RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 ADAMTS6Q9UKP5 1117 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 ADAM23O75077 832 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 TANGO2Q6ICL3 276 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 COMMD6Q7Z4G1 85 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 GRASPQ7Z6J2 395 aaPredicted RBP14.57□□□□□ -0.08
HCFC1-201ENST00000310441 PRR18Q8N4B5 295 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 CMTM2Q8TAZ6 248 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 PXYLP1Q8TE99 480 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 OCSTAMPQ9BR26 566 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 MED17Q9NVC6 651 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 MRPL15Q9P015 296 aaKnown RBP14.57□□□□□ -0.08
HCFC1-201ENST00000310441 E9PI62 339 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 ETV5P41161 510 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 FAM162BQ5T6X4 162 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 ZNF439Q8NDP4 499 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 CHAC2Q8WUX2 184 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 GKN1Q9NS71 199 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 WNT6Q9Y6F9 365 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 ZNF860A6NHJ4 632 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 SULT2B1O00204 365 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 ZNF623O75123 536 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 HNF4GQ14541 408 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 SLC15A4Q8N697 577 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 DDX1Q92499 740 aaKnown RBP14.57□□□□□ -0.08
HCFC1-201ENST00000310441 SFXN2Q96NB2 322 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 PLEK2Q9NYT0 353 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 HMGCLP35914 325 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 FABP6P51161 128 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 GPR19Q15760 415 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 TMEM135Q86UB9 458 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 M1APQ8TC57 530 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 DUSP23Q9BVJ7 150 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 OR6C2Q9NZP2 312 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 ZNF223Q9UK11 482 aaPredicted RBP14.57□□□□□ -0.08
HCFC1-201ENST00000310441 SOX3P41225 446 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 EID2Q8N6I1 236 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 KDF1Q8NAX2 398 aaPredicted RBP14.57□□□□□ -0.08
HCFC1-201ENST00000310441 UQCC2Q9BRT2 126 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 CBY1Q9Y3M2 126 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.57□□□□□ -0.08
HCFC1-201ENST00000310441 PIK3C2AO00443 1686 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 E7ESA3 106 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 DEFB132Q7Z7B7 95 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 RBMXL3Q8N7X1 1067 aaKnown RBP14.57□□□□□ -0.08
HCFC1-201ENST00000310441 ZNF516Q92618 1163 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 FCRL1Q96LA6 429 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 C1QTNF2Q9BXJ5 285 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 CACFD1Q9UGQ2 172 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 GJD2Q9UKL4 321 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 SLC35E2BP0CK96 405 aa14.56□□□□□ -0.08
HCFC1-201ENST00000310441 CDK5R2Q13319 367 aa14.56□□□□□ -0.08
HCFC1-201ENST00000310441 TATDN3Q17R31 274 aa14.56□□□□□ -0.08
HCFC1-201ENST00000310441 ZNF574Q6ZN55 896 aaPredicted RBP14.56□□□□□ -0.08
HCFC1-201ENST00000310441 SPHK2Q9NRA0 654 aa14.56□□□□□ -0.08
HCFC1-201ENST00000310441 THSD1Q9NS62 852 aa14.56□□□□□ -0.08
HCFC1-201ENST00000310441 EHFQ9NZC4 300 aa14.56□□□□□ -0.08
HCFC1-201ENST00000310441 COL1A1P02452 1464 aaPredicted RBP14.56□□□□□ -0.08
HCFC1-201ENST00000310441 TIAM2Q8IVF5 1701 aa14.56□□□□□ -0.08
HCFC1-201ENST00000310441 SURF4O15260 269 aa14.56□□□□□ -0.08
HCFC1-201ENST00000310441 APOA2P02652 100 aa14.56□□□□□ -0.08
HCFC1-201ENST00000310441 PTNP21246 168 aa14.56□□□□□ -0.08
HCFC1-201ENST00000310441 STT3AP46977 705 aa14.56□□□□□ -0.08
HCFC1-201ENST00000310441 LRRC56Q8IYG6 542 aaPredicted RBP14.56□□□□□ -0.08
HCFC1-201ENST00000310441 ABHD11Q8NFV4 315 aa14.56□□□□□ -0.08
HCFC1-201ENST00000310441 MRGPRX2Q96LB1 330 aa14.56□□□□□ -0.08
HCFC1-201ENST00000310441 PHIPQ8WWQ0 1821 aa14.56□□□□□ -0.08
HCFC1-201ENST00000310441 RPS10-NUDT3A0A1W2PQS6 291 aa14.56□□□□□ -0.08
HCFC1-201ENST00000310441 MEIOCA2RUB1 952 aa14.56□□□□□ -0.08
HCFC1-201ENST00000310441 ARPC1BO15143 372 aaKnown RBP14.56□□□□□ -0.08
HCFC1-201ENST00000310441 GABRR1P24046 479 aa14.56□□□□□ -0.08
HCFC1-201ENST00000310441 RPS10P46783 165 aaKnown RBP14.56□□□□□ -0.08
HCFC1-201ENST00000310441 MLLT11Q13015 90 aaPredicted RBP14.56□□□□□ -0.08
HCFC1-201ENST00000310441 PLPP5Q8NEB5 264 aa14.56□□□□□ -0.08
HCFC1-201ENST00000310441 OR11L1Q8NGX0 322 aa14.56□□□□□ -0.08
HCFC1-201ENST00000310441 THAP3Q8WTV1 239 aaPredicted RBP14.56□□□□□ -0.08
HCFC1-201ENST00000310441 SEC22CQ9BRL7 303 aa14.56□□□□□ -0.08
HCFC1-201ENST00000310441 KATNB1Q9BVA0 655 aa14.56□□□□□ -0.08
HCFC1-201ENST00000310441 DCAF7P61962 342 aa14.56□□□□□ -0.08
HCFC1-201ENST00000310441 KIR2DS3Q14952 304 aa14.56□□□□□ -0.08
HCFC1-201ENST00000310441 SLC35F3Q8IY50 421 aa14.56□□□□□ -0.08
HCFC1-201ENST00000310441 ZNF281Q9Y2X9 895 aa14.56□□□□□ -0.08
HCFC1-201ENST00000310441 MAST2Q6P0Q8 1798 aa14.56□□□□□ -0.08
HCFC1-201ENST00000310441 HOXA1P49639 335 aaPredicted RBP14.56□□□□□ -0.08
HCFC1-201ENST00000310441 DOC2AQ14183 400 aa14.56□□□□□ -0.08
HCFC1-201ENST00000310441 BAGE3Q86Y29 109 aa14.56□□□□□ -0.08
HCFC1-201ENST00000310441 BAGE2Q86Y30 109 aa14.56□□□□□ -0.08
HCFC1-201ENST00000310441 FTSJ1Q9UET6 329 aa14.56□□□□□ -0.08
HCFC1-201ENST00000310441 SEC14L6B5MCN3 397 aa14.56□□□□□ -0.08
HCFC1-201ENST00000310441 H3BMQ9 156 aa14.56□□□□□ -0.08
HCFC1-201ENST00000310441 HHEXQ03014 270 aa14.56□□□□□ -0.08
HCFC1-201ENST00000310441 SLC14A1Q13336 389 aa14.56□□□□□ -0.08
HCFC1-201ENST00000310441 ZNF322Q6U7Q0 402 aaPredicted RBP14.56□□□□□ -0.08
HCFC1-201ENST00000310441 WDR5BQ86VZ2 330 aa14.56□□□□□ -0.08
HCFC1-201ENST00000310441 FAM174AQ8TBP5 190 aa14.56□□□□□ -0.08
HCFC1-201ENST00000310441 CEPT1Q9Y6K0 416 aa14.56□□□□□ -0.08
HCFC1-201ENST00000310441 RFXAPO00287 272 aa14.56□□□□□ -0.08
HCFC1-201ENST00000310441 NADSYN1Q6IA69 706 aa14.56□□□□□ -0.08
HCFC1-201ENST00000310441 KANSL1Q7Z3B3 1105 aa14.56□□□□□ -0.08
HCFC1-201ENST00000310441 TMEM200AQ86VY9 491 aa14.56□□□□□ -0.08
HCFC1-201ENST00000310441 ARPC5LQ9BPX5 153 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms