RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 EXOSC1Q9Y3B2 195 aaKnown RBP8.41□□□□□ -1.06
PDPN-201ENST00000294489 PCDHGA3Q9Y5H0 932 aa8.41□□□□□ -1.06
PDPN-201ENST00000294489 KHNYNO15037 678 aaKnown RBP8.4□□□□□ -1.06
PDPN-201ENST00000294489 HCN1O60741 890 aa8.4□□□□□ -1.06
PDPN-201ENST00000294489 TGFBR1P36897 503 aa8.4□□□□□ -1.06
PDPN-201ENST00000294489 DCAF7P61962 342 aa8.4□□□□□ -1.06
PDPN-201ENST00000294489 PSPHP78330 225 aa8.4□□□□□ -1.06
PDPN-201ENST00000294489 MLLT11Q13015 90 aaPredicted RBP8.4□□□□□ -1.06
PDPN-201ENST00000294489 VWA2Q5GFL6 755 aa8.4□□□□□ -1.06
PDPN-201ENST00000294489 AADACL4Q5VUY2 407 aa8.4□□□□□ -1.06
PDPN-201ENST00000294489 NXNL2Q5VZ03 156 aa8.4□□□□□ -1.06
PDPN-201ENST00000294489 C19orf48Q6RUI8 117 aa8.4□□□□□ -1.06
PDPN-201ENST00000294489 OVCH1Q7RTY7 1134 aa8.4□□□□□ -1.06
PDPN-201ENST00000294489 TMCO5AQ8N6Q1 288 aa8.4□□□□□ -1.06
PDPN-201ENST00000294489 ZNF321PQ8N8H1 164 aa8.4□□□□□ -1.06
PDPN-201ENST00000294489 FAM71CQ8NEG0 241 aa8.4□□□□□ -1.06
PDPN-201ENST00000294489 OR4C3Q8NH37 302 aa8.4□□□□□ -1.06
PDPN-201ENST00000294489 DAZLQ92904 295 aaKnown RBP8.4□□□□□ -1.06
PDPN-201ENST00000294489 ART5Q96L15 291 aa8.4□□□□□ -1.06
PDPN-201ENST00000294489 TAPBPLQ9BX59 468 aa8.4□□□□□ -1.06
PDPN-201ENST00000294489 SEMA4CQ9C0C4 833 aa8.4□□□□□ -1.06
PDPN-201ENST00000294489 SLIRPQ9GZT3 109 aaKnown RBP8.4□□□□□ -1.06
PDPN-201ENST00000294489 UBQLN4Q9NRR5 601 aa8.4□□□□□ -1.06
PDPN-201ENST00000294489 FAM86C2PA6NEL3 165 aa8.4□□□□□ -1.06
PDPN-201ENST00000294489 FLRT2O43155 660 aa8.4□□□□□ -1.06
PDPN-201ENST00000294489 GALR2O43603 387 aaPredicted RBP8.4□□□□□ -1.06
PDPN-201ENST00000294489 SCRG1O75711 98 aa8.4□□□□□ -1.06
PDPN-201ENST00000294489 IL33O95760 270 aa8.4□□□□□ -1.06
PDPN-201ENST00000294489 GRK5P34947 590 aa8.4□□□□□ -1.06
PDPN-201ENST00000294489 ATP6V1E1P36543 226 aa8.4□□□□□ -1.06
PDPN-201ENST00000294489 MC2RQ01718 297 aa8.4□□□□□ -1.06
PDPN-201ENST00000294489 NSDHLQ15738 373 aa8.4□□□□□ -1.06
PDPN-201ENST00000294489 KLHL26Q53HC5 615 aa8.4□□□□□ -1.06
PDPN-201ENST00000294489 SMARCD3Q6STE5 483 aa8.4□□□□□ -1.06
PDPN-201ENST00000294489 GDPGP1Q6ZNW5 385 aa8.4□□□□□ -1.06
PDPN-201ENST00000294489 LAPTM4BQ86VI4 370 aa8.4□□□□□ -1.06
PDPN-201ENST00000294489 GID4Q8IVV7 300 aa8.4□□□□□ -1.06
PDPN-201ENST00000294489 MCFD2Q8NI22 146 aa8.4□□□□□ -1.06
PDPN-201ENST00000294489 DNAJA4Q8WW22 397 aaPredicted RBP8.4□□□□□ -1.06
PDPN-201ENST00000294489 EFHD2Q96C19 240 aaPredicted RBP8.4□□□□□ -1.06
PDPN-201ENST00000294489 LRFN5Q96NI6 719 aa8.4□□□□□ -1.06
PDPN-201ENST00000294489 FN3KQ9H479 309 aa8.4□□□□□ -1.06
PDPN-201ENST00000294489 FBXO8Q9NRD0 319 aa8.4□□□□□ -1.06
PDPN-201ENST00000294489 CTSFQ9UBX1 484 aa8.4□□□□□ -1.06
PDPN-201ENST00000294489 CABIN1Q9Y6J0 2220 aa8.4□□□□□ -1.06
PDPN-201ENST00000294489 SCDO00767 359 aa8.4□□□□□ -1.07
PDPN-201ENST00000294489 LDOC1O95751 146 aaPredicted RBP8.4□□□□□ -1.07
PDPN-201ENST00000294489 ZGLP1P0C6A0 271 aa8.4□□□□□ -1.07
PDPN-201ENST00000294489 NAT1P18440 290 aa8.4□□□□□ -1.07
PDPN-201ENST00000294489 HTR1FP30939 366 aa8.4□□□□□ -1.07
PDPN-201ENST00000294489 ETV5P41161 510 aa8.4□□□□□ -1.07
PDPN-201ENST00000294489 ETV1P50549 477 aa8.4□□□□□ -1.07
PDPN-201ENST00000294489 WNT4P56705 351 aa8.4□□□□□ -1.07
PDPN-201ENST00000294489 DCDP81605 110 aaKnown RBP8.4□□□□□ -1.07
PDPN-201ENST00000294489 DAB2P98082 770 aa8.4□□□□□ -1.07
PDPN-201ENST00000294489 ZNF404Q494X3 552 aa8.4□□□□□ -1.07
PDPN-201ENST00000294489 NKAIN1Q4KMZ8 207 aa8.4□□□□□ -1.07
PDPN-201ENST00000294489 C1orf189Q5VU69 101 aa8.4□□□□□ -1.07
PDPN-201ENST00000294489 CXXC5Q7LFL8 322 aaKnown RBP8.4□□□□□ -1.07
PDPN-201ENST00000294489 OAFQ86UD1 273 aa8.4□□□□□ -1.07
PDPN-201ENST00000294489 ATCAYQ86WG3 371 aa8.4□□□□□ -1.07
PDPN-201ENST00000294489 NFAM1Q8NET5 270 aaPredicted RBP8.4□□□□□ -1.07
PDPN-201ENST00000294489 OR1N1Q8NGS0 311 aa8.4□□□□□ -1.07
PDPN-201ENST00000294489 OTULINQ96BN8 352 aa8.4□□□□□ -1.07
PDPN-201ENST00000294489 ARSGQ96EG1 525 aa8.4□□□□□ -1.07
PDPN-201ENST00000294489 LCORQ96JN0 433 aaPredicted RBP8.4□□□□□ -1.07
PDPN-201ENST00000294489 CENPOQ9BU64 300 aa8.4□□□□□ -1.07
PDPN-201ENST00000294489 ZNF426Q9BUY5 554 aa8.4□□□□□ -1.07
PDPN-201ENST00000294489 IFT27Q9BW83 186 aa8.4□□□□□ -1.07
PDPN-201ENST00000294489 NUDT9Q9BW91 350 aa8.4□□□□□ -1.07
PDPN-201ENST00000294489 GTPBP2Q9BX10 602 aaKnown RBP8.4□□□□□ -1.07
PDPN-201ENST00000294489 MMP27Q9H306 513 aa8.4□□□□□ -1.07
PDPN-201ENST00000294489 MEPEQ9NQ76 525 aaPredicted RBP8.4□□□□□ -1.07
PDPN-201ENST00000294489 OCIAD1Q9NX40 245 aa8.4□□□□□ -1.07
PDPN-201ENST00000294489 SEC14L4Q9UDX3 406 aa8.4□□□□□ -1.07
PDPN-201ENST00000294489 SIGLEC7Q9Y286 467 aa8.4□□□□□ -1.07
PDPN-201ENST00000294489 TMEM129A0AVI4 362 aa8.39□□□□□ -1.07
PDPN-201ENST00000294489 BHLHE40O14503 412 aa8.39□□□□□ -1.07
PDPN-201ENST00000294489 ADAM11O75078 769 aa8.39□□□□□ -1.07
PDPN-201ENST00000294489 PAICSP22234 425 aaKnown RBP8.39□□□□□ -1.07
PDPN-201ENST00000294489 CCKBRP32239 447 aa8.39□□□□□ -1.07
PDPN-201ENST00000294489 SOX3P41225 446 aa8.39□□□□□ -1.07
PDPN-201ENST00000294489 SSX1Q16384 188 aa8.39□□□□□ -1.07
PDPN-201ENST00000294489 HLA-DQA1Q5Y7H0 255 aa8.39□□□□□ -1.07
PDPN-201ENST00000294489 MRPL14Q6P1L8 145 aaKnown RBP8.39□□□□□ -1.07
PDPN-201ENST00000294489 PAQR6Q6TCH4 344 aa8.39□□□□□ -1.07
PDPN-201ENST00000294489 LINC00114Q6XXX2 140 aa8.39□□□□□ -1.07
PDPN-201ENST00000294489 CPOQ8IVL8 374 aa8.39□□□□□ -1.07
PDPN-201ENST00000294489 SLC43A2Q8N370 569 aa8.39□□□□□ -1.07
PDPN-201ENST00000294489 LNX2Q8N448 690 aa8.39□□□□□ -1.07
PDPN-201ENST00000294489 OR6Q1Q8NGQ2 317 aa8.39□□□□□ -1.07
PDPN-201ENST00000294489 OR13C2Q8NGS9 318 aa8.39□□□□□ -1.07
PDPN-201ENST00000294489 STT3BQ8TCJ2 826 aa8.39□□□□□ -1.07
PDPN-201ENST00000294489 SMOC1Q9H4F8 434 aa8.39□□□□□ -1.07
PDPN-201ENST00000294489 EXOSC4Q9NPD3 245 aaKnown RBP8.39□□□□□ -1.07
PDPN-201ENST00000294489 COPS7AQ9UBW8 275 aa8.39□□□□□ -1.07
PDPN-201ENST00000294489 BAIAP2Q9UQB8 552 aa8.39□□□□□ -1.07
PDPN-201ENST00000294489 A3GALT2U3KPV4 340 aa8.39□□□□□ -1.07
PDPN-201ENST00000294489 PMF1-BGLAPU3KQ54 211 aa8.39□□□□□ -1.07
PDPN-201ENST00000294489 MUC3AQ02505 3323 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms