RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 CHCHD2P9Q5T1J5 151 aaPredicted RBP19■□□□□ 0.63
TTC39C-202ENST00000317571 GRAMD2AQ8IUY3 354 aa19■□□□□ 0.63
TTC39C-202ENST00000317571 KLHDC7BQ96G42 594 aa19■□□□□ 0.63
TTC39C-202ENST00000317571 OR51V1Q9H2C8 321 aa19■□□□□ 0.63
TTC39C-202ENST00000317571 TP63Q9H3D4 680 aaPredicted RBP19■□□□□ 0.63
TTC39C-202ENST00000317571 MOV10Q9HCE1 1003 aaKnown RBP19■□□□□ 0.63
TTC39C-202ENST00000317571 PCDHGB2Q9Y5G2 931 aa19■□□□□ 0.63
TTC39C-202ENST00000317571 RCBTB2O95199 551 aa18.99■□□□□ 0.63
TTC39C-202ENST00000317571 HLA-DPB1P04440 258 aa18.99■□□□□ 0.63
TTC39C-202ENST00000317571 GYPBP06028 91 aa18.99■□□□□ 0.63
TTC39C-202ENST00000317571 MAOAP21397 527 aa18.99■□□□□ 0.63
TTC39C-202ENST00000317571 COL19A1Q14993 1142 aa18.99■□□□□ 0.63
TTC39C-202ENST00000317571 KIRREL2Q6UWL6 708 aa18.99■□□□□ 0.63
TTC39C-202ENST00000317571 OR6F1Q8NGZ6 308 aa18.99■□□□□ 0.63
TTC39C-202ENST00000317571 PMM1Q92871 262 aa18.99■□□□□ 0.63
TTC39C-202ENST00000317571 TEAD3Q99594 435 aa18.99■□□□□ 0.63
TTC39C-202ENST00000317571 MTCH2Q9Y6C9 303 aa18.99■□□□□ 0.63
TTC39C-202ENST00000317571 GTPBP1O00178 669 aaKnown RBP18.99■□□□□ 0.63
TTC39C-202ENST00000317571 GNB5O14775 395 aa18.99■□□□□ 0.63
TTC39C-202ENST00000317571 RNF13O43567 381 aa18.99■□□□□ 0.63
TTC39C-202ENST00000317571 HPGDSO60760 199 aa18.99■□□□□ 0.63
TTC39C-202ENST00000317571 CT45A8P0DMV1 189 aa18.99■□□□□ 0.63
TTC39C-202ENST00000317571 CT45A9P0DMV2 189 aa18.99■□□□□ 0.63
TTC39C-202ENST00000317571 PAICSP22234 425 aaKnown RBP18.99■□□□□ 0.63
TTC39C-202ENST00000317571 GABRA4P48169 554 aa18.99■□□□□ 0.63
TTC39C-202ENST00000317571 IGLV3-21P80748 117 aaPredicted RBP18.99■□□□□ 0.63
TTC39C-202ENST00000317571 CT45A2Q5DJT8 189 aa18.99■□□□□ 0.63
TTC39C-202ENST00000317571 XKRXQ6PP77 449 aa18.99■□□□□ 0.63
TTC39C-202ENST00000317571 GATAD2AQ86YP4 633 aa18.99■□□□□ 0.63
TTC39C-202ENST00000317571 RFLNBQ8N5W9 214 aa18.99■□□□□ 0.63
TTC39C-202ENST00000317571 ADGRL4Q9HBW9 690 aa18.99■□□□□ 0.63
TTC39C-202ENST00000317571 C14orf105Q9NVL8 296 aa18.99■□□□□ 0.63
TTC39C-202ENST00000317571 ASB6Q9NWX5 421 aa18.99■□□□□ 0.63
TTC39C-202ENST00000317571 LRIT1Q9P2V4 623 aa18.99■□□□□ 0.63
TTC39C-202ENST00000317571 TMEM5Q9Y2B1 443 aa18.99■□□□□ 0.63
TTC39C-202ENST00000317571 LRRN3E7EW58 273 aa18.98■□□□□ 0.63
TTC39C-202ENST00000317571 ATXN8OSP0DMR3 200 aa18.98■□□□□ 0.63
TTC39C-202ENST00000317571 RNH1P13489 461 aaKnown RBP18.98■□□□□ 0.63
TTC39C-202ENST00000317571 APEX1P27695 318 aaKnown RBP18.98■□□□□ 0.63
TTC39C-202ENST00000317571 GPR3P46089 330 aa18.98■□□□□ 0.63
TTC39C-202ENST00000317571 ZNF267Q14586 743 aaPredicted RBP18.98■□□□□ 0.63
TTC39C-202ENST00000317571 ALG10BQ5I7T1 473 aa18.98■□□□□ 0.63
TTC39C-202ENST00000317571 ZNF544Q6NX49 715 aa18.98■□□□□ 0.63
TTC39C-202ENST00000317571 LINC00114Q6XXX2 140 aa18.98■□□□□ 0.63
TTC39C-202ENST00000317571 ARL14Q8N4G2 192 aa18.98■□□□□ 0.63
TTC39C-202ENST00000317571 OR10H4Q8NGA5 316 aa18.98■□□□□ 0.63
TTC39C-202ENST00000317571 LMF1Q96S06 567 aa18.98■□□□□ 0.63
TTC39C-202ENST00000317571 SOSTQ9BQB4 213 aa18.98■□□□□ 0.63
TTC39C-202ENST00000317571 LRRN3Q9H3W5 708 aa18.98■□□□□ 0.63
TTC39C-202ENST00000317571 ZNF576Q9H609 170 aa18.98■□□□□ 0.63
TTC39C-202ENST00000317571 NPAP1Q9NZP6 1156 aa18.98■□□□□ 0.63
TTC39C-202ENST00000317571 PRR23D1E9PI22 279 aaPredicted RBP18.98■□□□□ 0.63
TTC39C-202ENST00000317571 AGRPO00253 132 aa18.98■□□□□ 0.63
TTC39C-202ENST00000317571 PRR23D2P0DMB1 279 aaPredicted RBP18.98■□□□□ 0.63
TTC39C-202ENST00000317571 GAAP10253 952 aa18.98■□□□□ 0.63
TTC39C-202ENST00000317571 TCEA1P23193 301 aaKnown RBP18.98■□□□□ 0.63
TTC39C-202ENST00000317571 STX4Q12846 297 aa18.98■□□□□ 0.63
TTC39C-202ENST00000317571 FGFBP1Q14512 234 aa18.98■□□□□ 0.63
TTC39C-202ENST00000317571 P2RY14Q15391 338 aa18.98■□□□□ 0.63
TTC39C-202ENST00000317571 ATAD3CQ5T2N8 411 aa18.98■□□□□ 0.63
TTC39C-202ENST00000317571 ARMC4Q5T2S8 1044 aa18.98■□□□□ 0.63
TTC39C-202ENST00000317571 BABAM2Q9NXR7 383 aa18.98■□□□□ 0.63
TTC39C-202ENST00000317571 MALT1Q9UDY8 824 aa18.98■□□□□ 0.63
TTC39C-202ENST00000317571 ZNF221Q9UK13 617 aa18.98■□□□□ 0.63
TTC39C-202ENST00000317571 SLC35A3Q9Y2D2 325 aa18.98■□□□□ 0.63
TTC39C-202ENST00000317571 CTNSO60931 367 aa18.97■□□□□ 0.63
TTC39C-202ENST00000317571 KRT8P05787 483 aa18.97■□□□□ 0.63
TTC39C-202ENST00000317571 CHRNB1P11230 501 aa18.97■□□□□ 0.63
TTC39C-202ENST00000317571 GFERP55789 205 aa18.97■□□□□ 0.63
TTC39C-202ENST00000317571 E2F1Q01094 437 aa18.97■□□□□ 0.63
TTC39C-202ENST00000317571 ZNF85Q03923 595 aa18.97■□□□□ 0.63
TTC39C-202ENST00000317571 GALEQ14376 348 aa18.97■□□□□ 0.63
TTC39C-202ENST00000317571 FAM27D1Q5T7N8 215 aa18.97■□□□□ 0.63
TTC39C-202ENST00000317571 RPL13AP3Q6NVV1 102 aa18.97■□□□□ 0.63
TTC39C-202ENST00000317571 CNIH2Q6PI25 160 aa18.97■□□□□ 0.63
TTC39C-202ENST00000317571 ZNF517Q6ZMY9 492 aaPredicted RBP18.97■□□□□ 0.63
TTC39C-202ENST00000317571 SSX6Q7RTT6 188 aa18.97■□□□□ 0.63
TTC39C-202ENST00000317571 CDK20Q8IZL9 346 aa18.97■□□□□ 0.63
TTC39C-202ENST00000317571 CADM2Q8N3J6 435 aa18.97■□□□□ 0.63
TTC39C-202ENST00000317571 LSMEM1Q8N8F7 131 aa18.97■□□□□ 0.63
TTC39C-202ENST00000317571 RBM18Q96H35 190 aaKnown RBP18.97■□□□□ 0.63
TTC39C-202ENST00000317571 C11orf54Q9H0W9 315 aaPredicted RBP18.97■□□□□ 0.63
TTC39C-202ENST00000317571 MMP28Q9H239 520 aa18.97■□□□□ 0.63
TTC39C-202ENST00000317571 ERVK-19Q9WJR5 959 aa18.97■□□□□ 0.63
TTC39C-202ENST00000317571 FAM86C2PA6NEL3 165 aa18.96■□□□□ 0.63
TTC39C-202ENST00000317571 PLA2G10O15496 165 aa18.96■□□□□ 0.63
TTC39C-202ENST00000317571 SEC14L5O43304 696 aa18.96■□□□□ 0.63
TTC39C-202ENST00000317571 HCN1O60741 890 aa18.96■□□□□ 0.63
TTC39C-202ENST00000317571 TMCC2O75069 709 aa18.96■□□□□ 0.63
TTC39C-202ENST00000317571 CLPSP04118 112 aa18.96■□□□□ 0.63
TTC39C-202ENST00000317571 CAPZBP47756 277 aa18.96■□□□□ 0.63
TTC39C-202ENST00000317571 SLC16A1P53985 500 aa18.96■□□□□ 0.63
TTC39C-202ENST00000317571 RPS7P62081 194 aaKnown RBP18.96■□□□□ 0.63
TTC39C-202ENST00000317571 CRYZQ08257 329 aaKnown RBP18.96■□□□□ 0.63
TTC39C-202ENST00000317571 ZNF141Q15928 474 aa18.96■□□□□ 0.63
TTC39C-202ENST00000317571 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.96■□□□□ 0.63
TTC39C-202ENST00000317571 OAFQ86UD1 273 aa18.96■□□□□ 0.63
TTC39C-202ENST00000317571 LRRC17Q8N6Y2 441 aa18.96■□□□□ 0.63
TTC39C-202ENST00000317571 ZSCAN1Q8NBB4 408 aa18.96■□□□□ 0.63
TTC39C-202ENST00000317571 OR4C3Q8NH37 302 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms