RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 TMIGD2Q96BF3 282 aa13.37□□□□□ -0.27
PDLIM2-201ENST00000265810 ISOC1Q96CN7 298 aa13.37□□□□□ -0.27
PDLIM2-201ENST00000265810 TIMMDC1Q9NPL8 285 aa13.37□□□□□ -0.27
PDLIM2-201ENST00000265810 MED11Q9P086 117 aa13.37□□□□□ -0.27
PDLIM2-201ENST00000265810 ACOT7O00154 380 aa13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 HRO43593 1189 aa13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 RFPL3O75679 317 aa13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 ACVR1BP36896 505 aa13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 MRPL28Q13084 256 aaKnown RBP13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 PGGHGQ32M88 737 aa13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 ADPRMQ3LIE5 342 aa13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 MRM1Q6IN84 353 aaKnown RBP13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 LANCL3Q6ZV70 420 aa13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 PRICKLE2Q7Z3G6 844 aa13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 HDDC2Q7Z4H3 204 aa13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 CARFQ8N187 725 aa13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 SYT14Q8NB59 555 aa13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 MORN4Q8NDC4 146 aa13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 VN1R1Q9GZP7 353 aa13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 TWSG1Q9GZX9 223 aa13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 DSN1Q9H410 356 aa13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 RXFP3Q9NSD7 469 aa13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 A0A1W2PR77 199 aa13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 PRODHO43272 600 aa13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 PTPRDP23468 1912 aa13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 MMP11P24347 488 aa13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 SDC2P34741 201 aa13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 DLSTP36957 453 aa13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 MAP3K8P41279 467 aa13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 OMPP47874 163 aa13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 RORCP51449 518 aa13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 PWWP2BQ6NUJ5 590 aa13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 DHRS4L2Q6PKH6 230 aa13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 PLEKHG7Q6ZR37 379 aa13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 UEVLDQ8IX04 471 aa13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 WDR12Q9GZL7 423 aaKnown RBP13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 GPATCH2Q9NW75 528 aa13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 STMN3Q9NZ72 180 aa13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 CDRT1O95170 752 aa13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 ITIH1P19827 911 aa13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 C21orf33P30042 268 aaPredicted RBP13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 ACTC1P68032 377 aa13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 ACTA1P68133 377 aa13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 ROR2Q01974 943 aaKnown RBP13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 IL18Q14116 193 aa13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 ZNF613Q6PF04 617 aa13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 CROCCP3Q8IVE0 287 aa13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 OR2L13Q8N349 312 aa13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 CNN2Q99439 309 aaKnown RBP13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 GAL3ST1Q99999 423 aa13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 ZNF717Q9BY31 904 aaPredicted RBP13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 GPR179Q6PRD1 2367 aa13.36□□□□□ -0.27
PDLIM2-201ENST00000265810 A0A087WUU8 490 aa13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 C12orf71A8MTZ7 269 aa13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 ZNF182P17025 639 aaPredicted RBP13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 RGS21Q2M5E4 152 aa13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 KDM4DQ6B0I6 523 aa13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 PGBD2Q6P3X8 592 aa13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 KLHL17Q6TDP4 642 aa13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 WDR77Q9BQA1 342 aaPredicted RBP13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 UCK1Q9HA47 277 aa13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 SLCO1B1Q9Y6L6 691 aa13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 PLXNA3P51805 1871 aa13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 FRMPD3Q5JV73 1810 aa13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 C21orf58P58505 322 aa13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 TRA2AQ13595 282 aaKnown RBP eCLIP13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 RNASE12Q5GAN4 147 aaKnown RBP13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 SLC22A10Q63ZE4 541 aa13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 KCTD18Q6PI47 426 aaPredicted RBP13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 WDR74Q6RFH5 385 aaPredicted RBP13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 B3GNT8Q7Z7M8 397 aa13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 CMIPQ8IY22 773 aa13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 PMM1Q92871 262 aa13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 MROQ9BYG7 248 aa13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 SIRT3Q9NTG7 399 aaPredicted RBP13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 CAB39Q9Y376 341 aaPredicted RBP13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 PEX16Q9Y5Y5 336 aa13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 A0A1W2PRQ8 180 aa13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 SUSD5O60279 629 aa13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 STK17BO94768 372 aa13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 CRHBPP24387 322 aa13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 HNRNPFP52597 415 aaKnown RBP13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 ILKQ13418 452 aa13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 IL11RAQ14626 422 aa13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 TMEM176BQ3YBM2 270 aaPredicted RBP13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 UBE2FQ969M7 185 aa13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 NUDT9Q9BW91 350 aa13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 ATP13A2Q9NQ11 1180 aa13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 FARSAQ9Y285 508 aaKnown RBP13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 PIP5K1CO60331 668 aa13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 C1orf94Q6P1W5 598 aa13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 XKR5Q6UX68 686 aa13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 TMEM179BQ7Z7N9 219 aa13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 MISPQ8IVT2 679 aa13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 OR1J4Q8NGS1 313 aa13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 LHPPQ9H008 270 aa13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 SEC14L4Q9UDX3 406 aa13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 ST14Q9Y5Y6 855 aa13.35□□□□□ -0.27
PDLIM2-201ENST00000265810 GJE1A6NN92 205 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms