RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 DCAF12L2Q5VW00 463 aa13.07□□□□□ -0.32
SF1-201ENST00000227503 ZNF660Q6AZW8 331 aaPredicted RBP13.07□□□□□ -0.32
SF1-201ENST00000227503 OR7E24Q6IFN5 339 aa13.07□□□□□ -0.32
SF1-201ENST00000227503 HEPHL1Q6MZM0 1159 aa13.07□□□□□ -0.32
SF1-201ENST00000227503 GSG1LQ6UXU4 331 aa13.07□□□□□ -0.32
SF1-201ENST00000227503 FAM129CQ86XR2 697 aa13.07□□□□□ -0.32
SF1-201ENST00000227503 BPIFCQ8NFQ6 507 aa13.07□□□□□ -0.32
SF1-201ENST00000227503 ZNF671Q8TAW3 534 aa13.07□□□□□ -0.32
SF1-201ENST00000227503 SAMD8Q96LT4 415 aa13.07□□□□□ -0.32
SF1-201ENST00000227503 NKX6-2Q9C056 277 aaPredicted RBP13.07□□□□□ -0.32
SF1-201ENST00000227503 ZDHHC5Q9C0B5 715 aa13.07□□□□□ -0.32
SF1-201ENST00000227503 ENKD1Q9H0I2 346 aa13.07□□□□□ -0.32
SF1-201ENST00000227503 NOX3Q9HBY0 568 aa13.07□□□□□ -0.32
SF1-201ENST00000227503 TBX21Q9UL17 535 aa13.07□□□□□ -0.32
SF1-201ENST00000227503 MTCL1Q9Y4B5 1905 aaKnown RBP13.07□□□□□ -0.32
SF1-201ENST00000227503 CARNS1A5YM72 827 aa13.07□□□□□ -0.32
SF1-201ENST00000227503 H0YC42 278 aa13.07□□□□□ -0.32
SF1-201ENST00000227503 PLPP1O14494 284 aa13.07□□□□□ -0.32
SF1-201ENST00000227503 GALR3O60755 368 aaPredicted RBP13.07□□□□□ -0.32
SF1-201ENST00000227503 PAPLNO95428 1278 aa13.07□□□□□ -0.32
SF1-201ENST00000227503 F12P00748 615 aaPredicted RBP13.07□□□□□ -0.32
SF1-201ENST00000227503 IGHA1P01876 353 aa13.07□□□□□ -0.32
SF1-201ENST00000227503 GYPBP06028 91 aa13.07□□□□□ -0.32
SF1-201ENST00000227503 RB1P06400 928 aa13.07□□□□□ -0.32
SF1-201ENST00000227503 ZNF35P13682 527 aa13.07□□□□□ -0.32
SF1-201ENST00000227503 H2BFSP57053 126 aa13.07□□□□□ -0.32
SF1-201ENST00000227503 HTRA3P83110 453 aa13.07□□□□□ -0.32
SF1-201ENST00000227503 LGALS3BPQ08380 585 aa13.07□□□□□ -0.32
SF1-201ENST00000227503 STPG1Q5TH74 334 aa13.07□□□□□ -0.32
SF1-201ENST00000227503 SETD7Q8WTS6 366 aaKnown RBP13.07□□□□□ -0.32
SF1-201ENST00000227503 UBE2E3Q969T4 207 aa13.07□□□□□ -0.32
SF1-201ENST00000227503 OR51V1Q9H2C8 321 aa13.07□□□□□ -0.32
SF1-201ENST00000227503 FKRPQ9H9S5 495 aa13.07□□□□□ -0.32
SF1-201ENST00000227503 SIRT3Q9NTG7 399 aaPredicted RBP13.07□□□□□ -0.32
SF1-201ENST00000227503 SAGE1Q9NXZ1 904 aa13.07□□□□□ -0.32
SF1-201ENST00000227503 MARK1Q9P0L2 795 aa13.07□□□□□ -0.32
SF1-201ENST00000227503 KCNE3Q9Y6H6 103 aa13.07□□□□□ -0.32
SF1-201ENST00000227503 DAPL1A0PJW8 107 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 PRSS44E7EML9 344 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 H7C2Y5 167 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 ADH1AP07327 375 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 CHRM4P08173 479 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 DCTDP32321 178 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 TRHRP34981 398 aaPredicted RBP13.06□□□□□ -0.32
SF1-201ENST00000227503 SMIM11AP58511 58 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 ACSM3Q53FZ2 586 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 PRAMEF14Q5SWL7 426 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 HES5Q5TA89 166 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 PRAMEF13Q5VWM6 474 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 NRMQ8IXM6 262 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 OR52N1Q8NH53 320 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 GNPDA2Q8TDQ7 276 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 C4orf36Q96KX1 117 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 CAPNS2Q96L46 248 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 LINC00615Q96LM1 132 aaPredicted RBP13.06□□□□□ -0.32
SF1-201ENST00000227503 CMSS1Q9BQ75 279 aaKnown RBP13.06□□□□□ -0.32
SF1-201ENST00000227503 SLC22A11Q9NSA0 550 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 COA4Q9NYJ1 87 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 FBXL4Q9UKA2 621 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 OR10H1Q9Y4A9 318 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 LTBP2Q14767 1821 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 IRGMA1A4Y4 181 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 TUBAL3A6NHL2 446 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 KPNA3O00505 521 aaPredicted RBP13.06□□□□□ -0.32
SF1-201ENST00000227503 CDC42EP2O14613 210 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 PPM1DO15297 605 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 SIGLEC6O43699 453 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 KHDRBS3O75525 346 aaKnown RBP13.06□□□□□ -0.32
SF1-201ENST00000227503 POP7O75817 140 aaKnown RBP13.06□□□□□ -0.32
SF1-201ENST00000227503 PAICSP22234 425 aaKnown RBP13.06□□□□□ -0.32
SF1-201ENST00000227503 KCNJ3P48549 501 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 HYAL4Q2M3T9 481 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 ZNF750Q32MQ0 723 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 FAM83HQ6ZRV2 1179 aaPredicted RBP13.06□□□□□ -0.32
SF1-201ENST00000227503 CXXC5Q7LFL8 322 aaKnown RBP13.06□□□□□ -0.32
SF1-201ENST00000227503 CMTM4Q8IZR5 234 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 ACBD7Q8N6N7 88 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 AMER3Q8N944 861 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 OR5J2Q8NH18 312 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 OR5P2Q8WZ92 322 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 RFKQ969G6 155 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 TM4SF18Q96CE8 201 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 F2RL3Q96RI0 385 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 PCYT1BQ9Y5K3 369 aaPredicted RBP13.06□□□□□ -0.32
SF1-201ENST00000227503 DDX6P26196 483 aaKnown RBP eCLIP13.06□□□□□ -0.322e-7■■□□□ 12
SF1-201ENST00000227503 PRR5P85299 388 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 LTB4RQ15722 352 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 LCTLQ6UWM7 567 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 LRRN1Q6UXK5 716 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 VRK2Q86Y07 508 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 OR10K1Q8NGX5 313 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 NANPQ8TBE9 248 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 TOX2Q96NM4 488 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 ZCCHC2Q9C0B9 1178 aaKnown RBP13.06□□□□□ -0.32
SF1-201ENST00000227503 SLC25A18Q9H1K4 315 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 TAS2R3Q9NYW6 316 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 ZMIZ1Q9ULJ6 1067 aa13.06□□□□□ -0.32
SF1-201ENST00000227503 C17orf113A0A1B0GUU1 675 aa13.05□□□□□ -0.32
SF1-201ENST00000227503 CISD3P0C7P0 127 aa13.05□□□□□ -0.32
SF1-201ENST00000227503 LINC00271P0C7V0 271 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms