RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 TSPAN33Q86UF1 283 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 MMP21Q8N119 569 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 SVBPQ8N300 66 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 SPICQ8N5J4 248 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 C12orf76Q8N812 135 aaPredicted RBP8.15□□□□□ -1.1
VAPB-201ENST00000265619 ZNF461Q8TAF7 563 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 PNPLA2Q96AD5 504 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 FUBP3Q96I24 572 aaKnown RBP eCLIP8.15□□□□□ -1.1
VAPB-201ENST00000265619 TMEM68Q96MH6 324 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 SYNDIG1Q9H7V2 258 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 ZNF334Q9HCZ1 680 aaPredicted RBP8.15□□□□□ -1.1
VAPB-201ENST00000265619 C1GALT1Q9NS00 363 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 E7EQ34 232 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 GOSR2O14653 212 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 RNF13O43567 381 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 NFATC1O95644 943 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 TACR2P21452 398 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 RAG2P55895 527 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 RAP2BP61225 183 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 SLC3A1Q07837 685 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 SMCO1Q147U7 214 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 LRRC73Q5JTD7 316 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 MACC1Q6ZN28 852 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 LRRTM1Q86UE6 522 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 TMEM17Q86X19 198 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 MISPQ8IVT2 679 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 NPAS3Q8IXF0 933 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 OR52I2Q8NH67 350 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 SETD7Q8WTS6 366 aaKnown RBP8.15□□□□□ -1.1
VAPB-201ENST00000265619 SKA2Q8WVK7 121 aaPredicted RBP8.15□□□□□ -1.1
VAPB-201ENST00000265619 C3orf49Q96BT1 292 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 ECHDC3Q96DC8 303 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 TCEAL4Q96EI5 215 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 WRAP53Q9BUR4 548 aaKnown RBP8.15□□□□□ -1.1
VAPB-201ENST00000265619 CFHR5Q9BXR6 569 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 MFFQ9GZY8 342 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 FAM96BQ9Y3D0 163 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 PCDHB9Q9Y5E1 797 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 DNAH14Q0VDD8 3507 aa8.15□□□□□ -1.11
VAPB-201ENST00000265619 TRAV14DV4A0A0A6YYC5 116 aa8.15□□□□□ -1.11
VAPB-201ENST00000265619 A0A1B0GUH1 482 aa8.15□□□□□ -1.11
VAPB-201ENST00000265619 ANKRD61A6NGH8 418 aa8.15□□□□□ -1.11
VAPB-201ENST00000265619 TERTO14746 1132 aaKnown RBP8.15□□□□□ -1.11
VAPB-201ENST00000265619 TBL1XO60907 577 aa8.15□□□□□ -1.11
VAPB-201ENST00000265619 STK16O75716 305 aa8.15□□□□□ -1.11
VAPB-201ENST00000265619 SOD2P04179 222 aa8.15□□□□□ -1.11
VAPB-201ENST00000265619 IFNW1P05000 195 aa8.15□□□□□ -1.11
VAPB-201ENST00000265619 S100A8P05109 93 aa8.15□□□□□ -1.11
VAPB-201ENST00000265619 C8AP07357 584 aa8.15□□□□□ -1.11
VAPB-201ENST00000265619 RHOCP08134 193 aa8.15□□□□□ -1.11
VAPB-201ENST00000265619 DCTDP32321 178 aa8.15□□□□□ -1.11
VAPB-201ENST00000265619 MMP15P51511 669 aa8.15□□□□□ -1.11
VAPB-201ENST00000265619 PGDP52209 483 aa8.15□□□□□ -1.11
VAPB-201ENST00000265619 PPIAP62937 165 aaKnown RBP8.15□□□□□ -1.11
VAPB-201ENST00000265619 RELQ04864 619 aaPredicted RBP8.15□□□□□ -1.11
VAPB-201ENST00000265619 BEND4Q6ZU67 534 aa8.15□□□□□ -1.11
VAPB-201ENST00000265619 SLITRK4Q8IW52 837 aa8.15□□□□□ -1.11
VAPB-201ENST00000265619 DCUN1D3Q8IWE4 304 aa8.15□□□□□ -1.11
VAPB-201ENST00000265619 ZNF683Q8IZ20 524 aa8.15□□□□□ -1.11
VAPB-201ENST00000265619 SIRT6Q8N6T7 355 aa8.15□□□□□ -1.11
VAPB-201ENST00000265619 SLC35A5Q9BS91 424 aa8.15□□□□□ -1.11
VAPB-201ENST00000265619 TRIM62Q9BVG3 475 aa8.15□□□□□ -1.11
VAPB-201ENST00000265619 GGACTQ9BVM4 153 aa8.15□□□□□ -1.11
VAPB-201ENST00000265619 BRD9Q9H8M2 597 aa8.15□□□□□ -1.11
VAPB-201ENST00000265619 MED11Q9P086 117 aa8.15□□□□□ -1.11
VAPB-201ENST00000265619 A0A1B0GWJ7 208 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 DRGXA6NNA5 263 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 PYCARD-AS1I3L0S3 204 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 WRBO00258 174 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 SCAMP2O15127 329 aaKnown RBP8.14□□□□□ -1.11
VAPB-201ENST00000265619 PPIHO43447 177 aaKnown RBP8.14□□□□□ -1.11
VAPB-201ENST00000265619 FMO6PO60774 539 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 SLC25A14O95258 325 aaPredicted RBP8.14□□□□□ -1.11
VAPB-201ENST00000265619 SFTPCP11686 197 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 TMEM11P17152 192 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 LAP3P28838 519 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 GPR143P51810 404 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 RPS15P62841 145 aaKnown RBP8.14□□□□□ -1.11
VAPB-201ENST00000265619 DEFA6Q01524 100 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 MEF2AQ02078 507 aaPredicted RBP8.14□□□□□ -1.11
VAPB-201ENST00000265619 SRSF11Q05519 484 aaKnown RBP8.14□□□□□ -1.11
VAPB-201ENST00000265619 DCST1Q5T197 706 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 IER5LQ5T953 404 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 ZNF626Q68DY1 528 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 PODNL1Q6PEZ8 512 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 CFAP206Q8IYR0 622 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 UMODL1-AS1Q8N2C9 162 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 WDSUB1Q8N9V3 476 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 C17orf47Q8NEP4 570 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 C19orf43Q9BQ61 176 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 SLC25A32Q9H2D1 315 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 ACKR4Q9NPB9 350 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 ISYNA1Q9NPH2 558 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 MEPEQ9NQ76 525 aaPredicted RBP8.14□□□□□ -1.11
VAPB-201ENST00000265619 MBD1Q9UIS9 605 aaPredicted RBP8.14□□□□□ -1.11
VAPB-201ENST00000265619 TRIOO75962 3097 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 SMAD6O43541 496 aaKnown RBP8.14□□□□□ -1.11
VAPB-201ENST00000265619 SLC28A2O43868 658 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 HEXBP07686 556 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 EPXP11678 715 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms