RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 SEMA4GQ9NTN9 838 aa11.92□□□□□ -0.5
HERC6-202ENST00000273960 COA4Q9NYJ1 87 aa11.92□□□□□ -0.5
HERC6-202ENST00000273960 TAS2R10Q9NYW0 307 aa11.92□□□□□ -0.5
HERC6-202ENST00000273960 MARK1Q9P0L2 795 aa11.92□□□□□ -0.5
HERC6-202ENST00000273960 CACNA1IQ9P0X4 2223 aa11.92□□□□□ -0.5
HERC6-202ENST00000273960 TDRD15B5MCY1 1934 aaKnown RBP11.92□□□□□ -0.5
HERC6-202ENST00000273960 SULT1C2O00338 296 aa11.92□□□□□ -0.5
HERC6-202ENST00000273960 MANEAQ5SRI9 462 aa11.92□□□□□ -0.5
HERC6-202ENST00000273960 RAB12Q6IQ22 244 aa11.92□□□□□ -0.5
HERC6-202ENST00000273960 LIN54Q6MZP7 749 aa11.92□□□□□ -0.5
HERC6-202ENST00000273960 LDLRAD3Q86YD5 345 aa11.92□□□□□ -0.5
HERC6-202ENST00000273960 DUSP19Q8WTR2 217 aa11.92□□□□□ -0.5
HERC6-202ENST00000273960 ZNF559Q9BR84 538 aa11.92□□□□□ -0.5
HERC6-202ENST00000273960 DPH1Q9BZG8 443 aa11.92□□□□□ -0.5
HERC6-202ENST00000273960 TREM1Q9NP99 234 aa11.92□□□□□ -0.5
HERC6-202ENST00000273960 ZDHHC4Q9NPG8 344 aa11.92□□□□□ -0.5
HERC6-202ENST00000273960 HCFC1R1Q9NWW0 138 aa11.92□□□□□ -0.5
HERC6-202ENST00000273960 SPG21Q9NZD8 308 aa11.92□□□□□ -0.5
HERC6-202ENST00000273960 PURGQ9UJV8 347 aaKnown RBP11.92□□□□□ -0.5
HERC6-202ENST00000273960 CA5BQ9Y2D0 317 aa11.92□□□□□ -0.5
HERC6-202ENST00000273960 DYRK1BQ9Y463 629 aa11.92□□□□□ -0.5
HERC6-202ENST00000273960 MYO16Q9Y6X6 1858 aa11.92□□□□□ -0.5
HERC6-202ENST00000273960 UBE2QL1A1L167 161 aa11.92□□□□□ -0.5
HERC6-202ENST00000273960 NEDD8-MDP1E9PL57 170 aa11.92□□□□□ -0.5
HERC6-202ENST00000273960 CCSO14618 274 aa11.92□□□□□ -0.5
HERC6-202ENST00000273960 MST1P26927 711 aa11.92□□□□□ -0.5
HERC6-202ENST00000273960 RPL3P39023 403 aaKnown RBP11.92□□□□□ -0.5
HERC6-202ENST00000273960 BLOC1S1P78537 153 aa11.92□□□□□ -0.5
HERC6-202ENST00000273960 KLF9Q13886 244 aaPredicted RBP11.92□□□□□ -0.5
HERC6-202ENST00000273960 SLC22A10Q63ZE4 541 aa11.92□□□□□ -0.5
HERC6-202ENST00000273960 CDH26Q8IXH8 852 aa11.92□□□□□ -0.5
HERC6-202ENST00000273960 OR51A7Q8NH64 312 aa11.92□□□□□ -0.5
HERC6-202ENST00000273960 SMPDL3BQ92485 455 aa11.92□□□□□ -0.5
HERC6-202ENST00000273960 RAD51AP1Q96B01 352 aa11.92□□□□□ -0.5
HERC6-202ENST00000273960 BIN3Q9NQY0 253 aa11.92□□□□□ -0.5
HERC6-202ENST00000273960 GNB5O14775 395 aa11.91□□□□□ -0.5
HERC6-202ENST00000273960 ZNF821O75541 412 aaPredicted RBP11.91□□□□□ -0.5
HERC6-202ENST00000273960 CDC123O75794 336 aaPredicted RBP11.91□□□□□ -0.5
HERC6-202ENST00000273960 CATP04040 527 aaKnown RBP11.91□□□□□ -0.5
HERC6-202ENST00000273960 CRYBA1P05813 215 aa11.91□□□□□ -0.5
HERC6-202ENST00000273960 PCSK2P16519 638 aa11.91□□□□□ -0.5
HERC6-202ENST00000273960 PPP2R1BP30154 601 aa11.91□□□□□ -0.5
HERC6-202ENST00000273960 STX4Q12846 297 aa11.91□□□□□ -0.5
HERC6-202ENST00000273960 SP140Q13342 867 aa11.91□□□□□ -0.5
HERC6-202ENST00000273960 FAM219AQ8IW50 185 aa11.91□□□□□ -0.5
HERC6-202ENST00000273960 PINK1Q9BXM7 581 aa11.91□□□□□ -0.5
HERC6-202ENST00000273960 DHCR7Q9UBM7 475 aaKnown RBP11.91□□□□□ -0.5
HERC6-202ENST00000273960 CBLCQ9ULV8 474 aa11.91□□□□□ -0.5
HERC6-202ENST00000273960 RALGAPA2Q2PPJ7 1873 aa11.91□□□□□ -0.5
HERC6-202ENST00000273960 A0A1W2PS29 197 aa11.91□□□□□ -0.5
HERC6-202ENST00000273960 CDHR4A6H8M9 788 aa11.91□□□□□ -0.5
HERC6-202ENST00000273960 FLRT2O43155 660 aa11.91□□□□□ -0.5
HERC6-202ENST00000273960 PRAMEF2O60811 474 aa11.91□□□□□ -0.5
HERC6-202ENST00000273960 NOS3P29474 1203 aa11.91□□□□□ -0.5
HERC6-202ENST00000273960 SOX2P48431 317 aa11.91□□□□□ -0.5
HERC6-202ENST00000273960 RPS15P62841 145 aaKnown RBP11.91□□□□□ -0.5
HERC6-202ENST00000273960 MRPL58Q14197 206 aaKnown RBP11.91□□□□□ -0.5
HERC6-202ENST00000273960 TAF13Q15543 124 aa11.91□□□□□ -0.5
HERC6-202ENST00000273960 RAB11FIP2Q7L804 512 aa11.91□□□□□ -0.5
HERC6-202ENST00000273960 LRRTM1Q86UE6 522 aa11.91□□□□□ -0.5
HERC6-202ENST00000273960 ZNF485Q8NCK3 441 aa11.91□□□□□ -0.5
HERC6-202ENST00000273960 SFT2D1Q8WV19 159 aa11.91□□□□□ -0.5
HERC6-202ENST00000273960 ZNF334Q9HCZ1 680 aaPredicted RBP11.91□□□□□ -0.5
HERC6-202ENST00000273960 EXOSC3Q9NQT5 275 aaKnown RBP11.91□□□□□ -0.5
HERC6-202ENST00000273960 PLXNA4Q9HCM2 1894 aa11.91□□□□□ -0.5
HERC6-202ENST00000273960 PATJQ8NI35 1801 aa11.91□□□□□ -0.5
HERC6-202ENST00000273960 POM121BA6NF01 834 aa11.91□□□□□ -0.5
HERC6-202ENST00000273960 TMEM189-UBE2V1I3L0A0 370 aa11.91□□□□□ -0.5
HERC6-202ENST00000273960 C8AP07357 584 aa11.91□□□□□ -0.5
HERC6-202ENST00000273960 PTBP1P26599 531 aaKnown RBP eCLIP11.91□□□□□ -0.5
HERC6-202ENST00000273960 MPIP34949 423 aa11.91□□□□□ -0.5
HERC6-202ENST00000273960 PTH2RP49190 550 aa11.91□□□□□ -0.5
HERC6-202ENST00000273960 RAP2BP61225 183 aa11.91□□□□□ -0.5
HERC6-202ENST00000273960 PITPNAQ00169 270 aa11.91□□□□□ -0.5
HERC6-202ENST00000273960 CLINT1Q14677 625 aa11.91□□□□□ -0.5
HERC6-202ENST00000273960 C9orf152Q5JTZ5 239 aa11.91□□□□□ -0.5
HERC6-202ENST00000273960 FAM71E1Q6IPT2 247 aa11.91□□□□□ -0.5
HERC6-202ENST00000273960 AMER3Q8N944 861 aa11.91□□□□□ -0.5
HERC6-202ENST00000273960 DNAAF1Q8NEP3 725 aa11.91□□□□□ -0.5
HERC6-202ENST00000273960 ZNF480Q8WV37 535 aa11.91□□□□□ -0.5
HERC6-202ENST00000273960 APOBEC4Q8WW27 367 aaKnown RBP11.91□□□□□ -0.5
HERC6-202ENST00000273960 TEX12Q9BXU0 123 aa11.91□□□□□ -0.5
HERC6-202ENST00000273960 CHST6Q9GZX3 395 aa11.91□□□□□ -0.5
HERC6-202ENST00000273960 DMRT3Q9NQL9 472 aa11.91□□□□□ -0.5
HERC6-202ENST00000273960 PRMT8Q9NR22 394 aaPredicted RBP11.91□□□□□ -0.5
HERC6-202ENST00000273960 B4GALT6Q9UBX8 382 aa11.91□□□□□ -0.5
HERC6-202ENST00000273960 PLEKHM1Q9Y4G2 1056 aa11.91□□□□□ -0.5
HERC6-202ENST00000273960 INSL5Q9Y5Q6 135 aa11.91□□□□□ -0.5
HERC6-202ENST00000273960 SCN2AQ99250 2005 aa11.9□□□□□ -0.5
HERC6-202ENST00000273960 PLXND1Q9Y4D7 1925 aa11.9□□□□□ -0.5
HERC6-202ENST00000273960 A0A087WV48 116 aa11.9□□□□□ -0.5
HERC6-202ENST00000273960 H0YIV9 168 aa11.9□□□□□ -0.5
HERC6-202ENST00000273960 CDC42EP2O14613 210 aa11.9□□□□□ -0.5
HERC6-202ENST00000273960 AGPAT2O15120 278 aa11.9□□□□□ -0.5
HERC6-202ENST00000273960 ACAA1P09110 424 aaPredicted RBP11.9□□□□□ -0.5
HERC6-202ENST00000273960 TRHRP34981 398 aaPredicted RBP11.9□□□□□ -0.5
HERC6-202ENST00000273960 PRMT2P55345 433 aa11.9□□□□□ -0.5
HERC6-202ENST00000273960 AP1S2P56377 157 aa11.9□□□□□ -0.5
HERC6-202ENST00000273960 KCNAB1Q14722 419 aa11.9□□□□□ -0.5
HERC6-202ENST00000273960 SMAD2Q15796 467 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms