RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 A0A087WV62 115 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 A0A1W2PRG6 482 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 BHLHE40O14503 412 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 CHRNB1P11230 501 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 RAB25P57735 213 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 MRPS15P82914 257 aaKnown RBP10.66□□□□□ -0.7
PTPN2-201ENST00000309660 PLAURQ03405 335 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 ZNF57Q68EA5 555 aaPredicted RBP10.66□□□□□ -0.7
PTPN2-201ENST00000309660 RCBTB1Q8NDN9 531 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 TOR1AIP2Q8NFQ8 470 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 LMF1Q96S06 567 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 STACQ99469 402 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 TEAD3Q99594 435 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 LRRC61Q9BV99 259 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 C8orf33Q9H7E9 229 aaPredicted RBP10.66□□□□□ -0.7
PTPN2-201ENST00000309660 MED17Q9NVC6 651 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 BABAM2Q9NXR7 383 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 ZNF223Q9UK11 482 aaPredicted RBP10.66□□□□□ -0.7
PTPN2-201ENST00000309660 ADAM18Q9Y3Q7 739 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 HS3ST3A1Q9Y663 406 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 TRDV1A0A1B0GX56 115 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 FAM171A2A8MVW0 826 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 TGFBR3LH3BV60 316 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 PSMD9O00233 223 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 POLR1CO15160 346 aaPredicted RBP10.66□□□□□ -0.7
PTPN2-201ENST00000309660 HCN1O60741 890 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 COQ9O75208 318 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 SLC35E2P0CK97 266 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 RNH1P13489 461 aaKnown RBP10.66□□□□□ -0.7
PTPN2-201ENST00000309660 HPGDP15428 266 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 ZNF3P17036 446 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 SHC1P29353 583 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 OR12D2P58182 307 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 E2F1Q01094 437 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 POMZP3Q6PJE2 187 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 OR13C5Q8NGS8 318 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 BRIX1Q8TDN6 353 aaKnown RBP10.66□□□□□ -0.7
PTPN2-201ENST00000309660 SEMA6CQ9H3T2 930 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 SATB2Q9UPW6 733 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 OR5K4A6NMS3 321 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 GTPBP1O00178 669 aaKnown RBP10.66□□□□□ -0.7
PTPN2-201ENST00000309660 CSTAP01040 98 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 NGFRP08138 427 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 PSKH1P11801 424 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 GRPRP30550 384 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 RCVRNP35243 200 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 GFERP55789 205 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 CTBP2P56545 445 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 TP53I3Q53FA7 332 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 OR6K6Q8NGW6 343 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 OR4C3Q8NH37 302 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 OR5W2Q8NH69 310 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 SLC22A4Q9H015 551 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 HDHD2Q9H0R4 259 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 CCDC86Q9H6F5 360 aaKnown RBP10.66□□□□□ -0.7
PTPN2-201ENST00000309660 Q9N2J8 555 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 TRIM36Q9NQ86 728 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 WSB2Q9NYS7 404 aaPredicted RBP10.66□□□□□ -0.7
PTPN2-201ENST00000309660 ZNF221Q9UK13 617 aa10.66□□□□□ -0.7
PTPN2-201ENST00000309660 MRPS33Q9Y291 106 aaKnown RBP10.66□□□□□ -0.7
PTPN2-201ENST00000309660 ABCA7Q8IZY2 2146 aa10.65□□□□□ -0.7
PTPN2-201ENST00000309660 CLDN4O14493 209 aa10.65□□□□□ -0.7
PTPN2-201ENST00000309660 RNF13O43567 381 aa10.65□□□□□ -0.7
PTPN2-201ENST00000309660 CCINQ13939 588 aa10.65□□□□□ -0.7
PTPN2-201ENST00000309660 DEFB133Q30KQ1 61 aa10.65□□□□□ -0.7
PTPN2-201ENST00000309660 NKAIN2Q5VXU1 208 aa10.65□□□□□ -0.7
PTPN2-201ENST00000309660 XKRXQ6PP77 449 aa10.65□□□□□ -0.7
PTPN2-201ENST00000309660 KIRREL2Q6UWL6 708 aa10.65□□□□□ -0.7
PTPN2-201ENST00000309660 SYT9Q86SS6 491 aa10.65□□□□□ -0.7
PTPN2-201ENST00000309660 LNX2Q8N448 690 aa10.65□□□□□ -0.7
PTPN2-201ENST00000309660 MSLNLQ96KJ4 702 aa10.65□□□□□ -0.7
PTPN2-201ENST00000309660 ZNF559Q9BR84 538 aa10.65□□□□□ -0.7
PTPN2-201ENST00000309660 NDC1Q9BTX1 674 aa10.65□□□□□ -0.7
PTPN2-201ENST00000309660 NEK6Q9HC98 313 aa10.65□□□□□ -0.7
PTPN2-201ENST00000309660 POMT2Q9UKY4 750 aa10.65□□□□□ -0.7
PTPN2-201ENST00000309660 IGHA1P01876 353 aa10.65□□□□□ -0.7
PTPN2-201ENST00000309660 BLKP51451 505 aa10.65□□□□□ -0.7
PTPN2-201ENST00000309660 OR10A3P58181 314 aa10.65□□□□□ -0.7
PTPN2-201ENST00000309660 KCNAB1Q14722 419 aa10.65□□□□□ -0.7
PTPN2-201ENST00000309660 GLYR1Q49A26 553 aaPredicted RBP10.65□□□□□ -0.7
PTPN2-201ENST00000309660 ZNF544Q6NX49 715 aa10.65□□□□□ -0.7
PTPN2-201ENST00000309660 TMEM91Q6ZNR0 172 aa10.65□□□□□ -0.7
PTPN2-201ENST00000309660 ASB18Q6ZVZ8 466 aa10.65□□□□□ -0.7
PTPN2-201ENST00000309660 CEACAM19Q7Z692 300 aa10.65□□□□□ -0.7
PTPN2-201ENST00000309660 RNF113BQ8IZP6 322 aaKnown RBP10.65□□□□□ -0.7
PTPN2-201ENST00000309660 RFLNBQ8N5W9 214 aa10.65□□□□□ -0.7
PTPN2-201ENST00000309660 ZNF485Q8NCK3 441 aa10.65□□□□□ -0.7
PTPN2-201ENST00000309660 SMRP1Q8NCR6 262 aa10.65□□□□□ -0.7
PTPN2-201ENST00000309660 TSTD1Q8NFU3 115 aa10.65□□□□□ -0.7
PTPN2-201ENST00000309660 OR52N1Q8NH53 320 aa10.65□□□□□ -0.7
PTPN2-201ENST00000309660 ITFG2Q969R8 447 aa10.65□□□□□ -0.7
PTPN2-201ENST00000309660 WACQ9BTA9 647 aa10.65□□□□□ -0.7
PTPN2-201ENST00000309660 CMC2Q9NRP2 79 aa10.65□□□□□ -0.7
PTPN2-201ENST00000309660 PNO1Q9NRX1 252 aaKnown RBP10.65□□□□□ -0.7
PTPN2-201ENST00000309660 TRAPPC4Q9Y296 219 aa10.65□□□□□ -0.7
PTPN2-201ENST00000309660 EXOGQ9Y2C4 368 aaKnown RBP10.65□□□□□ -0.7
PTPN2-201ENST00000309660 MRPS7Q9Y2R9 242 aaKnown RBP10.65□□□□□ -0.7
PTPN2-201ENST00000309660 IER3IP1Q9Y5U9 82 aa10.65□□□□□ -0.7
PTPN2-201ENST00000309660 SPAG17Q6Q759 2223 aa10.65□□□□□ -0.71
PTPN2-201ENST00000309660 MEIOCA2RUB1 952 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms