RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Kcnj1O88335 372 aa9.35□□□□□ -0.91
Ldlr-201ENSMUST00000034713 AldocP05063 363 aa9.35□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Irf1P15314 329 aa9.35□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Dlx2P40764 332 aa9.35□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Hes5P70120 167 aa9.35□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Pde7aP70453 456 aa9.35□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Gm906Q3V0M1 1017 aa9.35□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Slc44a5Q5RJI2 710 aa9.35□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Kctd9Q80UN1 339 aa9.35□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Zik1Q80YP6 463 aa9.35□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Slc30a6Q8BJM5 460 aa9.35□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Nudt6Q8CH40 313 aa9.35□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Lgi4Q8K1S1 537 aa9.35□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Olfr535Q8VGL3 312 aa9.35□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Papd4Q91YI6 484 aa9.35□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Stoml2Q99JB2 353 aaKnown RBP9.35□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Rnf111Q99ML9 989 aa9.35□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Fam96bQ9D187 163 aa9.35□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Lamtor5Q9D1L9 91 aa9.35□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Tnfsf13Q9D777 241 aa9.35□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Amdhd1Q9DBA8 426 aa9.35□□□□□ -0.91
Ldlr-201ENSMUST00000034713 AspdhQ9DCQ2 287 aa9.35□□□□□ -0.91
Ldlr-201ENSMUST00000034713 GltpQ9JL62 209 aa9.35□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Nupr1Q9WTK0 80 aa9.35□□□□□ -0.91
Ldlr-201ENSMUST00000034713 A0A1L1SV24 88 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Zfp992B1ASD8 573 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Vmn2r69G3XA45 850 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Vmn2r13L7N1X2 831 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 P01810 119 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 NelfeP19426 375 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Hoxa10P31310 416 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Efna1P52793 205 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Prss53Q571E5 552 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Taar8aQ5QD07 344 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Alkbh2Q6P6J4 239 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Methig1Q76I26 264 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Ubfd1Q78JW9 368 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 MylipQ8BM54 445 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Zfp991Q8R1N3 573 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Slc2a10Q8VHD6 536 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Wdr45Q91VM3 360 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Fuca1Q99LJ1 452 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Hsbp1Q9CQZ1 76 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Rpl34Q9D1R9 117 aaKnown RBP9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 RtcAQ9D7H3 366 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Pop7Q9DCH2 140 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Vmn1r52Q9EP79 309 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Zgrf1Q0VGT4 1863 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Zfp81B8JJZ7 531 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Ap1arE9PYF7 298 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Olfr287E9PZS7 322 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Xkr6E9Q6C8 638 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Alx3O70137 343 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Hnrnpa2b1O88569 353 aaKnown RBP9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 P03987 398 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 En1P09065 401 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Rab8bP61028 207 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Btg1P62325 171 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Ufd1P70362 307 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 TsxP70675 144 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 AccslQ3UX83 580 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 EgflamQ4VBE4 1017 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Zp1Q62005 623 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 ManeaQ6NXH2 462 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Doc2aQ7TNF0 405 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Olfr1307Q7TQX1 312 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Ndrg4Q8BTG7 352 aaKnown RBP9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Gpr107Q8BUV8 551 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Yod1Q8CB27 343 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Nkd2Q8VE28 461 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Olfr398Q8VFY0 314 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Ubap2Q91VX2 1132 aaKnown RBP9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 SelenosQ9BCZ4 190 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Timm22Q9CQ85 194 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Lingo1Q9D1T0 614 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 PmpcaQ9DC61 524 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Plscr2Q9DCW2 307 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Lpar2Q9JL06 348 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Gm31371A0A1D5RM70 265 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Vmn2r117K7N6V1 857 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 LifP09056 203 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 SnrpgP62309 76 aaKnown RBP9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Wbp2P97765 261 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Dcp1bQ3U564 578 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Ankrd37Q569N2 159 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Usp22Q5DU02 525 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Fam122bQ6NZE7 255 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 RgmaQ6PCX7 454 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Ccdc116Q80X53 541 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 B130006D01RikQ8BRH6 153 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Osgin1Q8VC10 478 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 HadhbQ99JY0 475 aaKnown RBP9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Psat1Q99K85 370 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Cir1Q9DA19 450 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Tlr1Q9EPQ1 795 aa9.34□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Obp1bA2AEP0 171 aa9.33□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Gm14743A2BHD2 171 aa9.33□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Gm13285B1AYI3 182 aa9.33□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Gm13275B1AYI8 182 aa9.33□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Gm11027G8JL69 66 aa9.33□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 45.7 ms