RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 RpsaP14206 295 aaKnown RBP19.53■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 RcvrnP34057 202 aa19.53■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Rab26Q504M8 260 aa19.53■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Tmem251Q8BH26 163 aa19.53■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Zc3h14Q8BJ05 735 aaKnown RBP19.53■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Adamts4Q8BNJ2 833 aa19.53■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Krtcap3Q8K177 240 aa19.53■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Olfr1389Q8VGX0 311 aa19.53■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Dus3lQ91XI1 637 aaKnown RBP19.53■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 RhagQ9QUT0 438 aa19.53■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 ChmlQ9QZD5 621 aa19.53■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 KalrnA2CG49 2964 aa19.53■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 MyofQ69ZN7 2048 aaKnown RBP19.52■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Myo15aQ9QZZ4 3511 aa19.52■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Gm21083A0A0G2JFD5 256 aa19.52■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Olfr1375A0A0N4SUP0 313 aa19.52■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Olfr1338A2ACY7 313 aa19.52■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Gm10477F6SW83 55 aa19.52■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Avpr2O88721 371 aa19.52■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Hmgn1P18608 96 aaKnown RBP19.52■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 VipP32648 170 aa19.52■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Cd63P41731 238 aa19.52■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 TesP47226 423 aaKnown RBP19.52■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 FstP47931 344 aa19.52■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Btbd3P58545 530 aa19.52■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Taf1aP97357 453 aa19.52■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Ikzf1Q03267 517 aa19.52■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 B4galnt1Q09200 533 aa19.52■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Apex2Q68G58 516 aa19.52■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Gm5416Q6IE28 97 aa19.52■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 AY358078Q6UY53 465 aa19.52■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Olfr1015Q7TR94 312 aa19.52■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Lrrtm2Q8BGA3 515 aa19.52■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Sult2a8Q8BGL3 282 aa19.52■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Enpp6Q8BGN3 440 aa19.52■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Zfp763Q8BIC7 588 aa19.52■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Ndrg4Q8BTG7 352 aaKnown RBP19.52■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 D2hgdhQ8CIM3 535 aa19.52■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 CipcQ8R0W1 432 aa19.52■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 NotumQ8R116 503 aa19.52■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Nuf2Q99P69 463 aa19.52■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Bcl2l14Q9CPT0 328 aa19.52■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Pbdc1Q9D0B6 198 aa19.52■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Spaca7Q9D2S4 182 aa19.52■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Acp1Q9D358 158 aa19.52■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Spata19Q9DAQ9 154 aa19.52■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Qtrt1Q9JMA2 403 aa19.52■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Mthfd2lD3YZG8 338 aa19.51■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Smim22J3QP37 91 aa19.51■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Kif1cO35071 1100 aaKnown RBP19.51■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Gstm3P19639 218 aa19.51■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Zdhhc11Q14AK4 347 aa19.51■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Kctd21Q3URF8 260 aa19.51■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Ankrd42Q3V096 527 aa19.51■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 SctrQ5FWI2 447 aa19.51■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Dsg1cQ7TSF0 911 aa19.51■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Q8BHG2 160 aa19.51■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Tyw3Q8BSA9 257 aa19.51■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 1700001C19RikQ8K168 210 aa19.51■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Pcdhac1Q91Y10 964 aa19.51■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Mrgpra5Q91ZC7 304 aa19.51■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 TardbpQ921F2 414 aaKnown RBP19.51■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Cers4Q9D6J1 393 aa19.51■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Nxt1Q9QZV9 140 aa19.51■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Kcne3Q9WTW2 103 aa19.51■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 TfecQ9WTW4 317 aa19.51■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Olfr396-ps1A0A0U1RNF5 211 aa19.51■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Gm45711E0CXA2 391 aa19.51■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Gpr137cE9Q343 423 aa19.51■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Ccnd1P25322 295 aa19.51■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Nkx2-6P43688 289 aa19.51■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Adamts15P59384 950 aa19.51■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Isl1P61372 349 aa19.51■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Tgif1P70284 272 aa19.51■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Dppa5bP85965 119 aa19.51■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Col10a1Q05306 680 aa19.51■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Dsg4Q7TMD7 1041 aa19.51■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Clrn3Q8BHH8 226 aa19.51■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Synpo2lQ8BWB1 975 aa19.51■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Hcar1Q8C131 343 aa19.51■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 RybpQ8CCI5 228 aa19.51■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Rcbtb2Q99LJ7 551 aa19.51■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Q9CZV2 255 aa19.51■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 PaicsQ9DCL9 425 aa19.51■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Cnot9Q9JKY0 299 aa19.51■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Trim3Q9R1R2 744 aa19.51■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 NfkbiaQ9Z1E3 314 aa19.51■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Vmn2r51L7N215 852 aa19.5■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 CckbrP56481 453 aa19.5■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Agbl5Q09M02 886 aa19.5■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Magee2Q52KG3 523 aa19.5■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Olfr728Q7TRM6 311 aa19.5■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Catsper4Q8BVN3 442 aa19.5■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Pqlc3Q8C6U2 202 aa19.5■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Mrgpra8Q91ZC4 305 aa19.5■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Uck2Q99PM9 261 aa19.5■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 HypmQ9CR04 117 aa19.5■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 IqchQ9D2K4 1071 aa19.5■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Olfr930Q9EQ99 308 aa19.5■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Ints1Q6P4S8 2195 aa19.5■□□□□ 0.71
Retrieved 100 of 22,080 RNA–protein pairs in 24.9 ms