RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 QPRTQ15274 297 aa19.61■□□□□ 0.73
SCN1B-206ENST00000638536 SP5Q6BEB4 398 aaPredicted RBP19.61■□□□□ 0.73
SCN1B-206ENST00000638536 A4GALTQ9NPC4 353 aa19.61■□□□□ 0.73
SCN1B-206ENST00000638536 ST6GALNAC1Q9NSC7 600 aaPredicted RBP19.61■□□□□ 0.73
SCN1B-206ENST00000638536 DNAJB12Q9NXW2 375 aaKnown RBP19.61■□□□□ 0.73
SCN1B-206ENST00000638536 KLF2Q9Y5W3 355 aaPredicted RBP19.61■□□□□ 0.73
SCN1B-206ENST00000638536 AP4B1Q9Y6B7 739 aa19.61■□□□□ 0.73
SCN1B-206ENST00000638536 LOC100653049A0A140TA62 436 aa19.6■□□□□ 0.73
SCN1B-206ENST00000638536 LINC01387J3KSC0 135 aa19.6■□□□□ 0.73
SCN1B-206ENST00000638536 KRT34O76011 436 aa19.6■□□□□ 0.73
SCN1B-206ENST00000638536 NTN1O95631 604 aa19.6■□□□□ 0.73
SCN1B-206ENST00000638536 LSP1P33241 339 aa19.6■□□□□ 0.73
SCN1B-206ENST00000638536 RYKP34925 604 aa19.6■□□□□ 0.73
SCN1B-206ENST00000638536 CRISP3P54108 245 aa19.6■□□□□ 0.73
SCN1B-206ENST00000638536 MTPNP58546 118 aa19.6■□□□□ 0.73
SCN1B-206ENST00000638536 CBFBQ13951 182 aa19.6■□□□□ 0.73
SCN1B-206ENST00000638536 NFYCQ13952 458 aa19.6■□□□□ 0.73
SCN1B-206ENST00000638536 ADRM1Q16186 407 aa19.6■□□□□ 0.73
SCN1B-206ENST00000638536 CTU2Q2VPK5 515 aaKnown RBP19.6■□□□□ 0.73
SCN1B-206ENST00000638536 TOR1AIP2Q8NFQ8 470 aa19.6■□□□□ 0.73
SCN1B-206ENST00000638536 ASB5Q8WWX0 329 aa19.6■□□□□ 0.73
SCN1B-206ENST00000638536 FIG4Q92562 907 aa19.6■□□□□ 0.73
SCN1B-206ENST00000638536 ADGRG7Q96K78 797 aa19.6■□□□□ 0.73
SCN1B-206ENST00000638536 ANKRD27Q96NW4 1050 aa19.6■□□□□ 0.73
SCN1B-206ENST00000638536 UCN2Q96RP3 112 aa19.6■□□□□ 0.73
SCN1B-206ENST00000638536 CGREF1Q99674 301 aa19.6■□□□□ 0.73
SCN1B-206ENST00000638536 SLC39A3Q9BRY0 314 aa19.6■□□□□ 0.73
SCN1B-206ENST00000638536 FAM107BQ9H098 131 aa19.6■□□□□ 0.73
SCN1B-206ENST00000638536 SLC35A3Q9Y2D2 325 aa19.6■□□□□ 0.73
SCN1B-206ENST00000638536 TNFSF12-TNFSF13A0A0A6YY99 330 aa19.59■□□□□ 0.73
SCN1B-206ENST00000638536 IL7RP16871 459 aa19.59■□□□□ 0.73
SCN1B-206ENST00000638536 DRD4P21917 467 aa19.59■□□□□ 0.73
SCN1B-206ENST00000638536 TFF3Q07654 80 aa19.59■□□□□ 0.73
SCN1B-206ENST00000638536 MRPL2Q5T653 305 aaKnown RBP19.59■□□□□ 0.73
SCN1B-206ENST00000638536 ZNF836Q6ZNA1 936 aa19.59■□□□□ 0.73
SCN1B-206ENST00000638536 MEIOBQ8N635 442 aa19.59■□□□□ 0.73
SCN1B-206ENST00000638536 OR52P1PQ8NH57 321 aa19.59■□□□□ 0.73
SCN1B-206ENST00000638536 NFKBIDQ8NI38 313 aa19.59■□□□□ 0.73
SCN1B-206ENST00000638536 WDR60Q8WVS4 1066 aa19.59■□□□□ 0.73
SCN1B-206ENST00000638536 OIT3Q8WWZ8 545 aa19.59■□□□□ 0.73
SCN1B-206ENST00000638536 PINK1Q9BXM7 581 aa19.59■□□□□ 0.73
SCN1B-206ENST00000638536 RAD21L1Q9H4I0 556 aa19.59■□□□□ 0.73
SCN1B-206ENST00000638536 GPC6Q9Y625 555 aaPredicted RBP19.59■□□□□ 0.73
SCN1B-206ENST00000638536 NAV2Q8IVL1 2488 aa19.59■□□□□ 0.73
SCN1B-206ENST00000638536 ABCA12Q86UK0 2595 aa19.58■□□□□ 0.73
SCN1B-206ENST00000638536 A0A0J9YW62 118 aa19.58■□□□□ 0.73
SCN1B-206ENST00000638536 FAM47E-STBD1D6RA91 191 aa19.58■□□□□ 0.73
SCN1B-206ENST00000638536 ETV2O00321 342 aaPredicted RBP19.58■□□□□ 0.73
SCN1B-206ENST00000638536 EIF1AYO14602 144 aaKnown RBP19.58■□□□□ 0.73
SCN1B-206ENST00000638536 AP3D1O14617 1153 aa19.58■□□□□ 0.73
SCN1B-206ENST00000638536 ARAFP10398 606 aa19.58■□□□□ 0.73
SCN1B-206ENST00000638536 NID1P14543 1247 aa19.58■□□□□ 0.73
SCN1B-206ENST00000638536 SESN3P58005 492 aa19.58■□□□□ 0.73
SCN1B-206ENST00000638536 RAC1P63000 192 aa19.58■□□□□ 0.73
SCN1B-206ENST00000638536 SLC25A53Q5H9E4 307 aa19.58■□□□□ 0.73
SCN1B-206ENST00000638536 SNX32Q86XE0 403 aa19.58■□□□□ 0.73
SCN1B-206ENST00000638536 LILRA2Q8N149 483 aa19.58■□□□□ 0.73
SCN1B-206ENST00000638536 CLIP4Q8N3C7 705 aa19.58■□□□□ 0.73
SCN1B-206ENST00000638536 RELL2Q8NC24 303 aaPredicted RBP19.58■□□□□ 0.73
SCN1B-206ENST00000638536 THUMPD1Q9NXG2 353 aaKnown RBP19.58■□□□□ 0.73
SCN1B-206ENST00000638536 NOTCH2Q04721 2471 aa19.58■□□□□ 0.73
SCN1B-206ENST00000638536 A0A0G2JPF8 293 aa19.58■□□□□ 0.72
SCN1B-206ENST00000638536 HNRNPCL2B2RXH8 293 aa19.58■□□□□ 0.72
SCN1B-206ENST00000638536 HNRNPCL3B7ZW38 293 aa19.58■□□□□ 0.72
SCN1B-206ENST00000638536 HNRNPCL1O60812 293 aaKnown RBP19.58■□□□□ 0.72
SCN1B-206ENST00000638536 PGM3O95394 542 aa19.58■□□□□ 0.72
SCN1B-206ENST00000638536 IL2RAP01589 272 aa19.58■□□□□ 0.72
SCN1B-206ENST00000638536 DBIP07108 87 aaKnown RBP19.58■□□□□ 0.72
SCN1B-206ENST00000638536 HNRNPCL4P0DMR1 293 aa19.58■□□□□ 0.72
SCN1B-206ENST00000638536 SFTPDP35247 375 aa19.58■□□□□ 0.72
SCN1B-206ENST00000638536 EIF1P41567 113 aaKnown RBP19.58■□□□□ 0.72
SCN1B-206ENST00000638536 GNGT1P63211 74 aa19.58■□□□□ 0.72
SCN1B-206ENST00000638536 SF3B4Q15427 424 aaKnown RBP eCLIP19.58■□□□□ 0.725e-6■■■■□ 26.7
SCN1B-206ENST00000638536 GCNT6Q5T4J0 391 aa19.58■□□□□ 0.72
SCN1B-206ENST00000638536 SPATA21Q7Z572 469 aa19.58■□□□□ 0.72
SCN1B-206ENST00000638536 PEX5LQ8IYB4 626 aa19.58■□□□□ 0.72
SCN1B-206ENST00000638536 GCNT2Q8N0V5 402 aa19.58■□□□□ 0.72
SCN1B-206ENST00000638536 METTL25Q8N6Q8 603 aa19.58■□□□□ 0.72
SCN1B-206ENST00000638536 ATP6V1C2Q8NEY4 427 aa19.58■□□□□ 0.72
SCN1B-206ENST00000638536 CALML5Q9NZT1 146 aa19.58■□□□□ 0.72
SCN1B-206ENST00000638536 EVPLLA8MZ36 301 aa19.57■□□□□ 0.72
SCN1B-206ENST00000638536 FXYD1O00168 92 aa19.57■□□□□ 0.72
SCN1B-206ENST00000638536 TNFSF11O14788 317 aa19.57■□□□□ 0.72
SCN1B-206ENST00000638536 GKN3PP0CG01 181 aa19.57■□□□□ 0.72
SCN1B-206ENST00000638536 BMP5P22003 454 aa19.57■□□□□ 0.72
SCN1B-206ENST00000638536 PPIBP23284 216 aaKnown RBP19.57■□□□□ 0.72
SCN1B-206ENST00000638536 ADH6P28332 368 aa19.57■□□□□ 0.72
SCN1B-206ENST00000638536 EEF1A1P68104 462 aaKnown RBP19.57■□□□□ 0.72
SCN1B-206ENST00000638536 REP15Q6BDI9 236 aa19.57■□□□□ 0.72
SCN1B-206ENST00000638536 PTOV1Q86YD1 416 aa19.57■□□□□ 0.72
SCN1B-206ENST00000638536 GRAMD2AQ8IUY3 354 aa19.57■□□□□ 0.72
SCN1B-206ENST00000638536 POU5F2Q8N7G0 328 aa19.57■□□□□ 0.72
SCN1B-206ENST00000638536 FNDC9Q8TBE3 224 aa19.57■□□□□ 0.72
SCN1B-206ENST00000638536 PMM1Q92871 262 aa19.57■□□□□ 0.72
SCN1B-206ENST00000638536 WNT2BQ93097 391 aa19.57■□□□□ 0.72
SCN1B-206ENST00000638536 INTS12Q96CB8 462 aaKnown RBP19.57■□□□□ 0.72
SCN1B-206ENST00000638536 BCL2L10Q9HD36 194 aa19.57■□□□□ 0.72
SCN1B-206ENST00000638536 NPDC1Q9NQX5 325 aaPredicted RBP19.57■□□□□ 0.72
SCN1B-206ENST00000638536 ZNF443Q9Y2A4 671 aaPredicted RBP19.57■□□□□ 0.72
SCN1B-206ENST00000638536 FBN2P35556 2912 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms