RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.53□□□□□ -1.366e-6■■□□□ 12.4
DEPDC1B-201ENST00000265036 COQ5Q5HYK3 327 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 GGNQ86UU5 652 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 GRAMD2AQ8IUY3 354 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 C9orf106Q8NAJ2 232 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 CCDC197Q8NCU1 140 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 HIPK4Q8NE63 616 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 TNIP2Q8NFZ5 429 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 VANGL1Q8TAA9 524 aaPredicted RBP6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 BBS10Q8TAM1 723 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 RNF217Q8TC41 542 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 ITLN2Q8WWU7 325 aaPredicted RBP6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 DMRTA2Q96SC8 542 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 TTYH2Q9BSA4 534 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 UCK2Q9BZX2 261 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 LAT2Q9GZY6 243 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 MRGBPQ9NV56 204 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 GID8Q9NWU2 228 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 CLEC4AQ9UMR7 237 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 APCP25054 2843 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 A0A0G2JNJ9 132 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 NKX2-6A6NCS4 301 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 CFAP73A6NFT4 308 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 E9PLN8 166 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 M0QX08 132 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 SLC22A2O15244 555 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 CXCL13O43927 109 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 EIF4E2O60573 245 aaKnown RBP6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 WDR1O75083 606 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 GCM2O75603 506 aaPredicted RBP6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 DCTN3O75935 186 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 ACTL6AO96019 429 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 GLI4P10075 376 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 NCK1P16333 377 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 PGCP20142 388 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 MSX1P28360 303 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 ADSLP30566 484 aaPredicted RBP6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 CRYBA2P53672 197 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 PER3P56645 1201 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 BNIP2Q12982 314 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 SNTB1Q13884 538 aaKnown RBP6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 GNA13Q14344 377 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 PON3Q15166 354 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 SGCBQ16585 318 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 DUSP7Q16829 419 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 VMACQ2NL98 169 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 TMEM176BQ3YBM2 270 aaPredicted RBP6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 NHSL2Q5HYW2 709 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 ARMC8Q8IUR7 673 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 P3H2Q8IVL5 708 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 SLC15A3Q8IY34 581 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 OR2T12Q8NG77 320 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 OR8J3Q8NGG0 315 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 OR10D3Q8NH80 312 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 FIG4Q92562 907 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 ZBTB8AQ96BR9 441 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 TAMM41Q96BW9 452 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 INTS12Q96CB8 462 aaKnown RBP6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 CMTM5Q96DZ9 223 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 ZNF583Q96ND8 569 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 VKORC1Q9BQB6 163 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 TMEM38AQ9H6F2 299 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 EFCAB1Q9HAE3 211 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 THUMPD1Q9NXG2 353 aaKnown RBP6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 Q9UFV3 132 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 RNF6Q9Y252 685 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 GPC6Q9Y625 555 aaPredicted RBP6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 V9GYQ6 96 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 A0A0J9YW62 118 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 ZC3H12DA2A288 527 aaKnown RBP6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 CLEC18AA5D8T8 446 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 NTN1O95631 604 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 CLDN1O95832 211 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 CHMP24386 653 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 GRNP28799 593 aaKnown RBP6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 SLC7A1P30825 629 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 GZMMP51124 257 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 RGS8P57771 180 aaPredicted RBP6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 PSME3P61289 254 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 TXNL4AP83876 142 aaKnown RBP6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 LIPEQ05469 1076 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 FOXF2Q12947 444 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 TMEM44Q2T9K0 475 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 RNF220Q5VTB9 566 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 CLEC18BQ6UXF7 455 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 KRT73Q86Y46 540 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 RBM45Q8IUH3 476 aaKnown RBP6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 LACC1Q8IV20 430 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 PM20D2Q8IYS1 436 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 MEIOBQ8N635 442 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 CLEC18CQ8NCF0 446 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 RBM15BQ8NDT2 890 aaKnown RBP6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 ARL5BQ96KC2 179 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 OR5B2Q96R09 309 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 SRXN1Q9BYN0 137 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 BCL2L10Q9HD36 194 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 ADA2Q9NZK5 511 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 EGFL7Q9UHF1 273 aa6.52□□□□□ -1.37
DEPDC1B-201ENST00000265036 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.51□□□□□ -1.37
DEPDC1B-201ENST00000265036 AQP8O94778 261 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms