RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 KRT6AP02538 564 aa10.28□□□□□ -0.76
SMIM4-201ENST00000307106 KRT6BP04259 564 aa10.28□□□□□ -0.76
SMIM4-201ENST00000307106 MSMBP08118 114 aa10.28□□□□□ -0.76
SMIM4-201ENST00000307106 GSTA2P09210 222 aa10.28□□□□□ -0.76
SMIM4-201ENST00000307106 IFI6P09912 130 aa10.28□□□□□ -0.76
SMIM4-201ENST00000307106 OR4A8P0C604 315 aa10.28□□□□□ -0.76
SMIM4-201ENST00000307106 ARAFP10398 606 aa10.28□□□□□ -0.76
SMIM4-201ENST00000307106 ACP2P11117 423 aa10.28□□□□□ -0.76
SMIM4-201ENST00000307106 DDX5P17844 614 aaKnown RBP10.28□□□□□ -0.76
SMIM4-201ENST00000307106 LCN1P31025 176 aa10.28□□□□□ -0.76
SMIM4-201ENST00000307106 NTF4P34130 210 aa10.28□□□□□ -0.76
SMIM4-201ENST00000307106 KRT6CP48668 564 aa10.28□□□□□ -0.76
SMIM4-201ENST00000307106 DIO1P49895 249 aa10.28□□□□□ -0.76
SMIM4-201ENST00000307106 RNF144AP50876 292 aaPredicted RBP10.28□□□□□ -0.76
SMIM4-201ENST00000307106 PRKAG1P54619 331 aa10.28□□□□□ -0.76
SMIM4-201ENST00000307106 PRPS1P60891 318 aa10.28□□□□□ -0.76
SMIM4-201ENST00000307106 BTKQ06187 659 aa10.28□□□□□ -0.76
SMIM4-201ENST00000307106 ZNF763Q0D2J5 394 aa10.28□□□□□ -0.76
SMIM4-201ENST00000307106 HSPB3Q12988 150 aa10.28□□□□□ -0.76
SMIM4-201ENST00000307106 PDK3Q15120 406 aa10.28□□□□□ -0.76
SMIM4-201ENST00000307106 CCNJQ5T5M9 372 aa10.28□□□□□ -0.76
SMIM4-201ENST00000307106 C3orf33Q6P1S2 294 aa10.28□□□□□ -0.76
SMIM4-201ENST00000307106 GALNT18Q6P9A2 607 aa10.28□□□□□ -0.76
SMIM4-201ENST00000307106 VHLLQ6RSH7 139 aa10.28□□□□□ -0.76
SMIM4-201ENST00000307106 IKBIPQ70UQ0 350 aa10.28□□□□□ -0.76
SMIM4-201ENST00000307106 MTERF4Q7Z6M4 381 aaKnown RBP10.28□□□□□ -0.76
SMIM4-201ENST00000307106 ZCCHC24Q8N2G6 241 aaKnown RBP10.28□□□□□ -0.76
SMIM4-201ENST00000307106 C1orf162Q8NEQ5 155 aaPredicted RBP10.28□□□□□ -0.76
SMIM4-201ENST00000307106 NUP43Q8NFH3 380 aa10.28□□□□□ -0.76
SMIM4-201ENST00000307106 ZNF483Q8TF39 744 aaPredicted RBP10.28□□□□□ -0.76
SMIM4-201ENST00000307106 UBASH3BQ8TF42 649 aa10.28□□□□□ -0.76
SMIM4-201ENST00000307106 LRRC37BQ96QE4 947 aa10.28□□□□□ -0.76
SMIM4-201ENST00000307106 KCNS3Q9BQ31 491 aa10.28□□□□□ -0.76
SMIM4-201ENST00000307106 SUCNR1Q9BXA5 334 aa10.28□□□□□ -0.76
SMIM4-201ENST00000307106 TAS2R7Q9NYW3 318 aa10.28□□□□□ -0.76
SMIM4-201ENST00000307106 SNX24Q9Y343 169 aa10.28□□□□□ -0.76
SMIM4-201ENST00000307106 ACTL7BQ9Y614 415 aa10.28□□□□□ -0.76
SMIM4-201ENST00000307106 NOTCH1P46531 2555 aa10.28□□□□□ -0.76
SMIM4-201ENST00000307106 ARHGAP32A7KAX9 2087 aa10.27□□□□□ -0.76
SMIM4-201ENST00000307106 HMX2A2RU54 273 aa10.27□□□□□ -0.77
SMIM4-201ENST00000307106 ZNF716A6NP11 495 aa10.27□□□□□ -0.77
SMIM4-201ENST00000307106 PDLIM1O00151 329 aa10.27□□□□□ -0.77
SMIM4-201ENST00000307106 EIF3HO15372 352 aaKnown RBP eCLIP10.27□□□□□ -0.77
SMIM4-201ENST00000307106 MRPL33O75394 65 aaKnown RBP10.27□□□□□ -0.77
SMIM4-201ENST00000307106 HKR1P10072 659 aa10.27□□□□□ -0.77
SMIM4-201ENST00000307106 TYK2P29597 1187 aa10.27□□□□□ -0.77
SMIM4-201ENST00000307106 GPC1P35052 558 aa10.27□□□□□ -0.77
SMIM4-201ENST00000307106 SERPINB4P48594 390 aa10.27□□□□□ -0.77
SMIM4-201ENST00000307106 KHKP50053 298 aa10.27□□□□□ -0.77
SMIM4-201ENST00000307106 DUSP5Q16690 384 aa10.27□□□□□ -0.77
SMIM4-201ENST00000307106 SLC25A53Q5H9E4 307 aa10.27□□□□□ -0.77
SMIM4-201ENST00000307106 C1QTNF12Q5T7M4 302 aa10.27□□□□□ -0.77
SMIM4-201ENST00000307106 FAHD2BQ6P2I3 314 aaPredicted RBP10.27□□□□□ -0.77
SMIM4-201ENST00000307106 KLHL24Q6TFL4 600 aa10.27□□□□□ -0.77
SMIM4-201ENST00000307106 ZNF551Q7Z340 670 aaPredicted RBP10.27□□□□□ -0.77
SMIM4-201ENST00000307106 SZRD1Q7Z422 152 aa10.27□□□□□ -0.77
SMIM4-201ENST00000307106 ZDHHC22Q8N966 263 aa10.27□□□□□ -0.77
SMIM4-201ENST00000307106 SLC16A11Q8NCK7 471 aa10.27□□□□□ -0.77
SMIM4-201ENST00000307106 CEP70Q8NHQ1 597 aa10.27□□□□□ -0.77
SMIM4-201ENST00000307106 GPR119Q8TDV5 335 aa10.27□□□□□ -0.77
SMIM4-201ENST00000307106 ARL8AQ96BM9 186 aa10.27□□□□□ -0.77
SMIM4-201ENST00000307106 ZNF524Q96C55 264 aa10.27□□□□□ -0.77
SMIM4-201ENST00000307106 OTUB1Q96FW1 271 aaPredicted RBP10.27□□□□□ -0.77
SMIM4-201ENST00000307106 FAHD2AQ96GK7 314 aa10.27□□□□□ -0.77
SMIM4-201ENST00000307106 VPS11Q9H270 941 aa10.27□□□□□ -0.77
SMIM4-201ENST00000307106 CDC42EP4Q9H3Q1 356 aaKnown RBP10.27□□□□□ -0.77
SMIM4-201ENST00000307106 ESM1Q9NQ30 184 aa10.27□□□□□ -0.77
SMIM4-201ENST00000307106 DCTN4Q9UJW0 460 aa10.27□□□□□ -0.77
SMIM4-201ENST00000307106 FBXO9Q9UK97 447 aaPredicted RBP10.27□□□□□ -0.77
SMIM4-201ENST00000307106 SNX12Q9UMY4 172 aa10.27□□□□□ -0.77
SMIM4-201ENST00000307106 PPP2R2CQ9Y2T4 447 aa10.27□□□□□ -0.77
SMIM4-201ENST00000307106 LOC105371242A0A075B767 164 aa10.26□□□□□ -0.77
SMIM4-201ENST00000307106 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.26□□□□□ -0.77
SMIM4-201ENST00000307106 IGHV1-18A0A0C4DH31 117 aa10.26□□□□□ -0.77
SMIM4-201ENST00000307106 LYNX1G3V0Z9 82 aa10.26□□□□□ -0.77
SMIM4-201ENST00000307106 SULT2B1O00204 365 aa10.26□□□□□ -0.77
SMIM4-201ENST00000307106 GPR171O14626 319 aa10.26□□□□□ -0.77
SMIM4-201ENST00000307106 ULK1O75385 1050 aa10.26□□□□□ -0.77
SMIM4-201ENST00000307106 WNT11O96014 354 aa10.26□□□□□ -0.77
SMIM4-201ENST00000307106 PNPP00491 289 aa10.26□□□□□ -0.77
SMIM4-201ENST00000307106 CRYAAP02489 173 aa10.26□□□□□ -0.77
SMIM4-201ENST00000307106 RBP1P09455 135 aa10.26□□□□□ -0.77
SMIM4-201ENST00000307106 LYNX1P0DP58 116 aa10.26□□□□□ -0.77
SMIM4-201ENST00000307106 HMOX2P30519 316 aa10.26□□□□□ -0.77
SMIM4-201ENST00000307106 STX2P32856 288 aa10.26□□□□□ -0.77
SMIM4-201ENST00000307106 SLC1A3P43003 542 aa10.26□□□□□ -0.77
SMIM4-201ENST00000307106 HTR6P50406 440 aa10.26□□□□□ -0.77
SMIM4-201ENST00000307106 UBA52P62987 128 aaKnown RBP10.26□□□□□ -0.77
SMIM4-201ENST00000307106 CSNK2A1P68400 391 aaPredicted RBP10.26□□□□□ -0.77
SMIM4-201ENST00000307106 TGFBR3Q03167 851 aa10.26□□□□□ -0.77
SMIM4-201ENST00000307106 NAB1Q13506 487 aa10.26□□□□□ -0.77
SMIM4-201ENST00000307106 QPRTQ15274 297 aa10.26□□□□□ -0.77
SMIM4-201ENST00000307106 NDUFAF6Q330K2 333 aa10.26□□□□□ -0.77
SMIM4-201ENST00000307106 FAM71E1Q6IPT2 247 aa10.26□□□□□ -0.77
SMIM4-201ENST00000307106 C1orf229Q6ZS94 237 aaPredicted RBP10.26□□□□□ -0.77
SMIM4-201ENST00000307106 TMPPEQ6ZT21 453 aa10.26□□□□□ -0.77
SMIM4-201ENST00000307106 MTDHQ86UE4 582 aaKnown RBP10.26□□□□□ -0.77
SMIM4-201ENST00000307106 TEX29Q8N6K0 151 aa10.26□□□□□ -0.77
SMIM4-201ENST00000307106 COX18Q8N8Q8 333 aa10.26□□□□□ -0.77
SMIM4-201ENST00000307106 ZNF527Q8NB42 609 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms