RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 P01635 115 aa17.11■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 F9P16294 471 aa17.11■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Mfsd2bQ3T9M1 494 aa17.11■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Xkr7Q5GH64 580 aa17.11■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Q5SPV6 233 aa17.11■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Ppp3r1Q63810 170 aa17.11■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Alg8Q6P8H8 526 aa17.11■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Mfsd4aQ6PDC8 510 aa17.11■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Serpinb9fQ80UK5 377 aa17.11■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 A730049H05RikQ8C940 139 aa17.11■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 RfkQ8CFV9 155 aa17.11■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Gpr18Q8K1Z6 331 aa17.11■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Olfr61Q8VGM2 311 aa17.11■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Serpinb9gQ8VHQ1 377 aa17.11■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Smarcd2Q99JR8 531 aaKnown RBP17.11■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Tada1Q99LM9 335 aa17.11■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Lpcat2bQ9D5U0 516 aa17.11■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Ift43Q9DA69 206 aa17.11■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 NcdnQ9Z0E0 729 aa17.11■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Pgm2A2CEK3 580 aa17.1■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Gsg1lD3Z7H4 322 aa17.1■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Olfr294F7CWV4 335 aa17.1■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Olfr574F8VQ18 346 aa17.1■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Nipsnap2O55126 281 aa17.1■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Htr1fQ02284 366 aa17.1■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Crtc2Q3U182 692 aa17.1■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 C130050O18RikQ497Y9 356 aa17.1■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Adam12Q61824 903 aa17.1■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Ccdc85bQ6PDY0 202 aa17.1■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Pced1bQ8BGX1 433 aaKnown RBP17.1■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Slc25a21Q8BZ09 298 aa17.1■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 DctdQ8K2D6 178 aa17.1■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Agbl4Q09LZ8 540 aa17.1■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Slc6a5Q761V0 799 aa17.1■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Olfr70Q80ZX9 316 aa17.1■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Gpr68Q8BFQ3 365 aa17.1■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Zfp763Q8BIC7 588 aa17.1■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 MdficQ8BX65 247 aa17.1■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Gm9938Q8C3P5 112 aa17.1■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Zfp119bQ8K0G9 543 aa17.1■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 CipcQ8R0W1 432 aa17.1■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Cib4Q9D9N5 185 aa17.1■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Ap3s1Q9DCR2 193 aa17.1■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Ca7Q9ERQ8 264 aa17.1■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Frem2Q6NVD0 3160 aa17.09■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Rnf217D3YYI7 515 aa17.09■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Zfp605E9QAH2 694 aa17.09■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Arl9F7BE40 171 aa17.09■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Gm20695H3BLK7 282 aa17.09■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Bcl2a1dO55179 172 aa17.09■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Lire1P11260 357 aa17.09■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Hoxd1Q01822 328 aa17.09■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Sema3bQ62177 748 aa17.09■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 SnupnQ80W37 358 aa17.09■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Cep68Q8C0D9 733 aa17.09■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Zc3h10Q8R205 435 aaKnown RBP17.09■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Ces2cQ91WG0 561 aa17.09■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Fank1Q9DAM9 344 aa17.09■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Sgk3Q9ERE3 496 aa17.09■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Tmem37Q9JJV3 211 aa17.09■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Grb14Q9JLM9 538 aa17.09■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Ulk2Q9QY01 1037 aa17.09■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Adap1E9PY16 374 aa17.09■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 FkbplO35450 347 aa17.09■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Csn1s1P19228 313 aa17.09■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Thbs1P35441 1170 aa17.09■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Eif4eP63073 217 aaKnown RBP17.09■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Teddm2Q208S0 260 aa17.09■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Xrcc1Q60596 631 aa17.09■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 MertkQ60805 994 aa17.09■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 D11Wsu47eQ6PIX9 558 aa17.09■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Eid2Q6X7S9 236 aa17.09■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Avl9Q80U56 649 aa17.09■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Cadm2Q8BLQ9 435 aa17.09■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Fam149aQ8CFV2 787 aa17.09■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Olfr202Q8VGQ3 307 aa17.09■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Fmo4Q8VHG0 560 aa17.09■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Mrpl37Q921S7 423 aaKnown RBP17.09■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Slc46a3Q9DC26 460 aa17.09■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Acox3Q9EPL9 700 aa17.09■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Gm21865A0A087WRL2 222 aa17.08■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Ajap1A2ALI5 412 aa17.08■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Tmem240B2RWJ3 173 aa17.08■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Olfr746E9Q840 314 aa17.08■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Zfp870J3QMA4 560 aa17.08■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 H2-ObO35424 271 aa17.08■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Fcn2O70497 314 aa17.08■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 TrhrP21761 393 aa17.08■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Tcea3P23881 347 aaKnown RBP17.08■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Fgf11P70378 225 aa17.08■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Coq7P97478 217 aa17.08■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 ToxQ66JW3 526 aa17.08■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Q8BHB7 409 aa17.08■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Slc35c1Q8BLX4 363 aa17.08■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Gm42417Q8K1D0 126 aa17.08■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Med9Q8VCS6 142 aa17.08■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Atp5f1Q9CQQ7 256 aaKnown RBP17.08■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Dnmt3lQ9CWR8 421 aaKnown RBP17.08■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Clec2iQ9WVF9 217 aa17.08■□□□□ 0.33
Ccdc3-201ENSMUST00000027988 Vmn2r110E9PWD5 858 aa17.08■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 27.1 ms