RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 SUOXP51687 545 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 HTR4Q13639 388 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 VEZF1Q14119 521 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 PDZD11Q5EBL8 140 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 ZNF776Q68DI1 518 aaPredicted RBP5.38□□□□□ -1.55
VCAN-201ENST00000265077 RGMBQ6NW40 437 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 KREMEN2Q8NCW0 462 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 TFGQ92734 400 aaPredicted RBP5.38□□□□□ -1.55
VCAN-201ENST00000265077 TECTBQ96PL2 329 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 SORT1Q99523 831 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 CMSS1Q9BQ75 279 aaKnown RBP5.38□□□□□ -1.55
VCAN-201ENST00000265077 KLHL9Q9P2J3 617 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 RHCGQ9UBD6 479 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 CA14Q9ULX7 337 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 MED6O75586 246 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 FBP1P09467 338 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 NDUFV2P19404 249 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 GDF5P43026 501 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 UBE2KP61086 200 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 SEC61A1P61619 476 aaKnown RBP5.37□□□□□ -1.55
VCAN-201ENST00000265077 GPR50Q13585 617 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 CHRFAM7AQ494W8 412 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 MFSD6LQ8IWD5 586 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 SLC30A7Q8NEW0 376 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 TMEM234Q8WY98 164 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 POM121Q96HA1 1249 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 NSUN5Q96P11 429 aaKnown RBP5.37□□□□□ -1.55
VCAN-201ENST00000265077 CSNK1G3Q9Y6M4 447 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 MED13Q9UHV7 2174 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 ACPPP15309 386 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 TAS2R60P59551 318 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 TOMM34Q15785 309 aaPredicted RBP5.37□□□□□ -1.55
VCAN-201ENST00000265077 OR6V1Q8N148 313 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 DDOQ99489 341 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 CDC6Q99741 560 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 CMKLR1Q99788 373 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 GSKIPQ9P0R6 139 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 KLK4Q9Y5K2 254 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 LOC390937A0A1W2PQ73 354 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 AP4M1O00189 453 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 SLC31A1O15431 190 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 EMC8O43402 210 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 RAD1O60671 282 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 TNFP01375 233 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 FRKP42685 505 aaPredicted RBP5.37□□□□□ -1.55
VCAN-201ENST00000265077 CASP6P55212 293 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 SOHLH1Q5JUK2 328 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 CATSPEREQ5SY80 951 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 FBXO15Q8NCQ5 510 aaPredicted RBP5.37□□□□□ -1.55
VCAN-201ENST00000265077 ZNF384Q8TF68 577 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 C16orf78Q8WTQ4 265 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 XYLT2Q9H1B5 865 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 GORASP2Q9H8Y8 452 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 COL2A1P02458 1487 aaPredicted RBP5.37□□□□□ -1.55
VCAN-201ENST00000265077 ACOT7O00154 380 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 C5AR1P21730 350 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 FXYD6P3P58550 94 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 SELENOWP63302 87 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 DGKZQ13574 1117 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 RNASE10Q5GAN6 216 aaKnown RBP5.37□□□□□ -1.55
VCAN-201ENST00000265077 ZNF440Q8IYI8 595 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 OR10D4PQ8NGN7 298 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 SH3RF2Q8TEC5 729 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 RNF141Q8WVD5 230 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 ZNF689Q96CS4 500 aaPredicted RBP5.37□□□□□ -1.55
VCAN-201ENST00000265077 SCMH1Q96GD3 660 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 TMEM43Q9BTV4 400 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 CICQ96RK0 1608 aaPredicted RBP5.37□□□□□ -1.55
VCAN-201ENST00000265077 COL1A1P02452 1464 aaPredicted RBP5.37□□□□□ -1.55
VCAN-201ENST00000265077 DBX1A6NMT0 343 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 KHNYNO15037 678 aaKnown RBP5.37□□□□□ -1.55
VCAN-201ENST00000265077 CCR6P51684 374 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 CLDN20P56880 219 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 TAP2Q03519 686 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 RELQ04864 619 aaPredicted RBP5.37□□□□□ -1.55
VCAN-201ENST00000265077 SLC14A2Q15849 920 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 ACTBL2Q562R1 376 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 NXNL2Q5VZ03 156 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 SFRP4Q6FHJ7 346 aaPredicted RBP5.37□□□□□ -1.55
VCAN-201ENST00000265077 HORMAD2Q8N7B1 307 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 CLDN22Q8N7P3 220 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 TMEM125Q96AQ2 219 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 B3GAT2Q9NPZ5 323 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 IGSF5Q9NSI5 407 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 LYRM2Q9NU23 88 aaPredicted RBP5.37□□□□□ -1.55
VCAN-201ENST00000265077 LUZP4Q9P127 313 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 BTNL2Q9UIR0 455 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 NDUFS8O00217 210 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 ASGR2P07307 311 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 OR1E2P47887 323 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 MLIPQ5VWP3 458 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 OR8S1Q8NH09 359 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 CYB5D2Q8WUJ1 264 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 NT5C3BQ969T7 300 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 ENKD1Q9H0I2 346 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 DNAJC15Q9Y5T4 150 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 DIRAS3O95661 229 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 RBM39Q14498 530 aaKnown RBP5.37□□□□□ -1.55
VCAN-201ENST00000265077 OVCH2Q7RTZ1 564 aa5.37□□□□□ -1.55
VCAN-201ENST00000265077 CNTN4Q8IWV2 1026 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms