RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 SNRPB2P08579 225 aaKnown RBP7.58□□□□□ -1.2
CHD6-201ENST00000309279 COX7A2P14406 83 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 ITGA2P17301 1181 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 PTNP21246 168 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 SOX18P35713 384 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 FRKP42685 505 aaPredicted RBP7.58□□□□□ -1.2
CHD6-201ENST00000309279 MRPL19P49406 292 aaKnown RBP7.58□□□□□ -1.2
CHD6-201ENST00000309279 GLO1Q04760 184 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 MGAT2Q10469 447 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 IL18Q14116 193 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 ZNF750Q32MQ0 723 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 LINC00303Q3SY05 128 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 C4orf48Q5BLP8 95 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 ZNF468Q5VIY5 522 aaPredicted RBP7.58□□□□□ -1.2
CHD6-201ENST00000309279 CGB2Q6NT52 195 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 H3F3CQ6NXT2 135 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 PAOXQ6QHF9 649 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 DGAT2L6Q6ZPD8 337 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 RTL4Q6ZR62 310 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 ACAD11Q709F0 780 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 KBTBD2Q8IY47 623 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 ARMC10Q8N2F6 343 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 LRRC25Q8N386 305 aaPredicted RBP7.58□□□□□ -1.2
CHD6-201ENST00000309279 GALNT16Q8N428 558 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 KLHL36Q8N4N3 616 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 NATD1Q8N6N6 113 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 OR14A16Q8NHC5 309 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 SUN3Q8TAQ9 357 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 WFDC12Q8WWY7 111 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 PSMF1Q92530 271 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 EXTL1Q92935 676 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 RIT1Q92963 219 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 EXOSC8Q96B26 276 aaKnown RBP7.58□□□□□ -1.2
CHD6-201ENST00000309279 PPWD1Q96BP3 646 aaKnown RBP7.58□□□□□ -1.2
CHD6-201ENST00000309279 CTHRC1Q96CG8 243 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 KLHL29Q96CT2 875 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 COQ8BQ96D53 544 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 SENP5Q96HI0 755 aaPredicted RBP7.58□□□□□ -1.2
CHD6-201ENST00000309279 DGAT2Q96PD7 388 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 PARD6GQ9BYG4 376 aaPredicted RBP7.58□□□□□ -1.2
CHD6-201ENST00000309279 RTN4RQ9BZR6 473 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 SEMA4CQ9C0C4 833 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 OR51V1Q9H2C8 321 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 POFUT1Q9H488 388 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 CHODLQ9H9P2 273 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 CXorf21Q9HAI6 301 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 SDR39U1Q9NRG7 319 aaPredicted RBP7.58□□□□□ -1.2
CHD6-201ENST00000309279 PCDHB16Q9NRJ7 776 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 INIPQ9NRY2 104 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 ZNF275Q9NSD4 429 aaPredicted RBP7.58□□□□□ -1.2
CHD6-201ENST00000309279 PEF1Q9UBV8 284 aaKnown RBP7.58□□□□□ -1.2
CHD6-201ENST00000309279 PLEKHA6Q9Y2H5 1048 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 PUS1Q9Y606 427 aaKnown RBP eCLIP7.58□□□□□ -1.2
CHD6-201ENST00000309279 TLN1Q9Y490 2541 aaKnown RBP7.58□□□□□ -1.2
CHD6-201ENST00000309279 SPENQ96T58 3664 aaKnown RBP7.58□□□□□ -1.2
CHD6-201ENST00000309279 NOTOA8MTQ0 251 aa7.57□□□□□ -1.2
CHD6-201ENST00000309279 C12orf71A8MTZ7 269 aa7.57□□□□□ -1.2
CHD6-201ENST00000309279 A8MUA0 341 aa7.57□□□□□ -1.2
CHD6-201ENST00000309279 C22orf46C9J442 243 aa7.57□□□□□ -1.2
CHD6-201ENST00000309279 TSPAN4O14817 238 aa7.57□□□□□ -1.2
CHD6-201ENST00000309279 SCAMP2O15127 329 aaKnown RBP7.57□□□□□ -1.2
CHD6-201ENST00000309279 UBDO15205 165 aa7.57□□□□□ -1.2
CHD6-201ENST00000309279 OR10H2O60403 315 aa7.57□□□□□ -1.2
CHD6-201ENST00000309279 OR2C1O95371 312 aa7.57□□□□□ -1.2
CHD6-201ENST00000309279 TNNI3P19429 210 aa7.57□□□□□ -1.2
CHD6-201ENST00000309279 FUT1P19526 365 aa7.57□□□□□ -1.2
CHD6-201ENST00000309279 S1PR1P21453 382 aa7.57□□□□□ -1.2
CHD6-201ENST00000309279 ADH6P28332 368 aa7.57□□□□□ -1.2
CHD6-201ENST00000309279 MPIP34949 423 aa7.57□□□□□ -1.2
CHD6-201ENST00000309279 FEN1P39748 380 aaKnown RBP7.57□□□□□ -1.2
CHD6-201ENST00000309279 CORO7P57737 925 aa7.57□□□□□ -1.2
CHD6-201ENST00000309279 DUSP2Q05923 314 aa7.57□□□□□ -1.2
CHD6-201ENST00000309279 SCRN3Q0VDG4 424 aa7.57□□□□□ -1.2
CHD6-201ENST00000309279 FUT7Q11130 342 aa7.57□□□□□ -1.2
CHD6-201ENST00000309279 SGCBQ16585 318 aa7.57□□□□□ -1.2
CHD6-201ENST00000309279 GSTA3Q16772 222 aa7.57□□□□□ -1.2
CHD6-201ENST00000309279 BTBD16Q32M84 506 aa7.57□□□□□ -1.2
CHD6-201ENST00000309279 ZNF385BQ569K4 471 aa7.57□□□□□ -1.2
CHD6-201ENST00000309279 COLEC12Q5KU26 742 aa7.57□□□□□ -1.2
CHD6-201ENST00000309279 CST9LP1Q5W188 147 aa7.57□□□□□ -1.2
CHD6-201ENST00000309279 TMEM198Q66K66 360 aa7.57□□□□□ -1.2
CHD6-201ENST00000309279 PM20D2Q8IYS1 436 aa7.57□□□□□ -1.2
CHD6-201ENST00000309279 KRTCAP2Q8N6L1 136 aa7.57□□□□□ -1.2
CHD6-201ENST00000309279 AMER2Q8N7J2 671 aa7.57□□□□□ -1.2
CHD6-201ENST00000309279 OR7A2PQ8NGA2 310 aa7.57□□□□□ -1.2
CHD6-201ENST00000309279 ZNF675Q8TD23 568 aa7.57□□□□□ -1.2
CHD6-201ENST00000309279 ZNF721Q8TF20 911 aa7.57□□□□□ -1.2
CHD6-201ENST00000309279 TESCQ96BS2 214 aa7.57□□□□□ -1.2
CHD6-201ENST00000309279 PPCDCQ96CD2 204 aa7.57□□□□□ -1.2
CHD6-201ENST00000309279 FBXL20Q96IG2 436 aa7.57□□□□□ -1.2
CHD6-201ENST00000309279 LHPPQ9H008 270 aa7.57□□□□□ -1.2
CHD6-201ENST00000309279 RIMS4Q9H426 269 aaPredicted RBP7.57□□□□□ -1.2
CHD6-201ENST00000309279 SLAMF7Q9NQ25 335 aa7.57□□□□□ -1.2
CHD6-201ENST00000309279 ACSS1Q9NUB1 689 aaPredicted RBP7.57□□□□□ -1.2
CHD6-201ENST00000309279 TNFRSF10DQ9UBN6 386 aa7.57□□□□□ -1.2
CHD6-201ENST00000309279 ZNF639Q9UID6 485 aa7.57□□□□□ -1.2
CHD6-201ENST00000309279 SPATA2Q9UM82 520 aa7.57□□□□□ -1.2
CHD6-201ENST00000309279 CPAMD8Q8IZJ3 1885 aa7.57□□□□□ -1.2
CHD6-201ENST00000309279 KALRNO60229 2985 aa7.57□□□□□ -1.2
CHD6-201ENST00000309279 ZFYVE26Q68DK2 2539 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms