RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 ATP13A5Q4VNC0 1218 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 XKR6Q5GH73 641 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.53□□□□□ -1.68
CKS1B-201ENST00000308987 GCNT6Q5T4J0 391 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 FRMPD2BQ6IN97 320 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 ERAP2Q6P179 960 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 BRAT1Q6PJG6 821 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 AGTRAPQ6RW13 159 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 CCBE1Q6UXH8 406 aaPredicted RBP4.53□□□□□ -1.68
CKS1B-201ENST00000308987 MBOAT1Q6ZNC8 495 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 GDPD3Q7L5L3 318 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 THOC6Q86W42 341 aaKnown RBP4.53□□□□□ -1.68
CKS1B-201ENST00000308987 VRK3Q8IV63 474 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 LAS2Q8IYD9 372 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 UBQLNLQ8IYU4 475 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 TRAM1L1Q8N609 369 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 CLDN22Q8N7P3 220 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 ANKRD53Q8N9V6 530 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 SIMC1Q8NDZ2 872 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 PROKR2Q8NFJ6 384 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 OR7G3Q8NG95 312 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 OR4D9Q8NGE8 314 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 OR9Q1Q8NGQ5 310 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 SPPL2AQ8TCT8 520 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 SLC37A2Q8TED4 501 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 ASB15Q8WXK1 588 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 UBE2E3Q969T4 207 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 SH3KBP1Q96B97 665 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 DTD2Q96FN9 168 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 TPD52L3Q96J77 140 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 TEFMQ96QE5 360 aaKnown RBP4.53□□□□□ -1.68
CKS1B-201ENST00000308987 VPS35Q96QK1 796 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 MGLLQ99685 303 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 SLC30A2Q9BRI3 323 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 MED18Q9BUE0 208 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 DDA1Q9BW61 102 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 C6orf62Q9GZU0 229 aaPredicted RBP4.53□□□□□ -1.68
CKS1B-201ENST00000308987 SLC25A19Q9HC21 320 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 ZBTB20Q9HC78 741 aaPredicted RBP4.53□□□□□ -1.68
CKS1B-201ENST00000308987 MYNNQ9NPC7 610 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 ACER3Q9NUN7 267 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 SIDT1Q9NXL6 827 aaKnown RBP4.53□□□□□ -1.68
CKS1B-201ENST00000308987 PLEKHB1Q9UF11 243 aaPredicted RBP4.53□□□□□ -1.68
CKS1B-201ENST00000308987 MOSPD1Q9UJG1 213 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.53□□□□□ -1.68
CKS1B-201ENST00000308987 MGAT4BQ9UQ53 548 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 ANGPT4Q9Y264 503 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 SLC22A14Q9Y267 594 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 TMEM98Q9Y2Y6 226 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 TMEM184BQ9Y519 407 aaPredicted RBP4.53□□□□□ -1.68
CKS1B-201ENST00000308987 KCNE2Q9Y6J6 123 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 CACNA1CQ13936 2221 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 SLC5A10A0PJK1 596 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 A6NCN8 305 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 NPIPB15A6NHN6 443 aaPredicted RBP4.52□□□□□ -1.69
CKS1B-201ENST00000308987 HMX3A6NHT5 357 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 RHPN2P1A8MT19 583 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 A8MU76 341 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 ZNF670-ZNF695F2Z2N8 137 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 FAAHO00519 579 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 SCO2O43819 266 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 PCDH7O60245 1069 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 KIAA0513O60268 411 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 CCNKO75909 580 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 PDE9AO76083 593 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 STK17BO94768 372 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 DIRAS1O95057 198 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 GADD45GO95257 159 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 PTHP01270 115 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 IL1AP01583 271 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 IFNW1P05000 195 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 OSMP13725 252 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 ZNF24P17028 368 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 ZNF8P17098 575 aaPredicted RBP4.52□□□□□ -1.69
CKS1B-201ENST00000308987 ALOX12P18054 663 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 CD22P20273 847 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 UQCRC2P22695 453 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 GNLYP22749 145 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 XPAP23025 273 aaPredicted RBP4.52□□□□□ -1.69
CKS1B-201ENST00000308987 PSMA1P25786 263 aaKnown RBP4.52□□□□□ -1.69
CKS1B-201ENST00000308987 TNFSF8P32971 234 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 GRK5P34947 590 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 HTR3AP46098 478 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 FASLGP48023 281 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 RORCP51449 518 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 CDH12P55289 794 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 OR2B6P58173 313 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 SUMO1P63165 101 aaKnown RBP4.52□□□□□ -1.69
CKS1B-201ENST00000308987 CDK6Q00534 326 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 IFITM2Q01629 132 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 SPIBQ01892 262 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 HGFACQ04756 655 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 RUNX1T1Q06455 604 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 SCN1BQ07699 218 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 CD300CQ08708 224 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 HSPA14Q0VDF9 509 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 MLLT11Q13015 90 aaPredicted RBP4.52□□□□□ -1.69
CKS1B-201ENST00000308987 SLC13A2Q13183 592 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 ASAH1Q13510 395 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 GPR50Q13585 617 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms