RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 WDR4P57081 412 aaKnown RBP10.58□□□□□ -0.72
RFPL3-201ENST00000249007 ESRRGP62508 458 aa10.58□□□□□ -0.72
RFPL3-201ENST00000249007 ITGADQ13349 1161 aa10.58□□□□□ -0.72
RFPL3-201ENST00000249007 PPA1Q15181 289 aa10.58□□□□□ -0.72
RFPL3-201ENST00000249007 PRICKLE4Q2TBC4 344 aa10.58□□□□□ -0.72
RFPL3-201ENST00000249007 ZFP1Q6P2D0 407 aa10.58□□□□□ -0.72
RFPL3-201ENST00000249007 TTC27Q6P3X3 843 aa10.58□□□□□ -0.72
RFPL3-201ENST00000249007 SLC22A25Q6T423 547 aa10.58□□□□□ -0.72
RFPL3-201ENST00000249007 TREML4Q6UXN2 200 aa10.58□□□□□ -0.72
RFPL3-201ENST00000249007 TFAP2EQ6VUC0 442 aa10.58□□□□□ -0.72
RFPL3-201ENST00000249007 LARP4Q71RC2 724 aaKnown RBP eCLIP10.58□□□□□ -0.72
RFPL3-201ENST00000249007 MTDHQ86UE4 582 aaKnown RBP10.58□□□□□ -0.72
RFPL3-201ENST00000249007 ANKRD42Q8N9B4 389 aa10.58□□□□□ -0.72
RFPL3-201ENST00000249007 TOR1AIP2Q8NFQ8 470 aa10.58□□□□□ -0.72
RFPL3-201ENST00000249007 RNF138Q8WVD3 245 aa10.58□□□□□ -0.72
RFPL3-201ENST00000249007 ANKRD49Q8WVL7 239 aa10.58□□□□□ -0.72
RFPL3-201ENST00000249007 TRIM63Q969Q1 353 aa10.58□□□□□ -0.72
RFPL3-201ENST00000249007 MTERF1Q99551 399 aaKnown RBP10.58□□□□□ -0.72
RFPL3-201ENST00000249007 MROQ9BYG7 248 aa10.58□□□□□ -0.72
RFPL3-201ENST00000249007 METTL17Q9H7H0 456 aaPredicted RBP10.58□□□□□ -0.72
RFPL3-201ENST00000249007 PAQR5Q9NXK6 330 aaPredicted RBP10.58□□□□□ -0.72
RFPL3-201ENST00000249007 MED11Q9P086 117 aa10.58□□□□□ -0.72
RFPL3-201ENST00000249007 PRODH2Q9UF12 536 aa10.58□□□□□ -0.72
RFPL3-201ENST00000249007 TSPAN2O60636 221 aa10.57□□□□□ -0.72
RFPL3-201ENST00000249007 RGS9O75916 674 aaPredicted RBP10.57□□□□□ -0.72
RFPL3-201ENST00000249007 CBX7O95931 251 aa10.57□□□□□ -0.72
RFPL3-201ENST00000249007 ADAP00813 363 aa10.57□□□□□ -0.72
RFPL3-201ENST00000249007 GBAP04062 536 aa10.57□□□□□ -0.72
RFPL3-201ENST00000249007 BSGP35613 385 aa10.57□□□□□ -0.72
RFPL3-201ENST00000249007 PIK3CBP42338 1070 aa10.57□□□□□ -0.72
RFPL3-201ENST00000249007 FABP6P51161 128 aa10.57□□□□□ -0.72
RFPL3-201ENST00000249007 BTKQ06187 659 aa10.57□□□□□ -0.72
RFPL3-201ENST00000249007 MGAT2Q10469 447 aa10.57□□□□□ -0.72
RFPL3-201ENST00000249007 GALNT1Q10472 559 aaPredicted RBP10.57□□□□□ -0.72
RFPL3-201ENST00000249007 MAP4K2Q12851 820 aa10.57□□□□□ -0.72
RFPL3-201ENST00000249007 STX5Q13190 355 aa10.57□□□□□ -0.72
RFPL3-201ENST00000249007 MPP2Q14168 576 aa10.57□□□□□ -0.72
RFPL3-201ENST00000249007 CARTPTQ16568 116 aa10.57□□□□□ -0.72
RFPL3-201ENST00000249007 AWAT1Q58HT5 328 aa10.57□□□□□ -0.72
RFPL3-201ENST00000249007 SULT1C3Q6IMI6 304 aa10.57□□□□□ -0.72
RFPL3-201ENST00000249007 BHLHA15Q7RTS1 189 aaPredicted RBP10.57□□□□□ -0.72
RFPL3-201ENST00000249007 TRABD2AQ86V40 505 aa10.57□□□□□ -0.72
RFPL3-201ENST00000249007 OR52R1Q8NGF1 315 aa10.57□□□□□ -0.72
RFPL3-201ENST00000249007 MGARPQ8TDB4 240 aa10.57□□□□□ -0.72
RFPL3-201ENST00000249007 ZNF418Q8TF45 676 aaPredicted RBP10.57□□□□□ -0.72
RFPL3-201ENST00000249007 CDKL2Q92772 493 aa10.57□□□□□ -0.72
RFPL3-201ENST00000249007 MUCL1Q96DR8 90 aa10.57□□□□□ -0.72
RFPL3-201ENST00000249007 C1GALT1C1Q96EU7 318 aa10.57□□□□□ -0.72
RFPL3-201ENST00000249007 FOXN4Q96NZ1 517 aa10.57□□□□□ -0.72
RFPL3-201ENST00000249007 CDC42EP4Q9H3Q1 356 aaKnown RBP10.57□□□□□ -0.72
RFPL3-201ENST00000249007 MAT2BQ9NZL9 334 aa10.57□□□□□ -0.72
RFPL3-201ENST00000249007 ARMCX1Q9P291 453 aa10.57□□□□□ -0.72
RFPL3-201ENST00000249007 TAGLN3Q9UI15 199 aa10.57□□□□□ -0.72
RFPL3-201ENST00000249007 GPR55Q9Y2T6 319 aaPredicted RBP10.57□□□□□ -0.72
RFPL3-201ENST00000249007 FKBP7Q9Y680 259 aa10.57□□□□□ -0.72
RFPL3-201ENST00000249007 HEATR1Q9H583 2144 aaKnown RBP10.56□□□□□ -0.72
RFPL3-201ENST00000249007 SMAD9O15198 467 aaKnown RBP10.56□□□□□ -0.72
RFPL3-201ENST00000249007 CXCL13O43927 109 aa10.56□□□□□ -0.72
RFPL3-201ENST00000249007 KLHL2O95198 593 aa10.56□□□□□ -0.72
RFPL3-201ENST00000249007 CHEK2O96017 543 aa10.56□□□□□ -0.72
RFPL3-201ENST00000249007 EVI2BP34910 448 aa10.56□□□□□ -0.72
RFPL3-201ENST00000249007 EMDP50402 254 aa10.56□□□□□ -0.72
RFPL3-201ENST00000249007 CHRNB3Q05901 458 aa10.56□□□□□ -0.72
RFPL3-201ENST00000249007 LGALS3BPQ08380 585 aa10.56□□□□□ -0.72
RFPL3-201ENST00000249007 KCNJ8Q15842 424 aa10.56□□□□□ -0.72
RFPL3-201ENST00000249007 TMEM201Q5SNT2 666 aa10.56□□□□□ -0.72
RFPL3-201ENST00000249007 TEDDM1Q5T9Z0 273 aa10.56□□□□□ -0.72
RFPL3-201ENST00000249007 LGSNQ5TDP6 509 aa10.56□□□□□ -0.72
RFPL3-201ENST00000249007 C1orf146Q5VVC0 180 aa10.56□□□□□ -0.72
RFPL3-201ENST00000249007 GTF2IRD2BQ6EKJ0 949 aa10.56□□□□□ -0.72
RFPL3-201ENST00000249007 SHISA2Q6UWI4 295 aa10.56□□□□□ -0.72
RFPL3-201ENST00000249007 Q6ZSR9 355 aa10.56□□□□□ -0.72
RFPL3-201ENST00000249007 GALNT10Q86SR1 603 aa10.56□□□□□ -0.72
RFPL3-201ENST00000249007 GTF2IRD2Q86UP8 949 aa10.56□□□□□ -0.72
RFPL3-201ENST00000249007 NUDT13Q86X67 352 aa10.56□□□□□ -0.72
RFPL3-201ENST00000249007 LSMEM1Q8N8F7 131 aa10.56□□□□□ -0.72
RFPL3-201ENST00000249007 GRK7Q8WTQ7 553 aa10.56□□□□□ -0.72
RFPL3-201ENST00000249007 CERS2Q96G23 380 aa10.56□□□□□ -0.72
RFPL3-201ENST00000249007 ARL8BQ9NVJ2 186 aa10.56□□□□□ -0.72
RFPL3-201ENST00000249007 NPAP1Q9NZP6 1156 aa10.56□□□□□ -0.72
RFPL3-201ENST00000249007 ZNF639Q9UID6 485 aa10.56□□□□□ -0.72
RFPL3-201ENST00000249007 SNX24Q9Y343 169 aa10.56□□□□□ -0.72
RFPL3-201ENST00000249007 DTNAQ9Y4J8 743 aa10.56□□□□□ -0.72
RFPL3-201ENST00000249007 PCDHGB1Q9Y5G3 927 aa10.56□□□□□ -0.72
RFPL3-201ENST00000249007 PMF1-BGLAPU3KQ54 211 aa10.56□□□□□ -0.72
RFPL3-201ENST00000249007 LOC390937A0A1W2PQ73 354 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 SHISA8B8ZZ34 492 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 TRIM77I1YAP6 450 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 PGM3O95394 542 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 ATP1B1P05026 303 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 CTRB1P17538 263 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 PRKACBP22694 351 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 PTX3P26022 381 aaPredicted RBP10.55□□□□□ -0.72
RFPL3-201ENST00000249007 ENTPD1P49961 510 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 PNLIPRP2P54317 469 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 MRPS22P82650 360 aaKnown RBP10.55□□□□□ -0.72
RFPL3-201ENST00000249007 STX3Q13277 289 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 SCGB2A2Q13296 93 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 OXA1LQ15070 435 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 GLYR1Q49A26 553 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms