RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 RIT1Q92963 219 aa18.01■□□□□ 0.47
CDC42EP1-201ENST00000249014 PEX11GQ96HA9 241 aa18.01■□□□□ 0.47
CDC42EP1-201ENST00000249014 CTRCQ99895 268 aa18.01■□□□□ 0.47
CDC42EP1-201ENST00000249014 ADGRL4Q9HBW9 690 aa18.01■□□□□ 0.47
CDC42EP1-201ENST00000249014 NEK6Q9HC98 313 aa18.01■□□□□ 0.47
CDC42EP1-201ENST00000249014 MCCC2Q9HCC0 563 aa18.01■□□□□ 0.47
CDC42EP1-201ENST00000249014 B3GAT2Q9NPZ5 323 aa18.01■□□□□ 0.47
CDC42EP1-201ENST00000249014 ZMIZ1Q9ULJ6 1067 aa18.01■□□□□ 0.47
CDC42EP1-201ENST00000249014 PRUNE2Q8WUY3 3088 aa18.01■□□□□ 0.47
CDC42EP1-201ENST00000249014 HTR3EA5X5Y0 456 aa18.01■□□□□ 0.47
CDC42EP1-201ENST00000249014 SLC9B1P1A6NJY1 282 aa18.01■□□□□ 0.47
CDC42EP1-201ENST00000249014 CSF2P04141 144 aa18.01■□□□□ 0.47
CDC42EP1-201ENST00000249014 GYPBP06028 91 aa18.01■□□□□ 0.47
CDC42EP1-201ENST00000249014 CCR5P51681 352 aa18.01■□□□□ 0.47
CDC42EP1-201ENST00000249014 MAT1AQ00266 395 aaKnown RBP18.01■□□□□ 0.47
CDC42EP1-201ENST00000249014 ERV3-1Q14264 604 aa18.01■□□□□ 0.47
CDC42EP1-201ENST00000249014 ALG10BQ5I7T1 473 aa18.01■□□□□ 0.47
CDC42EP1-201ENST00000249014 ATAD3CQ5T2N8 411 aa18.01■□□□□ 0.47
CDC42EP1-201ENST00000249014 NPSR1Q6W5P4 371 aa18.01■□□□□ 0.47
CDC42EP1-201ENST00000249014 UTS2BQ765I0 119 aa18.01■□□□□ 0.47
CDC42EP1-201ENST00000249014 OR5W2Q8NH69 310 aa18.01■□□□□ 0.47
CDC42EP1-201ENST00000249014 OR4C6Q8NH72 309 aa18.01■□□□□ 0.47
CDC42EP1-201ENST00000249014 VSTM2LQ96N03 204 aa18.01■□□□□ 0.47
CDC42EP1-201ENST00000249014 GPR174Q9BXC1 333 aa18.01■□□□□ 0.47
CDC42EP1-201ENST00000249014 RIIAD1A6NNX1 92 aa18■□□□□ 0.47
CDC42EP1-201ENST00000249014 B4DXG7 233 aa18■□□□□ 0.47
CDC42EP1-201ENST00000249014 FOXS1O43638 330 aa18■□□□□ 0.47
CDC42EP1-201ENST00000249014 SBK2P0C263 348 aa18■□□□□ 0.47
CDC42EP1-201ENST00000249014 CHRNB1P11230 501 aa18■□□□□ 0.47
CDC42EP1-201ENST00000249014 KIR2DL3P43628 341 aa18■□□□□ 0.47
CDC42EP1-201ENST00000249014 ZNF85Q03923 595 aa18■□□□□ 0.47
CDC42EP1-201ENST00000249014 PRTGQ2VWP7 1150 aa18■□□□□ 0.47
CDC42EP1-201ENST00000249014 RDH10Q8IZV5 341 aa18■□□□□ 0.47
CDC42EP1-201ENST00000249014 Q8N402 240 aa18■□□□□ 0.47
CDC42EP1-201ENST00000249014 SCAIQ8N9R8 606 aa18■□□□□ 0.47
CDC42EP1-201ENST00000249014 RCBTB1Q8NDN9 531 aa18■□□□□ 0.47
CDC42EP1-201ENST00000249014 SPACA7Q96KW9 195 aa18■□□□□ 0.47
CDC42EP1-201ENST00000249014 TRIM36Q9NQ86 728 aa18■□□□□ 0.47
CDC42EP1-201ENST00000249014 ZNF221Q9UK13 617 aa18■□□□□ 0.47
CDC42EP1-201ENST00000249014 C2CD4DB7Z1M9 353 aa18■□□□□ 0.47
CDC42EP1-201ENST00000249014 SLC2A2P11168 524 aaPredicted RBP18■□□□□ 0.47
CDC42EP1-201ENST00000249014 MAZP56270 477 aaKnown RBP18■□□□□ 0.47
CDC42EP1-201ENST00000249014 E2F1Q01094 437 aa18■□□□□ 0.47
CDC42EP1-201ENST00000249014 ZNHIT3Q15649 155 aaPredicted RBP18■□□□□ 0.47
CDC42EP1-201ENST00000249014 NNATQ16517 81 aa18■□□□□ 0.47
CDC42EP1-201ENST00000249014 FAM27D1Q5T7N8 215 aa18■□□□□ 0.47
CDC42EP1-201ENST00000249014 ARL9Q6T311 187 aa18■□□□□ 0.47
CDC42EP1-201ENST00000249014 LSMEM1Q8N8F7 131 aa18■□□□□ 0.47
CDC42EP1-201ENST00000249014 RBM18Q96H35 190 aaKnown RBP18■□□□□ 0.47
CDC42EP1-201ENST00000249014 ZNF486Q96H40 463 aaPredicted RBP18■□□□□ 0.47
CDC42EP1-201ENST00000249014 AHCYL2Q96HN2 611 aaKnown RBP18■□□□□ 0.47
CDC42EP1-201ENST00000249014 ST6GAL2Q96JF0 529 aa18■□□□□ 0.47
CDC42EP1-201ENST00000249014 DEPDC7Q96QD5 511 aa18■□□□□ 0.47
CDC42EP1-201ENST00000249014 LRRC61Q9BV99 259 aa18■□□□□ 0.47
CDC42EP1-201ENST00000249014 CLDN16Q9Y5I7 305 aa18■□□□□ 0.47
CDC42EP1-201ENST00000249014 HEATR5AQ86XA9 2040 aa17.99■□□□□ 0.47
CDC42EP1-201ENST00000249014 A8MV72 311 aaPredicted RBP17.99■□□□□ 0.47
CDC42EP1-201ENST00000249014 GNB5O14775 395 aa17.99■□□□□ 0.47
CDC42EP1-201ENST00000249014 IGLV3-19P01714 112 aa17.99■□□□□ 0.47
CDC42EP1-201ENST00000249014 HLA-DQB1P01920 261 aa17.99■□□□□ 0.47
CDC42EP1-201ENST00000249014 KRT8P05787 483 aa17.99■□□□□ 0.47
CDC42EP1-201ENST00000249014 PEPDP12955 493 aa17.99■□□□□ 0.47
CDC42EP1-201ENST00000249014 ZNF3P17036 446 aa17.99■□□□□ 0.47
CDC42EP1-201ENST00000249014 BTG2P78543 158 aa17.99■□□□□ 0.47
CDC42EP1-201ENST00000249014 IFITM2Q01629 132 aa17.99■□□□□ 0.47
CDC42EP1-201ENST00000249014 CRYZQ08257 329 aaKnown RBP17.99■□□□□ 0.47
CDC42EP1-201ENST00000249014 STX4Q12846 297 aa17.99■□□□□ 0.47
CDC42EP1-201ENST00000249014 IL18Q14116 193 aa17.99■□□□□ 0.47
CDC42EP1-201ENST00000249014 NDUFAF6Q330K2 333 aa17.99■□□□□ 0.47
CDC42EP1-201ENST00000249014 LINC00114Q6XXX2 140 aa17.99■□□□□ 0.47
CDC42EP1-201ENST00000249014 RTL4Q6ZR62 310 aa17.99■□□□□ 0.47
CDC42EP1-201ENST00000249014 CADM2Q8N3J6 435 aa17.99■□□□□ 0.47
CDC42EP1-201ENST00000249014 C4orf36Q96KX1 117 aa17.99■□□□□ 0.47
CDC42EP1-201ENST00000249014 KCNN2Q9H2S1 579 aa17.99■□□□□ 0.47
CDC42EP1-201ENST00000249014 INPP5EQ9NRR6 644 aa17.99■□□□□ 0.47
CDC42EP1-201ENST00000249014 A0A0B4J293 547 aa17.98■□□□□ 0.47
CDC42EP1-201ENST00000249014 MT-ND5P03915 603 aa17.98■□□□□ 0.47
CDC42EP1-201ENST00000249014 CFL1P23528 166 aaKnown RBP17.98■□□□□ 0.47
CDC42EP1-201ENST00000249014 SHC1P29353 583 aa17.98■□□□□ 0.47
CDC42EP1-201ENST00000249014 RBM34P42696 430 aaKnown RBP17.98■□□□□ 0.47
CDC42EP1-201ENST00000249014 RPS5P46782 204 aaKnown RBP17.98■□□□□ 0.47
CDC42EP1-201ENST00000249014 MTNR1BP49286 362 aa17.98■□□□□ 0.47
CDC42EP1-201ENST00000249014 FGFBP1Q14512 234 aa17.98■□□□□ 0.47
CDC42EP1-201ENST00000249014 LCN1P1Q5VSP4 162 aa17.98■□□□□ 0.47
CDC42EP1-201ENST00000249014 MZT2AQ6P582 158 aa17.98■□□□□ 0.47
CDC42EP1-201ENST00000249014 METAP1DQ6UB28 335 aaPredicted RBP17.98■□□□□ 0.47
CDC42EP1-201ENST00000249014 KIRREL2Q6UWL6 708 aa17.98■□□□□ 0.47
CDC42EP1-201ENST00000249014 RPTNQ6XPR3 784 aa17.98■□□□□ 0.47
CDC42EP1-201ENST00000249014 SSX6Q7RTT6 188 aa17.98■□□□□ 0.47
CDC42EP1-201ENST00000249014 C17orf47Q8NEP4 570 aa17.98■□□□□ 0.47
CDC42EP1-201ENST00000249014 SMPDL3BQ92485 455 aa17.98■□□□□ 0.47
CDC42EP1-201ENST00000249014 RNF31Q96EP0 1072 aa17.98■□□□□ 0.47
CDC42EP1-201ENST00000249014 NDC1Q9BTX1 674 aa17.98■□□□□ 0.47
CDC42EP1-201ENST00000249014 TRIM2Q9C040 744 aa17.98■□□□□ 0.47
CDC42EP1-201ENST00000249014 C2orf42Q9NWW7 574 aa17.98■□□□□ 0.47
CDC42EP1-201ENST00000249014 N6AMT1Q9Y5N5 214 aa17.98■□□□□ 0.47
CDC42EP1-201ENST00000249014 THADAQ6YHU6 1953 aa17.98■□□□□ 0.47
CDC42EP1-201ENST00000249014 NPIPB9F8W1W9 429 aa17.98■□□□□ 0.47
CDC42EP1-201ENST00000249014 PLPP2O43688 288 aa17.98■□□□□ 0.47
CDC42EP1-201ENST00000249014 RNH1P13489 461 aaKnown RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms