RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 H6PDO95479 791 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 NADKO95544 446 aaPredicted RBP7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 F8A1P23610 371 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 TMED10P49755 219 aaKnown RBP7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 ZNF41P51814 821 aaPredicted RBP7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 AIMP2Q13155 320 aaKnown RBP7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 KRR1Q13601 381 aaKnown RBP7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 KPNB1Q14974 876 aaKnown RBP7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 PDSS1Q5T2R2 415 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 PIWIL3Q7Z3Z3 882 aaKnown RBP7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 C19orf18Q8NEA5 215 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 OR14L1PQ8NHC6 308 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 WDR60Q8WVS4 1066 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 FGF11Q92914 225 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 TREX2Q9BQ50 279 aaPredicted RBP7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 PCDHAC1Q9H158 963 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 HPF1Q9NWY4 346 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 ZNF292O60281 2723 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 LAMA1P25391 3075 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 ISPDA4D126 451 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 TRABD2BA6NFA1 517 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 OR6C70A6NIJ9 312 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 EEF1E1-BLOC1S5C9J1V9 151 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 NPIPB9F8W1W9 429 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 EEF1E1O43324 174 aaKnown RBP7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 TBX1O43435 398 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 TSPAN2O60636 221 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 GCM2O75603 506 aaPredicted RBP7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 SORBS2O94875 1100 aaKnown RBP7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 IFNW1P05000 195 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 MNDAP41218 407 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 SELENOWP63302 87 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 MAPK14Q16539 360 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 OR5M10Q6IEU7 315 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 OAFQ86UD1 273 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 ZNF527Q8NB42 609 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 DOHHQ9BU89 302 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 CCM2LQ9NUG4 571 aaPredicted RBP7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 P4HTMQ9NXG6 502 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 CH25HO95992 272 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 ADRB1P08588 477 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 ITGA2P17301 1181 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 TBXA2RP21731 343 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 PTGER1P34995 402 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 MAGEA2P43356 314 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 CDH12P55289 794 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 DEFA1P59665 94 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 DEFA3P59666 94 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 VHLLQ6RSH7 139 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 GRAMD2AQ8IUY3 354 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 MISPQ8IVT2 679 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 SLC5A8Q8N695 610 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 TMEM102Q8N9M5 508 aaPredicted RBP7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 TSPAN14Q8NG11 270 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 KCNE4Q8WWG9 221 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 MAL2Q969L2 176 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 C1GALT1C1Q96EU7 318 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 PYURFQ96I23 114 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 EXOSC3Q9NQT5 275 aaKnown RBP7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 ANKRD10Q9NXR5 420 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 TMEM200CA6NKL6 621 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 PPM1BO75688 479 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 FBXO45P0C2W1 286 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 RAP2AP10114 183 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 MLF1P58340 268 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 GANABQ14697 944 aaKnown RBP7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 SYPL1Q16563 259 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 CYBRD1Q53TN4 286 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 FAM156AQ8NDB6 213 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 SIMC1Q8NDZ2 872 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 DNAAF1Q8NEP3 725 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 TOR1AIP2Q8NFQ8 470 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 GEMIN6Q8WXD5 167 aaKnown RBP7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 TTC9Q92623 222 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 TAMM41Q96BW9 452 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 ARHGDIGQ99819 225 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 MFRPQ9BY79 579 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 ANKRA2Q9H9E1 313 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 USP22Q9UPT9 525 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 ZNF443Q9Y2A4 671 aaPredicted RBP7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 KCNE3Q9Y6H6 103 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 DHRS12A0PJE2 317 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 AGAP5A6NIR3 686 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 RIIAD1A6NNX1 92 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 NME6O75414 186 aaPredicted RBP7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 RPP14O95059 124 aaKnown RBP7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 SERPINA3P01011 423 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 ENTPD1P49961 510 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 RPS18P62269 152 aaKnown RBP7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 PLCXD2Q0VAA5 305 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 FGFBP1Q14512 234 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 SGCAQ16586 387 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 PTCHD4Q6ZW05 846 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 RANBP3LQ86VV4 465 aaPredicted RBP7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 MARCH9Q86YJ5 346 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 SPPL2CQ8IUH8 684 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 ZNF440Q8IYI8 595 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 DEPDC4Q8N2C3 294 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 PIK3R3Q92569 461 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 C8orf44Q96CB5 159 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms