0.19
PRPF3-201ENST00000324862 TUBA8Q9NY65 449 aaPredicted RBP13.89□□□□□ -0.19
PRPF3-201ENST00000324862 C7orf72A4D263 438 aa13.88□□□□□ -0.19
PRPF3-201ENST00000324862 FMO6PO60774 539 aa13.88□□□□□ -0.19
PRPF3-201ENST00000324862 GASTP01350 101 aa13.88□□□□□ -0.19
PRPF3-201ENST00000324862 IL11P20809 199 aa13.88□□□□□ -0.19
PRPF3-201ENST00000324862 TACR3P29371 465 aa13.88□□□□□ -0.19
PRPF3-201ENST00000324862 CASRP41180 1078 aa13.88□□□□□ -0.19
PRPF3-201ENST00000324862 DAPP51397 102 aa13.88□□□□□ -0.19
PRPF3-201ENST00000324862 UGT2B15P54855 530 aa13.88□□□□□ -0.19
PRPF3-201ENST00000324862 CBFBQ13951 182 aa13.88□□□□□ -0.19
PRPF3-201ENST00000324862 DCST1Q5T197 706 aa13.88□□□□□ -0.19
PRPF3-201ENST00000324862 SLC30A6Q6NXT4 461 aa13.88□□□□□ -0.19
PRPF3-201ENST00000324862 IZUMO2Q6UXV1 221 aa13.88□□□□□ -0.19
PRPF3-201ENST00000324862 GALNT5Q7Z7M9 940 aa13.88□□□□□ -0.19
PRPF3-201ENST00000324862 SULF2Q8IWU5 870 aa13.88□□□□□ -0.19
PRPF3-201ENST00000324862 TOR1AIP2Q8NFQ8 470 aa13.88□□□□□ -0.19
PRPF3-201ENST00000324862 OR10G2Q8NGC3 310 aa13.88□□□□□ -0.19
PRPF3-201ENST00000324862 OIT3Q8WWZ8 545 aa13.88□□□□□ -0.19
PRPF3-201ENST00000324862 GTPBP3Q969Y2 492 aaKnown RBP13.88□□□□□ -0.19
PRPF3-201ENST00000324862 NTNG2Q96CW9 530 aa13.88□□□□□ -0.19
PRPF3-201ENST00000324862 FRMD6Q96NE9 622 aa13.88□□□□□ -0.19
PRPF3-201ENST00000324862 SECISBP2Q96T21 854 aaKnown RBP13.88□□□□□ -0.19
PRPF3-201ENST00000324862 TRIM2Q9C040 744 aa13.88□□□□□ -0.19
PRPF3-201ENST00000324862 KLHL4Q9C0H6 718 aa13.88□□□□□ -0.19
PRPF3-201ENST00000324862 C20orf141Q9NUB4 165 aa13.88□□□□□ -0.19
PRPF3-201ENST00000324862 CNIH4Q9P003 139 aa13.88□□□□□ -0.19
PRPF3-201ENST00000324862 RPH3AQ9Y2J0 694 aaPredicted RBP13.88□□□□□ -0.19
PRPF3-201ENST00000324862 SH3PXD2BA1X283 911 aa13.88□□□□□ -0.19
PRPF3-201ENST00000324862 OR10H3O60404 316 aa13.88□□□□□ -0.19
PRPF3-201ENST00000324862 CEACAM4O75871 244 aa13.88□□□□□ -0.19
PRPF3-201ENST00000324862 HOXB6P17509 224 aaKnown RBP13.88□□□□□ -0.19
PRPF3-201ENST00000324862 FUT1P19526 365 aa13.88□□□□□ -0.19
PRPF3-201ENST00000324862 CXADRP78310 365 aa13.88□□□□□ -0.19
PRPF3-201ENST00000324862 IL1RL1Q01638 556 aa13.88□□□□□ -0.19
PRPF3-201ENST00000324862 SNTA1Q13424 505 aa13.88□□□□□ -0.19
PRPF3-201ENST00000324862 MICAQ29983 383 aa13.88□□□□□ -0.19
PRPF3-201ENST00000324862 ZNF770Q6IQ21 691 aaPredicted RBP13.88□□□□□ -0.19
PRPF3-201ENST00000324862 PLCZ1Q86YW0 608 aa13.88□□□□□ -0.19
PRPF3-201ENST00000324862 DND1Q8IYX4 353 aaKnown RBP13.88□□□□□ -0.19
PRPF3-201ENST00000324862 MDS2Q8NDY4 140 aa13.88□□□□□ -0.19
PRPF3-201ENST00000324862 OR4K5Q8NGD3 323 aa13.88□□□□□ -0.19
PRPF3-201ENST00000324862 MED17Q9NVC6 651 aa13.88□□□□□ -0.19
PRPF3-201ENST00000324862 RPS6KB2Q9UBS0 482 aa13.88□□□□□ -0.19
PRPF3-201ENST00000324862 LRRC3CA6NJW4 275 aa13.87□□□□□ -0.19
PRPF3-201ENST00000324862 LRRN3E7EW58 273 aa13.87□□□□□ -0.19
PRPF3-201ENST00000324862 DLGAP1O14490 977 aa13.87□□□□□ -0.19
PRPF3-201ENST00000324862 DPM1O60762 260 aa13.87□□□□□ -0.19
PRPF3-201ENST00000324862 TRIM3O75382 744 aaPredicted RBP13.87□□□□□ -0.19
PRPF3-201ENST00000324862 OPN1LWP04000 364 aa13.87□□□□□ -0.19
PRPF3-201ENST00000324862 POLR2IP36954 125 aaKnown RBP13.87□□□□□ -0.19
PRPF3-201ENST00000324862 VHLP40337 213 aa13.87□□□□□ -0.19
PRPF3-201ENST00000324862 PPP2R2BQ00005 443 aa13.87□□□□□ -0.19
PRPF3-201ENST00000324862 TRAM2Q15035 370 aa13.87□□□□□ -0.19
PRPF3-201ENST00000324862 ZIK1Q3SY52 487 aaPredicted RBP13.87□□□□□ -0.19
PRPF3-201ENST00000324862 WBP2NLQ6ICG8 309 aa13.87□□□□□ -0.19
PRPF3-201ENST00000324862 ZNF613Q6PF04 617 aa13.87□□□□□ -0.19
PRPF3-201ENST00000324862 LRRC69Q6ZNQ3 347 aa13.87□□□□□ -0.19
PRPF3-201ENST00000324862 PRICKLE2Q7Z3G6 844 aa13.87□□□□□ -0.19
PRPF3-201ENST00000324862 MISPQ8IVT2 679 aa13.87□□□□□ -0.19
PRPF3-201ENST00000324862 NRMQ8IXM6 262 aa13.87□□□□□ -0.19
PRPF3-201ENST00000324862 ZNF440Q8IYI8 595 aa13.87□□□□□ -0.19
PRPF3-201ENST00000324862 AQP11Q8NBQ7 271 aa13.87□□□□□ -0.19
PRPF3-201ENST00000324862 OR4K17Q8NGC6 315 aa13.87□□□□□ -0.19
PRPF3-201ENST00000324862 GIPC3Q8TF64 312 aa13.87□□□□□ -0.19
PRPF3-201ENST00000324862 ZCCHC14Q8WYQ9 949 aaKnown RBP13.87□□□□□ -0.19
PRPF3-201ENST00000324862 UBL7Q96S82 380 aaPredicted RBP13.87□□□□□ -0.19
PRPF3-201ENST00000324862 MEPEQ9NQ76 525 aaPredicted RBP13.87□□□□□ -0.19
PRPF3-201ENST00000324862 TAS2R10Q9NYW0 307 aa13.87□□□□□ -0.19
PRPF3-201ENST00000324862 OSGIN1Q9UJX0 560 aa13.87□□□□□ -0.19
PRPF3-201ENST00000324862 TNRC6AQ8NDV7 1962 aaKnown RBP13.87□□□□□ -0.19
PRPF3-201ENST00000324862 SMG1Q96Q15 3661 aaKnown RBP13.87□□□□□ -0.19
PRPF3-201ENST00000324862 ANKUB1A6NFN9 424 aa13.86□□□□□ -0.19
PRPF3-201ENST00000324862 SNPHO15079 494 aa13.86□□□□□ -0.19
PRPF3-201ENST00000324862 CCNB2O95067 398 aa13.86□□□□□ -0.19
PRPF3-201ENST00000324862 RASAL1O95294 804 aa13.86□□□□□ -0.19
PRPF3-201ENST00000324862 PRKCAP17252 672 aa13.86□□□□□ -0.19
PRPF3-201ENST00000324862 PGCP20142 388 aa13.86□□□□□ -0.19
PRPF3-201ENST00000324862 SLC1A3P43003 542 aa13.86□□□□□ -0.19
PRPF3-201ENST00000324862 FOXO1Q12778 655 aa13.86□□□□□ -0.19
PRPF3-201ENST00000324862 FOXF1Q12946 379 aa13.86□□□□□ -0.19
PRPF3-201ENST00000324862 ZSWIM7Q19AV6 140 aa13.86□□□□□ -0.19
PRPF3-201ENST00000324862 TIGD3Q6B0B8 471 aa13.86□□□□□ -0.19
PRPF3-201ENST00000324862 TMEM81Q6P7N7 255 aa13.86□□□□□ -0.19
PRPF3-201ENST00000324862 ULK3Q6PHR2 472 aa13.86□□□□□ -0.19
PRPF3-201ENST00000324862 ZNF730Q6ZMV8 503 aa13.86□□□□□ -0.19
PRPF3-201ENST00000324862 ZER1Q7Z7L7 766 aa13.86□□□□□ -0.19
PRPF3-201ENST00000324862 FADS6Q8N9I5 356 aa13.86□□□□□ -0.19
PRPF3-201ENST00000324862 OR1J4Q8NGS1 313 aa13.86□□□□□ -0.19
PRPF3-201ENST00000324862 HAS2Q92819 552 aa13.86□□□□□ -0.19
PRPF3-201ENST00000324862 SLC35B4Q969S0 331 aa13.86□□□□□ -0.19
PRPF3-201ENST00000324862 C9orf16Q9BUW7 83 aa13.86□□□□□ -0.19
PRPF3-201ENST00000324862 TIMMDC1Q9NPL8 285 aa13.86□□□□□ -0.19
PRPF3-201ENST00000324862 TMEFF2Q9UIK5 374 aaPredicted RBP13.86□□□□□ -0.19
PRPF3-201ENST00000324862 ZC3H12DA2A288 527 aaKnown RBP13.86□□□□□ -0.19
PRPF3-201ENST00000324862 ANKRD33BA6NCL7 494 aa13.86□□□□□ -0.19
PRPF3-201ENST00000324862 CHP2O43745 196 aa13.86□□□□□ -0.19
PRPF3-201ENST00000324862 ALPLP05186 524 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms