RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 KLHL28Q9NXS3 571 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 DNAJB12Q9NXW2 375 aaKnown RBP5.89□□□□□ -1.47
CD44-204ENST00000279452 SELENONQ9NZV5 590 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 RPS6KB2Q9UBS0 482 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 Q9UFV3 132 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 MCTS1Q9ULC4 181 aaKnown RBP5.89□□□□□ -1.47
CD44-204ENST00000279452 SPIN1Q9Y657 262 aaPredicted RBP5.89□□□□□ -1.47
CD44-204ENST00000279452 DSPPQ9NZW4 1301 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 BOD1L1Q8NFC6 3051 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 CROCCQ5TZA2 2017 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 SHANK1Q9Y566 2161 aa5.89□□□□□ -1.47
CD44-204ENST00000279452 SPTA1P02549 2419 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 A0A1W2PNR3 127 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 C7orf72A4D263 438 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 CDHR4A6H8M9 788 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 CD8B2A6NJW9 211 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 CCT8L1PA6NM43 557 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 FXYD1O00168 92 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 NDUFAB1O14561 156 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 SMNDC1O75940 238 aaKnown RBP eCLIP5.88□□□□□ -1.47
CD44-204ENST00000279452 CLDN1O95832 211 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 FAM107AO95990 144 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 NPPAP01160 153 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 FCGR2AP12318 317 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 BMP2P12643 396 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 PRG2P13727 222 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 RPS4Y1P22090 263 aaKnown RBP5.88□□□□□ -1.47
CD44-204ENST00000279452 CXCR1P25024 350 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 COL8A1P27658 744 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 ADH6P28332 368 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 HTR1EP28566 365 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 SHC1P29353 583 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 TACR3P29371 465 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 PRKAR1BP31321 381 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 UQCRC1P31930 480 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 PCGF2P35227 344 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 CPOXP36551 454 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 POLR2HP52434 150 aaKnown RBP5.88□□□□□ -1.47
CD44-204ENST00000279452 SLC7A2P52569 658 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 RGS8P57771 180 aaPredicted RBP5.88□□□□□ -1.47
CD44-204ENST00000279452 RAC1P63000 192 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 EEF1A1P68104 462 aaKnown RBP5.88□□□□□ -1.47
CD44-204ENST00000279452 HOXC5Q00444 222 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 RBBP4Q09028 425 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 ZSWIM7Q19AV6 140 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 VMACQ2NL98 169 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 TMEM176BQ3YBM2 270 aaPredicted RBP5.88□□□□□ -1.47
CD44-204ENST00000279452 RIPPLY2Q5TAB7 128 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 RNF220Q5VTB9 566 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 PRAMEF8Q5VWM4 474 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 PRAMEF7Q5VXH5 474 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 HIST2H2BCQ6DN03 193 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 ERICH5Q6P6B1 374 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 ESPNLQ6ZVH7 1005 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 PLEKHM3Q6ZWE6 761 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 GRINAQ7Z429 371 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 SERPINA11Q86U17 422 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 GGNQ86UU5 652 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 RANBP3LQ86VV4 465 aaPredicted RBP5.88□□□□□ -1.47
CD44-204ENST00000279452 PTOV1Q86YD1 416 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 TREML1Q86YW5 311 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 SLC30A8Q8IWU4 369 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 CLIP4Q8N3C7 705 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 ANKS4BQ8N8V4 417 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 C9orf106Q8NAJ2 232 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 NAXEQ8NCW5 288 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 FAM71CQ8NEG0 241 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 OR2T12Q8NG77 320 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 FNDC9Q8TBE3 224 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 FIG4Q92562 907 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 PMM1Q92871 262 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 LRRC46Q96FV0 321 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 MYLK2Q9H1R3 596 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 CALHM2Q9HA72 323 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 BCL2L10Q9HD36 194 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 KCNJ16Q9NPI9 418 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 TIGARQ9NQ88 270 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 ACER3Q9NUN7 267 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 ADA2Q9NZK5 511 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 CLCF1Q9UBD9 225 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 CHRNA9Q9UGM1 479 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 CLEC4AQ9UMR7 237 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 USP22Q9UPT9 525 aa5.88□□□□□ -1.47
CD44-204ENST00000279452 SMG1Q96Q15 3661 aaKnown RBP5.87□□□□□ -1.47
CD44-204ENST00000279452 TMED7-TICAM2A0A0A6YYA0 188 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 IGHV3-15A0A0B4J1V0 119 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 A0A0J9YW62 118 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 MBD3L4A6NDZ8 208 aaPredicted RBP5.87□□□□□ -1.47
CD44-204ENST00000279452 MBD3L3A6NE82 208 aaPredicted RBP5.87□□□□□ -1.47
CD44-204ENST00000279452 WIPF3A6NGB9 483 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 MBD3L5A6NJ08 208 aaPredicted RBP5.87□□□□□ -1.47
CD44-204ENST00000279452 ELOA3DA6NLF2 546 aaPredicted RBP5.87□□□□□ -1.47
CD44-204ENST00000279452 FAM220BPB1ANY3 271 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 M0QX08 132 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 M0R3H8 397 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 SULT2B1O00204 365 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 ADAM11O75078 769 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 TOXO94900 526 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 TGM6O95932 706 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 IFNA14P01570 189 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms