RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 TMEM64Q6YI46 380 aa17.29■□□□□ 0.36
PCDH1-201ENST00000287008 AAED1Q7RTV5 226 aa17.29■□□□□ 0.36
PCDH1-201ENST00000287008 TEX19Q8NA77 164 aa17.29■□□□□ 0.36
PCDH1-201ENST00000287008 OR51B6Q9H340 312 aa17.29■□□□□ 0.36
PCDH1-201ENST00000287008 TRAV18A0A075B6X5 111 aa17.29■□□□□ 0.36
PCDH1-201ENST00000287008 GCAP28676 217 aa17.29■□□□□ 0.36
PCDH1-201ENST00000287008 PGFP49763 221 aa17.29■□□□□ 0.36
PCDH1-201ENST00000287008 RPS19BP1Q86WX3 136 aaKnown RBP17.29■□□□□ 0.36
PCDH1-201ENST00000287008 ESX1Q8N693 406 aa17.29■□□□□ 0.36
PCDH1-201ENST00000287008 RSC1A1Q92681 617 aa17.29■□□□□ 0.36
PCDH1-201ENST00000287008 PPP1R14BQ96C90 147 aa17.29■□□□□ 0.36
PCDH1-201ENST00000287008 SYT3Q9BQG1 590 aa17.29■□□□□ 0.36
PCDH1-201ENST00000287008 EMC9Q9Y3B6 208 aa17.29■□□□□ 0.36
PCDH1-201ENST00000287008 WIF1Q9Y5W5 379 aa17.29■□□□□ 0.36
PCDH1-201ENST00000287008 LTBP4Q8N2S1 1624 aa17.29■□□□□ 0.36
PCDH1-201ENST00000287008 G3V3Y1 287 aa17.28■□□□□ 0.36
PCDH1-201ENST00000287008 KLRC4-KLRK1H3BQV0 150 aa17.28■□□□□ 0.36
PCDH1-201ENST00000287008 SCGB2A1O75556 95 aa17.28■□□□□ 0.36
PCDH1-201ENST00000287008 DDAH2O95865 285 aa17.28■□□□□ 0.36
PCDH1-201ENST00000287008 Q6ZSR9 355 aa17.28■□□□□ 0.36
PCDH1-201ENST00000287008 LANCL3Q6ZV70 420 aa17.28■□□□□ 0.36
PCDH1-201ENST00000287008 VASH1Q7L8A9 365 aaPredicted RBP17.28■□□□□ 0.36
PCDH1-201ENST00000287008 SENP5Q96HI0 755 aaPredicted RBP17.28■□□□□ 0.36
PCDH1-201ENST00000287008 WASH6PQ9NQA3 447 aa17.28■□□□□ 0.36
PCDH1-201ENST00000287008 TAF1P21675 1872 aa17.28■□□□□ 0.36
PCDH1-201ENST00000287008 SLC5A10A0PJK1 596 aa17.28■□□□□ 0.36
PCDH1-201ENST00000287008 SLC43A1O75387 559 aa17.28■□□□□ 0.36
PCDH1-201ENST00000287008 IGLV3-27P01718 113 aa17.28■□□□□ 0.36
PCDH1-201ENST00000287008 BCL6P41182 706 aa17.28■□□□□ 0.36
PCDH1-201ENST00000287008 RGS6P49758 472 aa17.28■□□□□ 0.36
PCDH1-201ENST00000287008 CCL11P51671 97 aa17.28■□□□□ 0.36
PCDH1-201ENST00000287008 KEAP1Q14145 624 aa17.28■□□□□ 0.36
PCDH1-201ENST00000287008 ZNF322Q6U7Q0 402 aaPredicted RBP17.28■□□□□ 0.36
PCDH1-201ENST00000287008 RAB11FIP2Q7L804 512 aa17.28■□□□□ 0.36
PCDH1-201ENST00000287008 TBC1D15Q8TC07 691 aa17.28■□□□□ 0.36
PCDH1-201ENST00000287008 FGF14Q92915 247 aa17.28■□□□□ 0.36
PCDH1-201ENST00000287008 CCDC74AQ96AQ1 378 aa17.28■□□□□ 0.36
PCDH1-201ENST00000287008 MKRN2Q9H000 416 aaKnown RBP17.28■□□□□ 0.36
PCDH1-201ENST00000287008 ZNF696Q9H7X3 374 aa17.28■□□□□ 0.36
PCDH1-201ENST00000287008 SLC6A20Q9NP91 592 aa17.28■□□□□ 0.36
PCDH1-201ENST00000287008 REV1Q9UBZ9 1251 aa17.28■□□□□ 0.36
PCDH1-201ENST00000287008 TARM1B6A8C7 271 aa17.28■□□□□ 0.36
PCDH1-201ENST00000287008 PTHP01270 115 aa17.28■□□□□ 0.36
PCDH1-201ENST00000287008 CHMP24386 653 aa17.28■□□□□ 0.36
PCDH1-201ENST00000287008 TACR3P29371 465 aa17.28■□□□□ 0.36
PCDH1-201ENST00000287008 CDK5R2Q13319 367 aa17.28■□□□□ 0.36
PCDH1-201ENST00000287008 PGGHGQ32M88 737 aa17.28■□□□□ 0.36
PCDH1-201ENST00000287008 LRRC37A5PQ49AS3 106 aa17.28■□□□□ 0.36
PCDH1-201ENST00000287008 SCGB1C1Q8TD33 95 aa17.28■□□□□ 0.36
PCDH1-201ENST00000287008 FUNDC2Q9BWH2 189 aa17.28■□□□□ 0.36
PCDH1-201ENST00000287008 GYPBP06028 91 aa17.28■□□□□ 0.36
PCDH1-201ENST00000287008 NUDT7P0C024 238 aa17.28■□□□□ 0.36
PCDH1-201ENST00000287008 S100A1P23297 94 aa17.28■□□□□ 0.36
PCDH1-201ENST00000287008 MAN2A2P49641 1150 aa17.28■□□□□ 0.36
PCDH1-201ENST00000287008 LSM14AQ8ND56 463 aaKnown RBP17.28■□□□□ 0.36
PCDH1-201ENST00000287008 NXF5Q9H1B4 397 aaKnown RBP17.28■□□□□ 0.36
PCDH1-201ENST00000287008 ATG12O94817 140 aa17.27■□□□□ 0.36
PCDH1-201ENST00000287008 LTB4RQ15722 352 aa17.27■□□□□ 0.36
PCDH1-201ENST00000287008 C9orf135Q5VTT2 229 aa17.27■□□□□ 0.36
PCDH1-201ENST00000287008 PLAG1Q6DJT9 500 aa17.27■□□□□ 0.36
PCDH1-201ENST00000287008 SLC48A1Q6P1K1 146 aa17.27■□□□□ 0.36
PCDH1-201ENST00000287008 GDPGP1Q6ZNW5 385 aa17.27■□□□□ 0.36
PCDH1-201ENST00000287008 SLC38A5Q8WUX1 472 aa17.27■□□□□ 0.36
PCDH1-201ENST00000287008 ZNF775Q96BV0 537 aaPredicted RBP17.27■□□□□ 0.36
PCDH1-201ENST00000287008 ZNF587Q96SQ5 575 aaPredicted RBP17.27■□□□□ 0.36
PCDH1-201ENST00000287008 ELF4Q99607 663 aaPredicted RBP17.27■□□□□ 0.36
PCDH1-201ENST00000287008 NUDT22Q9BRQ3 303 aa17.27■□□□□ 0.36
PCDH1-201ENST00000287008 ATG4BQ9Y4P1 393 aa17.27■□□□□ 0.36
PCDH1-201ENST00000287008 PHIPQ8WWQ0 1821 aa17.27■□□□□ 0.36
PCDH1-201ENST00000287008 BORCS7-ASMTA0A0B4J1R7 106 aa17.27■□□□□ 0.36
PCDH1-201ENST00000287008 A0A1W2PPC4 97 aa17.27■□□□□ 0.36
PCDH1-201ENST00000287008 C2CD4DB7Z1M9 353 aa17.27■□□□□ 0.36
PCDH1-201ENST00000287008 CRTAPO75718 401 aaPredicted RBP17.27■□□□□ 0.36
PCDH1-201ENST00000287008 IGLV3-25P01717 112 aa17.27■□□□□ 0.36
PCDH1-201ENST00000287008 SERPINA5P05154 406 aa17.27■□□□□ 0.36
PCDH1-201ENST00000287008 LCN1P31025 176 aa17.27■□□□□ 0.36
PCDH1-201ENST00000287008 GIPRP48546 466 aa17.27■□□□□ 0.36
PCDH1-201ENST00000287008 CYB561P49447 251 aa17.27■□□□□ 0.36
PCDH1-201ENST00000287008 ASRGL1Q7L266 308 aa17.27■□□□□ 0.36
PCDH1-201ENST00000287008 SLC16A14Q7RTX9 510 aa17.27■□□□□ 0.36
PCDH1-201ENST00000287008 PIAS4Q8N2W9 510 aaPredicted RBP17.27■□□□□ 0.36
PCDH1-201ENST00000287008 NHSQ6T4R5 1651 aa17.27■□□□□ 0.35
PCDH1-201ENST00000287008 LINC01565O15544 149 aa17.27■□□□□ 0.35
PCDH1-201ENST00000287008 F13BP05160 661 aa17.27■□□□□ 0.35
PCDH1-201ENST00000287008 CR2P20023 1033 aa17.27■□□□□ 0.35
PCDH1-201ENST00000287008 RAB3AP20336 220 aa17.27■□□□□ 0.35
PCDH1-201ENST00000287008 CXCR4P61073 352 aa17.27■□□□□ 0.35
PCDH1-201ENST00000287008 RAB40BQ12829 278 aa17.27■□□□□ 0.35
PCDH1-201ENST00000287008 EXT1Q16394 746 aa17.27■□□□□ 0.35
PCDH1-201ENST00000287008 TMEM196Q5HYL7 178 aa17.27■□□□□ 0.35
PCDH1-201ENST00000287008 HES5Q5TA89 166 aa17.27■□□□□ 0.35
PCDH1-201ENST00000287008 MED25Q71SY5 747 aa17.27■□□□□ 0.35
PCDH1-201ENST00000287008 OR5H2Q8NGV7 314 aa17.27■□□□□ 0.35
PCDH1-201ENST00000287008 DDX31Q9H8H2 851 aaKnown RBP17.27■□□□□ 0.35
PCDH1-201ENST00000287008 FOLH1BQ9HBA9 442 aa17.27■□□□□ 0.35
PCDH1-201ENST00000287008 ISPDA4D126 451 aa17.27■□□□□ 0.35
PCDH1-201ENST00000287008 KDM4EB2RXH2 506 aaPredicted RBP17.27■□□□□ 0.35
PCDH1-201ENST00000287008 PEX14O75381 377 aa17.27■□□□□ 0.35
PCDH1-201ENST00000287008 POLR2HP52434 150 aaKnown RBP17.27■□□□□ 0.35
PCDH1-201ENST00000287008 PSPHP78330 225 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms