RNA–Protein interactions for RNA: ENST00000255320.6

HMGB1P5-201, Transcript of high mobility group box 1 pseudogene 5, humanhuman

BASIC

Gene HMGB1P5, Length 642 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P5-201ENST00000255320 WARS2Q9UGM6 360 aaKnown RBP3.18□□□□□ -1.9
HMGB1P5-201ENST00000255320 LCMT1Q9UIC8 334 aa3.18□□□□□ -1.9
HMGB1P5-201ENST00000255320 MOKQ9UQ07 419 aa3.18□□□□□ -1.9
HMGB1P5-201ENST00000255320 SMIM28A0A1B0GU29 152 aa3.17□□□□□ -1.9
HMGB1P5-201ENST00000255320 ZNF208O43345 1280 aa3.17□□□□□ -1.9
HMGB1P5-201ENST00000255320 N4BP1O75113 896 aaKnown RBP3.17□□□□□ -1.9
HMGB1P5-201ENST00000255320 UGT2B17O75795 530 aa3.17□□□□□ -1.9
HMGB1P5-201ENST00000255320 VDAC1P21796 283 aa3.17□□□□□ -1.9
HMGB1P5-201ENST00000255320 CALB2P22676 271 aa3.17□□□□□ -1.9
HMGB1P5-201ENST00000255320 GCKP35557 465 aa3.17□□□□□ -1.9
HMGB1P5-201ENST00000255320 KIR2DS2P43631 304 aa3.17□□□□□ -1.9
HMGB1P5-201ENST00000255320 EFNB2P52799 333 aa3.17□□□□□ -1.9
HMGB1P5-201ENST00000255320 AIF1P55008 147 aa3.17□□□□□ -1.9
HMGB1P5-201ENST00000255320 RPS14P62263 151 aaKnown RBP3.17□□□□□ -1.9
HMGB1P5-201ENST00000255320 TNFRSF17Q02223 184 aa3.17□□□□□ -1.9
HMGB1P5-201ENST00000255320 RIPK1Q13546 671 aa3.17□□□□□ -1.9
HMGB1P5-201ENST00000255320 OR2B11Q5JQS5 317 aa3.17□□□□□ -1.9
HMGB1P5-201ENST00000255320 BEND3Q5T5X7 828 aa3.17□□□□□ -1.9
HMGB1P5-201ENST00000255320 FAF2Q96CS3 445 aa3.17□□□□□ -1.9
HMGB1P5-201ENST00000255320 IL4I1Q96RQ9 567 aa3.17□□□□□ -1.9
HMGB1P5-201ENST00000255320 CCT7Q99832 543 aa3.17□□□□□ -1.9
HMGB1P5-201ENST00000255320 TUBGCP2Q9BSJ2 902 aa3.17□□□□□ -1.9
HMGB1P5-201ENST00000255320 RNF126Q9BV68 326 aa3.17□□□□□ -1.9
HMGB1P5-201ENST00000255320 CAPS2Q9BXY5 557 aa3.17□□□□□ -1.9
HMGB1P5-201ENST00000255320 NAT10Q9H0A0 1025 aaKnown RBP3.17□□□□□ -1.9
HMGB1P5-201ENST00000255320 ZNF385DQ9H6B1 395 aa3.17□□□□□ -1.9
HMGB1P5-201ENST00000255320 VCPKMTQ9H867 229 aa3.17□□□□□ -1.9
HMGB1P5-201ENST00000255320 ZNF702PQ9H963 129 aa3.17□□□□□ -1.9
HMGB1P5-201ENST00000255320 LRRC40Q9H9A6 602 aa3.17□□□□□ -1.9
HMGB1P5-201ENST00000255320 ZNF275Q9NSD4 429 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P5-201ENST00000255320 ERVW-1Q9UQF0 538 aa3.17□□□□□ -1.9
HMGB1P5-201ENST00000255320 CA5BQ9Y2D0 317 aa3.17□□□□□ -1.9
HMGB1P5-201ENST00000255320 IGHV1OR15-1A0A075B7D0 117 aa3.16□□□□□ -1.9
HMGB1P5-201ENST00000255320 KLF18A0A0U1RQI7 1052 aa3.16□□□□□ -1.9
HMGB1P5-201ENST00000255320 F5H6K3 240 aa3.16□□□□□ -1.9
HMGB1P5-201ENST00000255320 WWP2O00308 870 aa3.16□□□□□ -1.9
HMGB1P5-201ENST00000255320 NBR2O15453 112 aa3.16□□□□□ -1.9
HMGB1P5-201ENST00000255320 PRKAB2O43741 272 aa3.16□□□□□ -1.9
HMGB1P5-201ENST00000255320 CXCL13O43927 109 aa3.16□□□□□ -1.9
HMGB1P5-201ENST00000255320 GNA14O95837 355 aa3.16□□□□□ -1.9
HMGB1P5-201ENST00000255320 IGHV3-23P01764 117 aa3.16□□□□□ -1.9
HMGB1P5-201ENST00000255320 P0C879 139 aa3.16□□□□□ -1.9
HMGB1P5-201ENST00000255320 POU2F1P14859 743 aa3.16□□□□□ -1.9
HMGB1P5-201ENST00000255320 IMPDH1P20839 514 aa3.16□□□□□ -1.9
HMGB1P5-201ENST00000255320 FGF9P31371 208 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P5-201ENST00000255320 TAGLN2P37802 199 aaKnown RBP3.16□□□□□ -1.9
HMGB1P5-201ENST00000255320 CCT3P49368 545 aaKnown RBP3.16□□□□□ -1.9
HMGB1P5-201ENST00000255320 TAF6P49848 677 aa3.16□□□□□ -1.9
HMGB1P5-201ENST00000255320 KRTAP10-12P60413 245 aa3.16□□□□□ -1.9
HMGB1P5-201ENST00000255320 KLRC3Q07444 240 aa3.16□□□□□ -1.9
HMGB1P5-201ENST00000255320 EGFEM1PQ0D2K5 195 aa3.16□□□□□ -1.9
HMGB1P5-201ENST00000255320 AANATQ16613 207 aa3.16□□□□□ -1.9
HMGB1P5-201ENST00000255320 KRTAP27-1Q3LI81 207 aa3.16□□□□□ -1.9
HMGB1P5-201ENST00000255320 SFT2D3Q587I9 215 aa3.16□□□□□ -1.9
HMGB1P5-201ENST00000255320 PAGE2BQ5JRK9 111 aa3.16□□□□□ -1.9
HMGB1P5-201ENST00000255320 FRA10AC1Q70Z53 315 aa3.16□□□□□ -1.9
HMGB1P5-201ENST00000255320 APOBEC3FQ8IUX4 373 aaKnown RBP3.16□□□□□ -1.9
HMGB1P5-201ENST00000255320 FBXO16Q8IX29 292 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P5-201ENST00000255320 LYG1Q8N1E2 194 aa3.16□□□□□ -1.9
HMGB1P5-201ENST00000255320 GPD1LQ8N335 351 aa3.16□□□□□ -1.9
HMGB1P5-201ENST00000255320 CADM2Q8N3J6 435 aa3.16□□□□□ -1.9
HMGB1P5-201ENST00000255320 SVOPLQ8N434 492 aa3.16□□□□□ -1.9
HMGB1P5-201ENST00000255320 MFSD9Q8NBP5 474 aa3.16□□□□□ -1.9
HMGB1P5-201ENST00000255320 SLC25A38Q96DW6 304 aa3.16□□□□□ -1.9
HMGB1P5-201ENST00000255320 MS4A14Q96JA4 679 aa3.16□□□□□ -1.9
HMGB1P5-201ENST00000255320 TBX15Q96SF7 602 aa3.16□□□□□ -1.9
HMGB1P5-201ENST00000255320 NPY6RQ99463 290 aa3.16□□□□□ -1.9
HMGB1P5-201ENST00000255320 ZBTB18Q99592 522 aa3.16□□□□□ -1.9
HMGB1P5-201ENST00000255320 PARD6BQ9BYG5 372 aa3.16□□□□□ -1.9
HMGB1P5-201ENST00000255320 Q9H3A6 140 aa3.16□□□□□ -1.9
HMGB1P5-201ENST00000255320 POPDC2Q9HBU9 364 aa3.16□□□□□ -1.9
HMGB1P5-201ENST00000255320 NUDT15Q9NV35 164 aa3.16□□□□□ -1.9
HMGB1P5-201ENST00000255320 VNN3Q9NY84 501 aa3.16□□□□□ -1.9
HMGB1P5-201ENST00000255320 COX16Q9P0S2 106 aa3.16□□□□□ -1.9
HMGB1P5-201ENST00000255320 ONECUT1Q9UBC0 465 aa3.16□□□□□ -1.9
HMGB1P5-201ENST00000255320 KLHL21Q9UJP4 597 aa3.16□□□□□ -1.9
HMGB1P5-201ENST00000255320 CDH9Q9ULB4 789 aa3.16□□□□□ -1.9
HMGB1P5-201ENST00000255320 TRDCB7Z8K6 153 aa3.15□□□□□ -1.91
HMGB1P5-201ENST00000255320 KIF2AO00139 706 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P5-201ENST00000255320 PALMO75781 387 aa3.15□□□□□ -1.91
HMGB1P5-201ENST00000255320 SCGNO76038 276 aa3.15□□□□□ -1.91
HMGB1P5-201ENST00000255320 CCDC166P0CW27 439 aa3.15□□□□□ -1.91
HMGB1P5-201ENST00000255320 DBTP11182 482 aaKnown RBP3.15□□□□□ -1.91
HMGB1P5-201ENST00000255320 NCK1P16333 377 aa3.15□□□□□ -1.91
HMGB1P5-201ENST00000255320 POLR2EP19388 210 aaKnown RBP3.15□□□□□ -1.91
HMGB1P5-201ENST00000255320 EPHX2P34913 555 aa3.15□□□□□ -1.91
HMGB1P5-201ENST00000255320 UGT1A3P35503 534 aa3.15□□□□□ -1.91
HMGB1P5-201ENST00000255320 PTGDSP41222 190 aa3.15□□□□□ -1.91
HMGB1P5-201ENST00000255320 MAP3K8P41279 467 aa3.15□□□□□ -1.91
HMGB1P5-201ENST00000255320 HLCSP50747 726 aa3.15□□□□□ -1.91
HMGB1P5-201ENST00000255320 DAP3P51398 398 aaKnown RBP3.15□□□□□ -1.91
HMGB1P5-201ENST00000255320 RIPK4P57078 832 aa3.15□□□□□ -1.91
HMGB1P5-201ENST00000255320 KRTAP10-6P60371 365 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P5-201ENST00000255320 FGL1Q08830 312 aa3.15□□□□□ -1.91
HMGB1P5-201ENST00000255320 KLRB1Q12918 225 aa3.15□□□□□ -1.91
HMGB1P5-201ENST00000255320 TRIM16LQ309B1 348 aa3.15□□□□□ -1.91
HMGB1P5-201ENST00000255320 PDZK1Q5T2W1 519 aa3.15□□□□□ -1.91
HMGB1P5-201ENST00000255320 GPRC6AQ5T6X5 926 aa3.15□□□□□ -1.91
HMGB1P5-201ENST00000255320 OLFML2AQ68BL7 652 aa3.15□□□□□ -1.91
HMGB1P5-201ENST00000255320 OR4F3Q6IEY1 312 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms