RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 IKZF1Q13422 519 aa7.28□□□□□ -1.24
SCN9A-201ENST00000303354 GTF2H4Q92759 462 aa7.28□□□□□ -1.24
SCN9A-201ENST00000303354 TANKQ92844 425 aa7.28□□□□□ -1.24
SCN9A-201ENST00000303354 PLPPR2Q96GM1 343 aa7.28□□□□□ -1.24
SCN9A-201ENST00000303354 ACPTQ9BZG2 426 aa7.28□□□□□ -1.24
SCN9A-201ENST00000303354 MLXQ9UH92 298 aa7.28□□□□□ -1.24
SCN9A-201ENST00000303354 PTGER4P35408 488 aa7.28□□□□□ -1.24
SCN9A-201ENST00000303354 CLDN6P56747 220 aa7.28□□□□□ -1.24
SCN9A-201ENST00000303354 C6orf141Q5SZD1 244 aa7.28□□□□□ -1.24
SCN9A-201ENST00000303354 ATG9BQ674R7 924 aa7.28□□□□□ -1.24
SCN9A-201ENST00000303354 TLDC1Q6P9B6 456 aa7.28□□□□□ -1.24
SCN9A-201ENST00000303354 RSPRY1Q96DX4 576 aa7.28□□□□□ -1.24
SCN9A-201ENST00000303354 ASB16Q96NS5 453 aa7.28□□□□□ -1.24
SCN9A-201ENST00000303354 HRASLSQ9HDD0 168 aa7.28□□□□□ -1.24
SCN9A-201ENST00000303354 TBC1D29Q9UFV1 150 aa7.28□□□□□ -1.24
SCN9A-201ENST00000303354 PCDHGA10Q9Y5H3 936 aa7.28□□□□□ -1.24
SCN9A-201ENST00000303354 A0A087WUU8 490 aa7.28□□□□□ -1.24
SCN9A-201ENST00000303354 PAHP00439 452 aa7.28□□□□□ -1.24
SCN9A-201ENST00000303354 RHCEP18577 417 aa7.28□□□□□ -1.24
SCN9A-201ENST00000303354 HCCSP53701 268 aa7.28□□□□□ -1.24
SCN9A-201ENST00000303354 CLDN12P56749 244 aa7.28□□□□□ -1.24
SCN9A-201ENST00000303354 PPP2CBP62714 309 aa7.28□□□□□ -1.24
SCN9A-201ENST00000303354 PPP2CAP67775 309 aa7.28□□□□□ -1.24
SCN9A-201ENST00000303354 MRPL2Q5T653 305 aaKnown RBP7.28□□□□□ -1.24
SCN9A-201ENST00000303354 OPN5Q6U736 354 aa7.28□□□□□ -1.24
SCN9A-201ENST00000303354 MED25Q71SY5 747 aa7.28□□□□□ -1.24
SCN9A-201ENST00000303354 OPA3Q9H6K4 179 aa7.28□□□□□ -1.24
SCN9A-201ENST00000303354 SSU72Q9NP77 194 aaKnown RBP7.28□□□□□ -1.24
SCN9A-201ENST00000303354 TRIM64CA6NLI5 447 aa7.28□□□□□ -1.24
SCN9A-201ENST00000303354 SERPINA7P05543 415 aa7.28□□□□□ -1.24
SCN9A-201ENST00000303354 NUDT7P0C024 238 aa7.28□□□□□ -1.24
SCN9A-201ENST00000303354 RAB3AP20336 220 aa7.28□□□□□ -1.24
SCN9A-201ENST00000303354 BTG2P78543 158 aa7.28□□□□□ -1.24
SCN9A-201ENST00000303354 HEPHL1Q6MZM0 1159 aa7.28□□□□□ -1.24
SCN9A-201ENST00000303354 ZNF517Q6ZMY9 492 aaPredicted RBP7.28□□□□□ -1.24
SCN9A-201ENST00000303354 TCEAL2Q9H3H9 227 aaPredicted RBP7.28□□□□□ -1.24
SCN9A-201ENST00000303354 PRRG2O14669 202 aa7.27□□□□□ -1.24
SCN9A-201ENST00000303354 CASC3O15234 703 aaKnown RBP7.27□□□□□ -1.24
SCN9A-201ENST00000303354 CSO75390 466 aaKnown RBP7.27□□□□□ -1.24
SCN9A-201ENST00000303354 DNAJB1P25685 340 aa7.27□□□□□ -1.24
SCN9A-201ENST00000303354 PCGF3Q3KNV8 242 aa7.27□□□□□ -1.24
SCN9A-201ENST00000303354 C14orf28Q4W4Y0 310 aa7.27□□□□□ -1.24
SCN9A-201ENST00000303354 FAM109BQ6ICB4 259 aaPredicted RBP7.27□□□□□ -1.24
SCN9A-201ENST00000303354 OVCH1Q7RTY7 1134 aa7.27□□□□□ -1.24
SCN9A-201ENST00000303354 ERMP1Q7Z2K6 904 aa7.27□□□□□ -1.24
SCN9A-201ENST00000303354 C3orf30Q96M34 536 aa7.27□□□□□ -1.24
SCN9A-201ENST00000303354 WSB2Q9NYS7 404 aaPredicted RBP7.27□□□□□ -1.24
SCN9A-201ENST00000303354 SRPK3Q9UPE1 567 aa7.27□□□□□ -1.24
SCN9A-201ENST00000303354 ENTPD2Q9Y5L3 495 aa7.27□□□□□ -1.24
SCN9A-201ENST00000303354 PRLP01236 227 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 RAB3BP20337 219 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 RPS3P23396 243 aaKnown RBP eCLIP7.27□□□□□ -1.25
SCN9A-201ENST00000303354 FAM219BQ5XKK7 198 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 CPXM2Q8N436 756 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 CDX2Q99626 313 aaPredicted RBP7.27□□□□□ -1.25
SCN9A-201ENST00000303354 SYT4Q9H2B2 425 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 ELOVL3Q9HB03 270 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 MBLAC1A4D2B0 266 aaPredicted RBP7.27□□□□□ -1.25
SCN9A-201ENST00000303354 ZNF593O00488 134 aaPredicted RBP7.27□□□□□ -1.25
SCN9A-201ENST00000303354 UCHL1P09936 223 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 SDC1P18827 310 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 POU3F3P20264 500 aaPredicted RBP7.27□□□□□ -1.25
SCN9A-201ENST00000303354 IL2RGP31785 369 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 ADPRHP54922 357 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 RRADP55042 308 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 OR2B11Q5JQS5 317 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 TMEM71Q6P5X7 295 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 TIFABQ6ZNK6 161 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 SYNPRQ8TBG9 265 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 ZBTB42B2RXF5 422 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 F5H0A9 414 aaPredicted RBP7.27□□□□□ -1.25
SCN9A-201ENST00000303354 MT-ND2P03891 347 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 ETV4P43268 484 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 CYB561P49447 251 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 ZNF440Q8IYI8 595 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 CDRT4Q8N9R6 151 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 TXNDC15Q96J42 360 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 ZC3H10Q96K80 434 aaKnown RBP7.27□□□□□ -1.25
SCN9A-201ENST00000303354 MED18Q9BUE0 208 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 VRTNQ9H8Y1 702 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 CRLF2Q9HC73 371 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 GMPR2Q9P2T1 348 aaKnown RBP7.27□□□□□ -1.25
SCN9A-201ENST00000303354 PCDHA9Q9Y5H5 950 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 SULT1B1O43704 296 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 GSTP1P09211 210 aaKnown RBP7.27□□□□□ -1.25
SCN9A-201ENST00000303354 F8A1P23610 371 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 PLA2G7Q13093 441 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 SSX2Q16385 188 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 LACTB2Q53H82 288 aaPredicted RBP7.27□□□□□ -1.25
SCN9A-201ENST00000303354 LRRN1Q6UXK5 716 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 OR5K2Q8NHB8 316 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 ABHD4Q8TB40 342 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 ADAMTS18Q8TE60 1221 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 FCGR1BQ92637 280 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 ALG8Q9BVK2 526 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 SLC23A2Q9UGH3 650 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 NDUFB2O95178 105 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 LPLP06858 475 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 RAB4AP20338 218 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 SOX18P35713 384 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms