RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 GIMD1P0DJR0 217 aa12.39□□□□□ -0.43
CASC4-201ENST00000299957 ZNF823P16415 610 aa12.39□□□□□ -0.43
CASC4-201ENST00000299957 PRKCAP17252 672 aa12.39□□□□□ -0.43
CASC4-201ENST00000299957 TM4SF4P48230 202 aa12.39□□□□□ -0.43
CASC4-201ENST00000299957 VEGFCP49767 419 aa12.39□□□□□ -0.43
CASC4-201ENST00000299957 SRSF5Q13243 272 aaKnown RBP12.39□□□□□ -0.43
CASC4-201ENST00000299957 TMEM35AQ53FP2 167 aa12.39□□□□□ -0.43
CASC4-201ENST00000299957 DCST2Q5T1A1 773 aa12.39□□□□□ -0.43
CASC4-201ENST00000299957 BTN2A1Q7KYR7 527 aa12.39□□□□□ -0.43
CASC4-201ENST00000299957 ZNF527Q8NB42 609 aa12.39□□□□□ -0.43
CASC4-201ENST00000299957 OR52R1Q8NGF1 315 aa12.39□□□□□ -0.43
CASC4-201ENST00000299957 CNOT9Q92600 299 aaKnown RBP12.39□□□□□ -0.43
CASC4-201ENST00000299957 SNX18Q96RF0 628 aa12.39□□□□□ -0.43
CASC4-201ENST00000299957 DPYSL5Q9BPU6 564 aa12.39□□□□□ -0.43
CASC4-201ENST00000299957 TPSD1Q9BZJ3 242 aa12.39□□□□□ -0.43
CASC4-201ENST00000299957 TMEM185BQ9H7F4 350 aa12.39□□□□□ -0.43
CASC4-201ENST00000299957 CLDND1Q9NY35 253 aa12.39□□□□□ -0.43
CASC4-201ENST00000299957 ZNF443Q9Y2A4 671 aaPredicted RBP12.39□□□□□ -0.43
CASC4-201ENST00000299957 CENPBD1B2RD01 187 aa12.39□□□□□ -0.43
CASC4-201ENST00000299957 DGCR2P98153 550 aa12.39□□□□□ -0.43
CASC4-201ENST00000299957 CHAF1BQ13112 559 aa12.39□□□□□ -0.43
CASC4-201ENST00000299957 GPR176Q14439 515 aa12.39□□□□□ -0.43
CASC4-201ENST00000299957 C1orf189Q5VU69 101 aa12.39□□□□□ -0.43
CASC4-201ENST00000299957 SFXN4Q6P4A7 337 aa12.39□□□□□ -0.43
CASC4-201ENST00000299957 APOOLQ6UXV4 268 aa12.39□□□□□ -0.43
CASC4-201ENST00000299957 CCDC190Q86UF4 302 aa12.39□□□□□ -0.43
CASC4-201ENST00000299957 ADGRF3Q8IZF5 1079 aa12.39□□□□□ -0.43
CASC4-201ENST00000299957 RDH10Q8IZV5 341 aa12.39□□□□□ -0.43
CASC4-201ENST00000299957 LGALS14Q8TCE9 139 aa12.39□□□□□ -0.43
CASC4-201ENST00000299957 SGTBQ96EQ0 304 aa12.39□□□□□ -0.43
CASC4-201ENST00000299957 CNN2Q99439 309 aaKnown RBP12.39□□□□□ -0.43
CASC4-201ENST00000299957 GTPBP2Q9BX10 602 aaKnown RBP12.39□□□□□ -0.43
CASC4-201ENST00000299957 PRSS16Q9NQE7 514 aa12.39□□□□□ -0.43
CASC4-201ENST00000299957 GSKIPQ9P0R6 139 aa12.39□□□□□ -0.43
CASC4-201ENST00000299957 CYP8B1Q9UNU6 501 aa12.39□□□□□ -0.43
CASC4-201ENST00000299957 TMEM72A0PK05 275 aa12.38□□□□□ -0.43
CASC4-201ENST00000299957 SCDO00767 359 aa12.38□□□□□ -0.43
CASC4-201ENST00000299957 PGAM2P15259 253 aa12.38□□□□□ -0.43
CASC4-201ENST00000299957 GZMMP51124 257 aa12.38□□□□□ -0.43
CASC4-201ENST00000299957 METAP1DQ6UB28 335 aaPredicted RBP12.38□□□□□ -0.43
CASC4-201ENST00000299957 MEPCEQ7L2J0 689 aaKnown RBP12.38□□□□□ -0.43
CASC4-201ENST00000299957 OR2L3Q8NG85 312 aa12.38□□□□□ -0.43
CASC4-201ENST00000299957 TGM7Q96PF1 710 aa12.38□□□□□ -0.43
CASC4-201ENST00000299957 MS4A4EQ96PG1 132 aa12.38□□□□□ -0.43
CASC4-201ENST00000299957 SLC6A7Q99884 636 aa12.38□□□□□ -0.43
CASC4-201ENST00000299957 SLC6A15Q9H2J7 730 aa12.38□□□□□ -0.43
CASC4-201ENST00000299957 FGF22Q9HCT0 170 aa12.38□□□□□ -0.43
CASC4-201ENST00000299957 UBQLN2Q9UHD9 624 aa12.38□□□□□ -0.43
CASC4-201ENST00000299957 ING1Q9UK53 422 aaPredicted RBP12.38□□□□□ -0.43
CASC4-201ENST00000299957 RENP00797 406 aa12.38□□□□□ -0.43
CASC4-201ENST00000299957 BSGP35613 385 aa12.38□□□□□ -0.43
CASC4-201ENST00000299957 VEGFBP49765 207 aa12.38□□□□□ -0.43
CASC4-201ENST00000299957 E2F1Q01094 437 aa12.38□□□□□ -0.43
CASC4-201ENST00000299957 BTN1A1Q13410 526 aa12.38□□□□□ -0.43
CASC4-201ENST00000299957 PCGF3Q3KNV8 242 aa12.38□□□□□ -0.43
CASC4-201ENST00000299957 ABHD17CQ6PCB6 329 aa12.38□□□□□ -0.43
CASC4-201ENST00000299957 GPALPP1Q8IXQ4 340 aa12.38□□□□□ -0.43
CASC4-201ENST00000299957 ABHD4Q8TB40 342 aa12.38□□□□□ -0.43
CASC4-201ENST00000299957 BCL2L14Q9BZR8 327 aa12.38□□□□□ -0.43
CASC4-201ENST00000299957 MED11Q9P086 117 aa12.38□□□□□ -0.43
CASC4-201ENST00000299957 ERVK-19Q9WJR5 959 aa12.38□□□□□ -0.43
CASC4-201ENST00000299957 PCDHGB7Q9Y5F8 929 aa12.38□□□□□ -0.43
CASC4-201ENST00000299957 A0A1B0GV50 99 aa12.38□□□□□ -0.43
CASC4-201ENST00000299957 OR7A10O76100 309 aa12.38□□□□□ -0.43
CASC4-201ENST00000299957 ECDO95905 644 aaPredicted RBP12.38□□□□□ -0.43
CASC4-201ENST00000299957 EPHA5P54756 1037 aa12.38□□□□□ -0.43
CASC4-201ENST00000299957 ZNF33BQ06732 778 aa12.38□□□□□ -0.43
CASC4-201ENST00000299957 GPAT4Q86UL3 456 aa12.38□□□□□ -0.43
CASC4-201ENST00000299957 SIMC1Q8NDZ2 872 aa12.38□□□□□ -0.43
CASC4-201ENST00000299957 DVL3Q92997 716 aaPredicted RBP12.38□□□□□ -0.43
CASC4-201ENST00000299957 SLC35A4Q96G79 324 aa12.38□□□□□ -0.43
CASC4-201ENST00000299957 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.38□□□□□ -0.43
CASC4-201ENST00000299957 ARID2Q68CP9 1835 aa12.38□□□□□ -0.43
CASC4-201ENST00000299957 OR2AT4A6NND4 320 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 H3BQ06 376 aaPredicted RBP12.37□□□□□ -0.43
CASC4-201ENST00000299957 RFPL3O75679 317 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 AGR2O95994 175 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 TACSTD2P09758 323 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 ARFRP1Q13795 201 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 ITPRIPL2Q3MIP1 535 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 C3orf38Q5JPI3 329 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 ZNF362Q5T0B9 420 aaPredicted RBP12.37□□□□□ -0.43
CASC4-201ENST00000299957 PXDC1Q5TGL8 231 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 ZNF547Q8IVP9 402 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 KDM8Q8N371 416 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 OR7G2Q8NG99 324 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 FAM174AQ8TBP5 190 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 GPA33Q99795 319 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 APOOQ9BUR5 198 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 C1QTNF2Q9BXJ5 285 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 PELI2Q9HAT8 420 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 ANK1P16157 1881 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 EP300Q09472 2414 aaPredicted RBP12.37□□□□□ -0.43
CASC4-201ENST00000299957 EEF1E1-BLOC1S5C9J1V9 151 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 KRT33AO76009 404 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 LGI1O95970 557 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 HLA-DMAP28067 261 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 GJA4P35212 333 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 CRYBB2P43320 205 aa12.37□□□□□ -0.43
CASC4-201ENST00000299957 SLC25A35Q3KQZ1 300 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms