RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 C12orf71A8MTZ7 269 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 H0YIV9 168 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 TACR3P29371 465 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 CEACAM7Q14002 265 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 MOB3CQ70IA8 216 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 NECAB3Q96P71 396 aaPredicted RBP9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 SLC6A7Q99884 636 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 VRK1Q99986 396 aaPredicted RBP9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 NMNAT1Q9HAN9 279 aaPredicted RBP9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 SATB2Q9UPW6 733 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 NUDT21O43809 227 aaKnown RBP9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 SLC16A7O60669 478 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 SNNO75324 88 aaPredicted RBP9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 MT-CO3P00414 261 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 SLC35E2P0CK97 266 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 CAPZBP47756 277 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 FXYD6P3P58550 94 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 SLC36A2Q495M3 483 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 AKAP14Q86UN6 197 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 C16orf58Q96GQ5 468 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 HINT2Q9BX68 163 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 ACSS1Q9NUB1 689 aaPredicted RBP9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 DUSP13Q9UII6 198 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 TNS1Q9HBL0 1735 aaKnown RBP9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 TDRD6O60522 2096 aaKnown RBP9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 SLC33A1O00400 549 aaPredicted RBP9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 CRTAPO75718 401 aaPredicted RBP9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 F13BP05160 661 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 ST6GAL1P15907 406 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 SLC19A1P41440 591 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 MTNR1AP48039 350 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 HNRNPA0Q13151 305 aaKnown RBP9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 SYPL1Q16563 259 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 EXD3Q8N9H8 876 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 INTS14Q96SY0 518 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 VN1R3Q9BXE9 311 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 PCDHGB6Q9Y5F9 930 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 CSNK1G3Q9Y6M4 447 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 SERINC4A6NH21 518 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 SNAP29O95721 258 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 GTF2F2P13984 249 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 CHRNB4P30926 498 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 PFN3P60673 137 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 CXADRP78310 365 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 RAB11BQ15907 218 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 CDNFQ49AH0 187 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 TMEM69Q5SWH9 247 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 LRRN1Q6UXK5 716 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 SMRP1Q8NCR6 262 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 COQ10AQ96MF6 247 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 OR14J1Q9UGF5 321 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 DBHP09172 617 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 EIF1P41567 113 aaKnown RBP9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 OR8B8Q15620 311 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 ZFP41Q8N8Y5 198 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 RDH12Q96NR8 316 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 CFHR5Q9BXR6 569 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 TMEM30AQ9NV96 361 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 SCP2D1Q9UJQ7 156 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 RNF6Q9Y252 685 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 RBBP6Q7Z6E9 1792 aaKnown RBP9.96□□□□□ -0.81
SYNPO2-201ENST00000307142 RASAL1O95294 804 aa9.96□□□□□ -0.81
SYNPO2-201ENST00000307142 PSPHP78330 225 aa9.96□□□□□ -0.81
SYNPO2-201ENST00000307142 MVKQ03426 396 aa9.96□□□□□ -0.81
SYNPO2-201ENST00000307142 LEXMQ3ZCV2 418 aa9.96□□□□□ -0.81
SYNPO2-201ENST00000307142 TMEM92Q6UXU6 159 aa9.96□□□□□ -0.81
SYNPO2-201ENST00000307142 MFSD8Q8NHS3 518 aa9.96□□□□□ -0.81
SYNPO2-201ENST00000307142 SGCZQ96LD1 299 aa9.96□□□□□ -0.81
SYNPO2-201ENST00000307142 PRRC1Q96M27 445 aa9.96□□□□□ -0.81
SYNPO2-201ENST00000307142 MBD2Q9UBB5 411 aa9.96□□□□□ -0.81
SYNPO2-201ENST00000307142 IGHV1OR15-9A0A0B4J2B8 117 aa9.96□□□□□ -0.81
SYNPO2-201ENST00000307142 LRIT2A6NDA9 550 aa9.96□□□□□ -0.81
SYNPO2-201ENST00000307142 SLITRK5O94991 958 aa9.96□□□□□ -0.81
SYNPO2-201ENST00000307142 IL2RAP01589 272 aa9.96□□□□□ -0.81
SYNPO2-201ENST00000307142 ELAVL1Q15717 326 aaKnown RBP9.96□□□□□ -0.81
SYNPO2-201ENST00000307142 HES3Q5TGS1 186 aa9.96□□□□□ -0.81
SYNPO2-201ENST00000307142 PGM2L1Q6PCE3 622 aa9.96□□□□□ -0.81
SYNPO2-201ENST00000307142 METTL25Q8N6Q8 603 aa9.96□□□□□ -0.81
SYNPO2-201ENST00000307142 STT3BQ8TCJ2 826 aa9.96□□□□□ -0.81
SYNPO2-201ENST00000307142 MENTQ9BUN1 341 aa9.96□□□□□ -0.81
SYNPO2-201ENST00000307142 QRSL1Q9H0R6 528 aaKnown RBP9.96□□□□□ -0.81
SYNPO2-201ENST00000307142 SEC14L4Q9UDX3 406 aa9.96□□□□□ -0.81
SYNPO2-201ENST00000307142 NDRG3Q9UGV2 375 aa9.96□□□□□ -0.81
SYNPO2-201ENST00000307142 ADAMTS7Q9UKP4 1686 aa9.96□□□□□ -0.81
SYNPO2-201ENST00000307142 M0R129 80 aa9.96□□□□□ -0.82
SYNPO2-201ENST00000307142 XPNPEP2O43895 674 aa9.96□□□□□ -0.82
SYNPO2-201ENST00000307142 PIAS2O75928 621 aa9.96□□□□□ -0.82
SYNPO2-201ENST00000307142 ZXDAP98168 799 aa9.96□□□□□ -0.82
SYNPO2-201ENST00000307142 BLMHQ13867 455 aa9.96□□□□□ -0.82
SYNPO2-201ENST00000307142 CPZQ66K79 652 aa9.96□□□□□ -0.82
SYNPO2-201ENST00000307142 ZNF367Q7RTV3 350 aa9.96□□□□□ -0.82
SYNPO2-201ENST00000307142 CPEB2Q7Z5Q1 589 aaKnown RBP9.96□□□□□ -0.82
SYNPO2-201ENST00000307142 TECPR1Q7Z6L1 1165 aa9.96□□□□□ -0.82
SYNPO2-201ENST00000307142 ZNF709Q8N972 641 aa9.96□□□□□ -0.82
SYNPO2-201ENST00000307142 DTX3Q8N9I9 347 aa9.96□□□□□ -0.82
SYNPO2-201ENST00000307142 OR8J1Q8NGP2 316 aa9.96□□□□□ -0.82
SYNPO2-201ENST00000307142 ADAMTS16Q8TE57 1224 aa9.96□□□□□ -0.82
SYNPO2-201ENST00000307142 TM4SF18Q96CE8 201 aa9.96□□□□□ -0.82
SYNPO2-201ENST00000307142 NELFAQ9H3P2 528 aa9.96□□□□□ -0.82
SYNPO2-201ENST00000307142 CLMPQ9H6B4 373 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms