RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 ALDOCP09972 364 aaKnown RBP10.95□□□□□ -0.66
TPM3-204ENST00000323144 OR12D1P0DN82 309 aa10.95□□□□□ -0.66
TPM3-204ENST00000323144 MATN1P21941 496 aa10.95□□□□□ -0.66
TPM3-204ENST00000323144 ADH6P28332 368 aa10.95□□□□□ -0.66
TPM3-204ENST00000323144 ABCE1P61221 599 aaKnown RBP10.95□□□□□ -0.66
TPM3-204ENST00000323144 KRTAP1-1Q07627 177 aa10.95□□□□□ -0.66
TPM3-204ENST00000323144 MAD2L1Q13257 205 aaPredicted RBP10.95□□□□□ -0.66
TPM3-204ENST00000323144 ZNF141Q15928 474 aa10.95□□□□□ -0.66
TPM3-204ENST00000323144 ARHGAP11BQ3KRB8 267 aa10.95□□□□□ -0.66
TPM3-204ENST00000323144 TIGD2Q4W5G0 525 aa10.95□□□□□ -0.66
TPM3-204ENST00000323144 SAXO2Q658L1 398 aa10.95□□□□□ -0.66
TPM3-204ENST00000323144 TYW3Q6IPR3 259 aaKnown RBP10.95□□□□□ -0.66
TPM3-204ENST00000323144 HEPHL1Q6MZM0 1159 aa10.95□□□□□ -0.66
TPM3-204ENST00000323144 FRRS1Q6ZNA5 592 aa10.95□□□□□ -0.66
TPM3-204ENST00000323144 C6orf120Q7Z4R8 191 aa10.95□□□□□ -0.66
TPM3-204ENST00000323144 MREGQ8N565 214 aa10.95□□□□□ -0.66
TPM3-204ENST00000323144 ZNF611Q8N823 705 aa10.95□□□□□ -0.66
TPM3-204ENST00000323144 TMEM171Q8WVE6 324 aa10.95□□□□□ -0.66
TPM3-204ENST00000323144 KISS1RQ969F8 398 aaPredicted RBP10.95□□□□□ -0.66
TPM3-204ENST00000323144 REXO5Q96IC2 774 aaKnown RBP10.95□□□□□ -0.66
TPM3-204ENST00000323144 PRPF18Q99633 342 aaKnown RBP10.95□□□□□ -0.66
TPM3-204ENST00000323144 TACO1Q9BSH4 297 aaKnown RBP10.95□□□□□ -0.66
TPM3-204ENST00000323144 THUMPD3Q9BV44 507 aaKnown RBP10.95□□□□□ -0.66
TPM3-204ENST00000323144 NUF2Q9BZD4 464 aa10.95□□□□□ -0.66
TPM3-204ENST00000323144 ROPN1BQ9BZX4 212 aaPredicted RBP10.95□□□□□ -0.66
TPM3-204ENST00000323144 OR10A4Q9H209 315 aa10.95□□□□□ -0.66
TPM3-204ENST00000323144 ROPN1Q9HAT0 212 aaPredicted RBP10.95□□□□□ -0.66
TPM3-204ENST00000323144 BCO1Q9HAY6 547 aa10.95□□□□□ -0.66
TPM3-204ENST00000323144 NPAP1Q9NZP6 1156 aa10.95□□□□□ -0.66
TPM3-204ENST00000323144 TLN2Q9Y4G6 2542 aa10.94□□□□□ -0.66
TPM3-204ENST00000323144 INAFM1C9JVW0 142 aa10.94□□□□□ -0.66
TPM3-204ENST00000323144 AP3D1O14617 1153 aa10.94□□□□□ -0.66
TPM3-204ENST00000323144 EIF4E2O60573 245 aaKnown RBP10.94□□□□□ -0.66
TPM3-204ENST00000323144 DNAJA2O60884 412 aa10.94□□□□□ -0.66
TPM3-204ENST00000323144 STX11O75558 287 aa10.94□□□□□ -0.66
TPM3-204ENST00000323144 CNOT4O95628 575 aaKnown RBP10.94□□□□□ -0.66
TPM3-204ENST00000323144 CPSF4O95639 269 aaKnown RBP10.94□□□□□ -0.66
TPM3-204ENST00000323144 AK1P00568 194 aa10.94□□□□□ -0.66
TPM3-204ENST00000323144 SOD3P08294 240 aa10.94□□□□□ -0.66
TPM3-204ENST00000323144 PABPC4LP0CB38 370 aaKnown RBP10.94□□□□□ -0.66
TPM3-204ENST00000323144 DHRS4L1P0CG22 281 aa10.94□□□□□ -0.66
TPM3-204ENST00000323144 COX5AP20674 150 aa10.94□□□□□ -0.66
TPM3-204ENST00000323144 PGM1P36871 562 aa10.94□□□□□ -0.66
TPM3-204ENST00000323144 OR3A2P47893 321 aa10.94□□□□□ -0.66
TPM3-204ENST00000323144 KHKP50053 298 aa10.94□□□□□ -0.66
TPM3-204ENST00000323144 NME5P56597 212 aa10.94□□□□□ -0.66
TPM3-204ENST00000323144 SESN3P58005 492 aa10.94□□□□□ -0.66
TPM3-204ENST00000323144 BSPH1Q075Z2 132 aa10.94□□□□□ -0.66
TPM3-204ENST00000323144 SPOCK1Q08629 439 aa10.94□□□□□ -0.66
TPM3-204ENST00000323144 MERTKQ12866 999 aa10.94□□□□□ -0.66
TPM3-204ENST00000323144 MPP2Q14168 576 aa10.94□□□□□ -0.66
TPM3-204ENST00000323144 CAPRIN1Q14444 709 aaKnown RBP10.94□□□□□ -0.66
TPM3-204ENST00000323144 STK11Q15831 433 aa10.94□□□□□ -0.66
TPM3-204ENST00000323144 SYT14P1Q58G82 188 aa10.94□□□□□ -0.66
TPM3-204ENST00000323144 SFRP5Q5T4F7 317 aa10.94□□□□□ -0.66
TPM3-204ENST00000323144 WDR93Q6P2C0 686 aa10.94□□□□□ -0.66
TPM3-204ENST00000323144 PRSS57Q6UWY2 283 aa10.94□□□□□ -0.66
TPM3-204ENST00000323144 DNAJC14Q6Y2X3 702 aaPredicted RBP10.94□□□□□ -0.66
TPM3-204ENST00000323144 BHLHA15Q7RTS1 189 aaPredicted RBP10.94□□□□□ -0.66
TPM3-204ENST00000323144 PRIMA1Q86XR5 153 aa10.94□□□□□ -0.66
TPM3-204ENST00000323144 NATD1Q8N6N6 113 aa10.94□□□□□ -0.66
TPM3-204ENST00000323144 MAPK1IP1LQ8NDC0 245 aa10.94□□□□□ -0.66
TPM3-204ENST00000323144 STEAP2Q8NFT2 490 aa10.94□□□□□ -0.66
TPM3-204ENST00000323144 OR8J2Q8NGG1 315 aa10.94□□□□□ -0.66
TPM3-204ENST00000323144 MIPOL1Q8TD10 442 aa10.94□□□□□ -0.66
TPM3-204ENST00000323144 ST8SIA1Q92185 356 aa10.94□□□□□ -0.66
TPM3-204ENST00000323144 ZNF75CPQ92670 426 aaPredicted RBP10.94□□□□□ -0.66
TPM3-204ENST00000323144 ZNF775Q96BV0 537 aaPredicted RBP10.94□□□□□ -0.66
TPM3-204ENST00000323144 TEX37Q96LM6 180 aa10.94□□□□□ -0.66
TPM3-204ENST00000323144 TMEM109Q9BVC6 243 aa10.94□□□□□ -0.66
TPM3-204ENST00000323144 DPY30Q9C005 99 aa10.94□□□□□ -0.66
TPM3-204ENST00000323144 OR11A1Q9GZK7 315 aa10.94□□□□□ -0.66
TPM3-204ENST00000323144 LAT2Q9GZY6 243 aa10.94□□□□□ -0.66
TPM3-204ENST00000323144 TIGARQ9NQ88 270 aa10.94□□□□□ -0.66
TPM3-204ENST00000323144 ZNF701Q9NV72 531 aaPredicted RBP10.94□□□□□ -0.66
TPM3-204ENST00000323144 KLHL9Q9P2J3 617 aa10.94□□□□□ -0.66
TPM3-204ENST00000323144 LAMP3Q9UQV4 416 aa10.94□□□□□ -0.66
TPM3-204ENST00000323144 RAP2CQ9Y3L5 183 aa10.94□□□□□ -0.66
TPM3-204ENST00000323144 WDR45Q9Y484 360 aa10.94□□□□□ -0.66
TPM3-204ENST00000323144 MAGED1Q9Y5V3 778 aaPredicted RBP10.94□□□□□ -0.66
TPM3-204ENST00000323144 USF3Q68DE3 2245 aa10.94□□□□□ -0.66
TPM3-204ENST00000323144 E9PBE3 544 aa10.93□□□□□ -0.66
TPM3-204ENST00000323144 RGS16O15492 202 aaPredicted RBP10.93□□□□□ -0.66
TPM3-204ENST00000323144 CYTIPO60759 359 aa10.93□□□□□ -0.66
TPM3-204ENST00000323144 RAMP1O60894 148 aa10.93□□□□□ -0.66
TPM3-204ENST00000323144 PRKD3O94806 890 aa10.93□□□□□ -0.66
TPM3-204ENST00000323144 IGHV3-9P01782 118 aa10.93□□□□□ -0.66
TPM3-204ENST00000323144 YES1P07947 543 aa10.93□□□□□ -0.66
TPM3-204ENST00000323144 PAX1P15863 534 aa10.93□□□□□ -0.66
TPM3-204ENST00000323144 IGHV1-2P23083 117 aa10.93□□□□□ -0.66
TPM3-204ENST00000323144 CDKN1AP38936 164 aa10.93□□□□□ -0.66
TPM3-204ENST00000323144 CDKN2CP42773 168 aa10.93□□□□□ -0.66
TPM3-204ENST00000323144 DIO1P49895 249 aa10.93□□□□□ -0.66
TPM3-204ENST00000323144 ATP5J2P56134 94 aa10.93□□□□□ -0.66
TPM3-204ENST00000323144 RAC3P60763 192 aa10.93□□□□□ -0.66
TPM3-204ENST00000323144 RPS4XP62701 263 aaKnown RBP10.93□□□□□ -0.66
TPM3-204ENST00000323144 RASGEF1BQ0VAM2 473 aa10.93□□□□□ -0.66
TPM3-204ENST00000323144 FAM174BQ3ZCQ3 159 aa10.93□□□□□ -0.66
TPM3-204ENST00000323144 NCMAPQ5T1S8 102 aa10.93□□□□□ -0.66
TPM3-204ENST00000323144 BHLHB9Q6PI77 547 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms