RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 GMFGO60234 142 aa17.12■□□□□ 0.33
TNFSF9-201ENST00000245817 ZNF354AO60765 605 aaPredicted RBP17.12■□□□□ 0.33
TNFSF9-201ENST00000245817 ITGA10O75578 1167 aa17.12■□□□□ 0.33
TNFSF9-201ENST00000245817 IGFBP1P08833 259 aaPredicted RBP17.12■□□□□ 0.33
TNFSF9-201ENST00000245817 CRHBPP24387 322 aa17.12■□□□□ 0.33
TNFSF9-201ENST00000245817 CD82P27701 267 aa17.12■□□□□ 0.33
TNFSF9-201ENST00000245817 FMO3P31513 532 aa17.12■□□□□ 0.33
TNFSF9-201ENST00000245817 HLCSP50747 726 aa17.12■□□□□ 0.33
TNFSF9-201ENST00000245817 P2RX1P51575 399 aa17.12■□□□□ 0.33
TNFSF9-201ENST00000245817 TUBA4AP68366 448 aa17.12■□□□□ 0.33
TNFSF9-201ENST00000245817 C17orf67Q0P5P2 114 aa17.12■□□□□ 0.33
TNFSF9-201ENST00000245817 SLX4IPQ5VYV7 408 aa17.12■□□□□ 0.33
TNFSF9-201ENST00000245817 OPN5Q6U736 354 aa17.12■□□□□ 0.33
TNFSF9-201ENST00000245817 RAB43Q86YS6 212 aa17.12■□□□□ 0.33
TNFSF9-201ENST00000245817 GALNT15Q8N3T1 639 aa17.12■□□□□ 0.33
TNFSF9-201ENST00000245817 OR5W2Q8NH69 310 aa17.12■□□□□ 0.33
TNFSF9-201ENST00000245817 B4GALNT2Q8NHY0 566 aa17.12■□□□□ 0.33
TNFSF9-201ENST00000245817 DUSP19Q8WTR2 217 aa17.12■□□□□ 0.33
TNFSF9-201ENST00000245817 HGDQ93099 445 aa17.12■□□□□ 0.33
TNFSF9-201ENST00000245817 UBE2FQ969M7 185 aa17.12■□□□□ 0.33
TNFSF9-201ENST00000245817 C3orf49Q96BT1 292 aa17.12■□□□□ 0.33
TNFSF9-201ENST00000245817 PRRG3Q9BZD7 231 aa17.12■□□□□ 0.33
TNFSF9-201ENST00000245817 DPH1Q9BZG8 443 aa17.12■□□□□ 0.33
TNFSF9-201ENST00000245817 SDHAF3Q9NRP4 125 aa17.12■□□□□ 0.33
TNFSF9-201ENST00000245817 KLRF1Q9NZS2 232 aa17.12■□□□□ 0.33
TNFSF9-201ENST00000245817 FBXL4Q9UKA2 621 aa17.12■□□□□ 0.33
TNFSF9-201ENST00000245817 TP53I11O14683 189 aa17.11■□□□□ 0.33
TNFSF9-201ENST00000245817 GNB5O14775 395 aa17.11■□□□□ 0.33
TNFSF9-201ENST00000245817 CELA2AP08217 269 aa17.11■□□□□ 0.33
TNFSF9-201ENST00000245817 FBXO45P0C2W1 286 aa17.11■□□□□ 0.33
TNFSF9-201ENST00000245817 SAGP10523 405 aaPredicted RBP17.11■□□□□ 0.33
TNFSF9-201ENST00000245817 RPL5P46777 297 aaKnown RBP17.11■□□□□ 0.33
TNFSF9-201ENST00000245817 GIPRP48546 466 aa17.11■□□□□ 0.33
TNFSF9-201ENST00000245817 GTF2A1P52655 376 aaPredicted RBP17.11■□□□□ 0.33
TNFSF9-201ENST00000245817 CDH15P55291 814 aa17.11■□□□□ 0.33
TNFSF9-201ENST00000245817 APOFQ13790 326 aa17.11■□□□□ 0.33
TNFSF9-201ENST00000245817 GINS1Q14691 196 aa17.11■□□□□ 0.33
TNFSF9-201ENST00000245817 BROXQ5VW32 411 aa17.11■□□□□ 0.33
TNFSF9-201ENST00000245817 IL22RA1Q8N6P7 574 aa17.11■□□□□ 0.33
TNFSF9-201ENST00000245817 RHOXF1Q8NHV9 184 aa17.11■□□□□ 0.33
TNFSF9-201ENST00000245817 ZNF566Q969W8 418 aa17.11■□□□□ 0.33
TNFSF9-201ENST00000245817 SPACA9Q96E40 222 aaPredicted RBP17.11■□□□□ 0.33
TNFSF9-201ENST00000245817 RTN4RQ9BZR6 473 aa17.11■□□□□ 0.33
TNFSF9-201ENST00000245817 DSN1Q9H410 356 aa17.11■□□□□ 0.33
TNFSF9-201ENST00000245817 CDCP1Q9H5V8 836 aa17.11■□□□□ 0.33
TNFSF9-201ENST00000245817 EGLN3Q9H6Z9 239 aa17.11■□□□□ 0.33
TNFSF9-201ENST00000245817 METTL7AQ9H8H3 244 aa17.11■□□□□ 0.33
TNFSF9-201ENST00000245817 RYDENQ9NUL5 291 aaKnown RBP17.11■□□□□ 0.33
TNFSF9-201ENST00000245817 TBC1D23Q9NUY8 699 aa17.11■□□□□ 0.33
TNFSF9-201ENST00000245817 DPPA5A6NC42 116 aa17.1■□□□□ 0.33
TNFSF9-201ENST00000245817 EFCAB9A8MZ26 197 aa17.1■□□□□ 0.33
TNFSF9-201ENST00000245817 KLF4O43474 513 aa17.1■□□□□ 0.33
TNFSF9-201ENST00000245817 TP53P04637 393 aaPredicted RBP17.1■□□□□ 0.33
TNFSF9-201ENST00000245817 GP1BBP13224 206 aa17.1■□□□□ 0.33
TNFSF9-201ENST00000245817 SLC1A3P43003 542 aa17.1■□□□□ 0.33
TNFSF9-201ENST00000245817 NR1H2P55055 460 aa17.1■□□□□ 0.33
TNFSF9-201ENST00000245817 CTBP2P56545 445 aa17.1■□□□□ 0.33
TNFSF9-201ENST00000245817 GABARAPL2P60520 117 aa17.1■□□□□ 0.33
TNFSF9-201ENST00000245817 CRYZQ08257 329 aaKnown RBP17.1■□□□□ 0.33
TNFSF9-201ENST00000245817 NTRK2Q16620 822 aa17.1■□□□□ 0.33
TNFSF9-201ENST00000245817 SLC27A4Q6P1M0 643 aa17.1■□□□□ 0.33
TNFSF9-201ENST00000245817 LINC00114Q6XXX2 140 aa17.1■□□□□ 0.33
TNFSF9-201ENST00000245817 TMPRSS11FQ6ZWK6 438 aa17.1■□□□□ 0.33
TNFSF9-201ENST00000245817 RPS19BP1Q86WX3 136 aaKnown RBP17.1■□□□□ 0.33
TNFSF9-201ENST00000245817 TRUB1Q8WWH5 349 aaKnown RBP17.1■□□□□ 0.33
TNFSF9-201ENST00000245817 ASB15Q8WXK1 588 aa17.1■□□□□ 0.33
TNFSF9-201ENST00000245817 ZNF426Q9BUY5 554 aa17.1■□□□□ 0.33
TNFSF9-201ENST00000245817 HHATLQ9HCP6 504 aa17.1■□□□□ 0.33
TNFSF9-201ENST00000245817 ATP13A2Q9NQ11 1180 aa17.1■□□□□ 0.33
TNFSF9-201ENST00000245817 CLN6Q9NWW5 311 aa17.1■□□□□ 0.33
TNFSF9-201ENST00000245817 P4HTMQ9NXG6 502 aa17.1■□□□□ 0.33
TNFSF9-201ENST00000245817 ICAM5Q9UMF0 924 aa17.1■□□□□ 0.33
TNFSF9-201ENST00000245817 TRIM64A6NGJ6 449 aa17.1■□□□□ 0.33
TNFSF9-201ENST00000245817 PTGES3LE9PB15 166 aa17.1■□□□□ 0.33
TNFSF9-201ENST00000245817 FAM20BO75063 409 aa17.1■□□□□ 0.33
TNFSF9-201ENST00000245817 BMP7P18075 431 aa17.1■□□□□ 0.33
TNFSF9-201ENST00000245817 MAKP20794 623 aa17.1■□□□□ 0.33
TNFSF9-201ENST00000245817 SSR4P51571 173 aa17.1■□□□□ 0.33
TNFSF9-201ENST00000245817 TEKQ02763 1124 aa17.1■□□□□ 0.33
TNFSF9-201ENST00000245817 RPL13AP3Q6NVV1 102 aa17.1■□□□□ 0.33
TNFSF9-201ENST00000245817 KIF18BQ86Y91 864 aa17.1■□□□□ 0.33
TNFSF9-201ENST00000245817 DND1Q8IYX4 353 aaKnown RBP17.1■□□□□ 0.33
TNFSF9-201ENST00000245817 OR52L1Q8NGH7 329 aa17.1■□□□□ 0.33
TNFSF9-201ENST00000245817 SLC38A2Q96QD8 506 aa17.1■□□□□ 0.33
TNFSF9-201ENST00000245817 TSSK6Q9BXA6 273 aa17.1■□□□□ 0.33
TNFSF9-201ENST00000245817 SLC19A3Q9BZV2 496 aa17.1■□□□□ 0.33
TNFSF9-201ENST00000245817 MEPEQ9NQ76 525 aaPredicted RBP17.1■□□□□ 0.33
TNFSF9-201ENST00000245817 C20orf141Q9NUB4 165 aa17.1■□□□□ 0.33
TNFSF9-201ENST00000245817 IL20Q9NYY1 176 aa17.1■□□□□ 0.33
TNFSF9-201ENST00000245817 TVP23BQ9NYZ1 205 aa17.1■□□□□ 0.33
TNFSF9-201ENST00000245817 AASSQ9UDR5 926 aa17.1■□□□□ 0.33
TNFSF9-201ENST00000245817 CDH10Q9Y6N8 788 aa17.1■□□□□ 0.33
TNFSF9-201ENST00000245817 DCHS1Q96JQ0 3298 aa17.1■□□□□ 0.33
TNFSF9-201ENST00000245817 LOC101059948A0A1B0GTJ6 334 aa17.09■□□□□ 0.33
TNFSF9-201ENST00000245817 HTR3EA5X5Y0 456 aa17.09■□□□□ 0.33
TNFSF9-201ENST00000245817 CDC42EP2O14613 210 aa17.09■□□□□ 0.33
TNFSF9-201ENST00000245817 RCBTB2O95199 551 aa17.09■□□□□ 0.33
TNFSF9-201ENST00000245817 HOXD11P31277 338 aaPredicted RBP17.09■□□□□ 0.33
TNFSF9-201ENST00000245817 SOX3P41225 446 aa17.09■□□□□ 0.33
TNFSF9-201ENST00000245817 CDK5Q00535 292 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms