RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 GKN3PP0CG01 181 aa11.39□□□□□ -0.59
LSM5-201ENST00000223084 PGCP20142 388 aa11.39□□□□□ -0.59
LSM5-201ENST00000223084 DRD4P21917 467 aa11.39□□□□□ -0.59
LSM5-201ENST00000223084 ME2P23368 584 aa11.39□□□□□ -0.59
LSM5-201ENST00000223084 CTSSP25774 331 aa11.39□□□□□ -0.59
LSM5-201ENST00000223084 ADH6P28332 368 aa11.39□□□□□ -0.59
LSM5-201ENST00000223084 LSP1P33241 339 aa11.39□□□□□ -0.59
LSM5-201ENST00000223084 IDH2P48735 452 aaKnown RBP11.39□□□□□ -0.59
LSM5-201ENST00000223084 RPS3AP61247 264 aaKnown RBP11.39□□□□□ -0.59
LSM5-201ENST00000223084 EEF1A1P68104 462 aaKnown RBP11.39□□□□□ -0.59
LSM5-201ENST00000223084 CDK6Q00534 326 aa11.39□□□□□ -0.59
LSM5-201ENST00000223084 TFF3Q07654 80 aa11.39□□□□□ -0.59
LSM5-201ENST00000223084 MERTKQ12866 999 aa11.39□□□□□ -0.59
LSM5-201ENST00000223084 GNA13Q14344 377 aa11.39□□□□□ -0.59
LSM5-201ENST00000223084 ADRM1Q16186 407 aa11.39□□□□□ -0.59
LSM5-201ENST00000223084 SGCBQ16585 318 aa11.39□□□□□ -0.59
LSM5-201ENST00000223084 TMEM176BQ3YBM2 270 aaPredicted RBP11.39□□□□□ -0.59
LSM5-201ENST00000223084 LIN52Q52LA3 116 aa11.39□□□□□ -0.59
LSM5-201ENST00000223084 SLC25A53Q5H9E4 307 aa11.39□□□□□ -0.59
LSM5-201ENST00000223084 REP15Q6BDI9 236 aa11.39□□□□□ -0.59
LSM5-201ENST00000223084 PLEKHM3Q6ZWE6 761 aa11.39□□□□□ -0.59
LSM5-201ENST00000223084 SPATA21Q7Z572 469 aa11.39□□□□□ -0.59
LSM5-201ENST00000223084 CMIPQ8IY22 773 aa11.39□□□□□ -0.59
LSM5-201ENST00000223084 POU5F2Q8N7G0 328 aa11.39□□□□□ -0.59
LSM5-201ENST00000223084 OR2V1Q8NHB1 315 aa11.39□□□□□ -0.59
LSM5-201ENST00000223084 ZNF563Q8TA94 476 aa11.39□□□□□ -0.59
LSM5-201ENST00000223084 BBS10Q8TAM1 723 aa11.39□□□□□ -0.59
LSM5-201ENST00000223084 FNDC9Q8TBE3 224 aa11.39□□□□□ -0.59
LSM5-201ENST00000223084 PMM1Q92871 262 aa11.39□□□□□ -0.59
LSM5-201ENST00000223084 KLHL15Q96M94 604 aa11.39□□□□□ -0.59
LSM5-201ENST00000223084 TM9SF2Q99805 663 aa11.39□□□□□ -0.59
LSM5-201ENST00000223084 SLC39A3Q9BRY0 314 aa11.39□□□□□ -0.59
LSM5-201ENST00000223084 RSPO3Q9BXY4 272 aaPredicted RBP11.39□□□□□ -0.59
LSM5-201ENST00000223084 BCL2L10Q9HD36 194 aa11.39□□□□□ -0.59
LSM5-201ENST00000223084 CHST11Q9NPF2 352 aa11.39□□□□□ -0.59
LSM5-201ENST00000223084 EXOSC3Q9NQT5 275 aaKnown RBP11.39□□□□□ -0.59
LSM5-201ENST00000223084 NPDC1Q9NQX5 325 aaPredicted RBP11.39□□□□□ -0.59
LSM5-201ENST00000223084 ACER3Q9NUN7 267 aa11.39□□□□□ -0.59
LSM5-201ENST00000223084 STOML1Q9UBI4 398 aa11.39□□□□□ -0.59
LSM5-201ENST00000223084 CORO2BQ9UQ03 480 aa11.39□□□□□ -0.59
LSM5-201ENST00000223084 CHST2Q9Y4C5 530 aa11.39□□□□□ -0.59
LSM5-201ENST00000223084 A0A1W2PNR3 127 aa11.38□□□□□ -0.59
LSM5-201ENST00000223084 GMNCA6NCL1 334 aa11.38□□□□□ -0.59
LSM5-201ENST00000223084 ETV2O00321 342 aaPredicted RBP11.38□□□□□ -0.59
LSM5-201ENST00000223084 DVL2O14641 736 aa11.38□□□□□ -0.59
LSM5-201ENST00000223084 MRASO14807 208 aa11.38□□□□□ -0.59
LSM5-201ENST00000223084 ADAMDEC1O15204 470 aa11.38□□□□□ -0.59
LSM5-201ENST00000223084 AQP8O94778 261 aa11.38□□□□□ -0.59
LSM5-201ENST00000223084 ELK4P28324 431 aa11.38□□□□□ -0.59
LSM5-201ENST00000223084 AQP1P29972 269 aa11.38□□□□□ -0.59
LSM5-201ENST00000223084 EPS8Q12929 822 aa11.38□□□□□ -0.59
LSM5-201ENST00000223084 SNTB1Q13884 538 aaKnown RBP11.38□□□□□ -0.59
LSM5-201ENST00000223084 CYLC2Q14093 348 aaPredicted RBP11.38□□□□□ -0.59
LSM5-201ENST00000223084 SCARB2Q14108 478 aa11.38□□□□□ -0.59
LSM5-201ENST00000223084 SLC25A35Q3KQZ1 300 aa11.38□□□□□ -0.59
LSM5-201ENST00000223084 MMEL1Q495T6 779 aa11.38□□□□□ -0.59
LSM5-201ENST00000223084 PRAMEF8Q5VWM4 474 aa11.38□□□□□ -0.59
LSM5-201ENST00000223084 PRAMEF7Q5VXH5 474 aa11.38□□□□□ -0.59
LSM5-201ENST00000223084 HBMQ6B0K9 141 aa11.38□□□□□ -0.59
LSM5-201ENST00000223084 REEP3Q6NUK4 255 aa11.38□□□□□ -0.59
LSM5-201ENST00000223084 ESPNLQ6ZVH7 1005 aa11.38□□□□□ -0.59
LSM5-201ENST00000223084 PTOV1Q86YD1 416 aa11.38□□□□□ -0.59
LSM5-201ENST00000223084 ST8SIA1Q92185 356 aa11.38□□□□□ -0.59
LSM5-201ENST00000223084 OSTF1Q92882 214 aa11.38□□□□□ -0.59
LSM5-201ENST00000223084 LRRC58Q96CX6 371 aa11.38□□□□□ -0.59
LSM5-201ENST00000223084 SRXN1Q9BYN0 137 aa11.38□□□□□ -0.59
LSM5-201ENST00000223084 PIF1Q9H611 641 aa11.38□□□□□ -0.59
LSM5-201ENST00000223084 TMEM38AQ9H6F2 299 aa11.38□□□□□ -0.59
LSM5-201ENST00000223084 CTPS2Q9NRF8 586 aa11.38□□□□□ -0.59
LSM5-201ENST00000223084 ZNF629Q9UEG4 869 aaPredicted RBP11.38□□□□□ -0.59
LSM5-201ENST00000223084 CRYBG3Q68DQ2 2970 aa11.38□□□□□ -0.59
LSM5-201ENST00000223084 CREBBPQ92793 2442 aa11.38□□□□□ -0.59
LSM5-201ENST00000223084 CENPEQ02224 2701 aa11.37□□□□□ -0.59
LSM5-201ENST00000223084 MPDZO75970 2070 aa11.37□□□□□ -0.59
LSM5-201ENST00000223084 ADGRG4Q8IZF6 3080 aa11.37□□□□□ -0.59
LSM5-201ENST00000223084 A0A1W2PNV4 684 aa11.37□□□□□ -0.59
LSM5-201ENST00000223084 CDHR4A6H8M9 788 aa11.37□□□□□ -0.59
LSM5-201ENST00000223084 CFAP73A6NFT4 308 aa11.37□□□□□ -0.59
LSM5-201ENST00000223084 FXYD1O00168 92 aa11.37□□□□□ -0.59
LSM5-201ENST00000223084 FRS3O43559 492 aa11.37□□□□□ -0.59
LSM5-201ENST00000223084 THBS1P07996 1170 aa11.37□□□□□ -0.59
LSM5-201ENST00000223084 PABPC4LP0CB38 370 aaKnown RBP11.37□□□□□ -0.59
LSM5-201ENST00000223084 PRG2P13727 222 aa11.37□□□□□ -0.59
LSM5-201ENST00000223084 CCNA2P20248 432 aa11.37□□□□□ -0.59
LSM5-201ENST00000223084 SLC6A2P23975 617 aa11.37□□□□□ -0.59
LSM5-201ENST00000223084 ADSLP30566 484 aaPredicted RBP11.37□□□□□ -0.59
LSM5-201ENST00000223084 OPRM1P35372 400 aa11.37□□□□□ -0.59
LSM5-201ENST00000223084 ACAA2P42765 397 aaKnown RBP11.37□□□□□ -0.59
LSM5-201ENST00000223084 CARD18P57730 90 aa11.37□□□□□ -0.59
LSM5-201ENST00000223084 SIRPAP78324 504 aa11.37□□□□□ -0.59
LSM5-201ENST00000223084 HOXC5Q00444 222 aa11.37□□□□□ -0.59
LSM5-201ENST00000223084 SELENBP1Q13228 472 aa11.37□□□□□ -0.59
LSM5-201ENST00000223084 LARS2Q15031 903 aaKnown RBP11.37□□□□□ -0.59
LSM5-201ENST00000223084 MAPRE2Q15555 327 aa11.37□□□□□ -0.59
LSM5-201ENST00000223084 CYP51A1Q16850 503 aa11.37□□□□□ -0.59
LSM5-201ENST00000223084 TRMT5Q32P41 509 aaKnown RBP11.37□□□□□ -0.59
LSM5-201ENST00000223084 RABL3Q5HYI8 236 aa11.37□□□□□ -0.59
LSM5-201ENST00000223084 ZNF311Q5JNZ3 666 aa11.37□□□□□ -0.59
LSM5-201ENST00000223084 PDSS1Q5T2R2 415 aa11.37□□□□□ -0.59
LSM5-201ENST00000223084 NANOGP8Q6NSW7 305 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms