RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 ARSKQ6UWY0 536 aa13.34□□□□□ -0.27
PNKP-221ENST00000627317 CCDC80Q76M96 950 aa13.34□□□□□ -0.27
PNKP-221ENST00000627317 TRILQ7L0X0 811 aa13.34□□□□□ -0.27
PNKP-221ENST00000627317 BHLHE22Q8NFJ8 381 aaPredicted RBP13.34□□□□□ -0.27
PNKP-221ENST00000627317 FIG4Q92562 907 aa13.34□□□□□ -0.27
PNKP-221ENST00000627317 SFXN2Q96NB2 322 aa13.34□□□□□ -0.27
PNKP-221ENST00000627317 PINK1Q9BXM7 581 aa13.34□□□□□ -0.27
PNKP-221ENST00000627317 MED17Q9NVC6 651 aa13.34□□□□□ -0.27
PNKP-221ENST00000627317 RLIMQ9NVW2 624 aa13.34□□□□□ -0.27
PNKP-221ENST00000627317 KLHL28Q9NXS3 571 aa13.34□□□□□ -0.27
PNKP-221ENST00000627317 TINAGQ9UJW2 476 aa13.34□□□□□ -0.27
PNKP-221ENST00000627317 ICAM5Q9UMF0 924 aa13.34□□□□□ -0.27
PNKP-221ENST00000627317 RPH3AQ9Y2J0 694 aaPredicted RBP13.34□□□□□ -0.27
PNKP-221ENST00000627317 NCKAP5O14513 1909 aa13.34□□□□□ -0.27
PNKP-221ENST00000627317 M0QX08 132 aa13.33□□□□□ -0.28
PNKP-221ENST00000627317 CXCR6O00574 342 aa13.33□□□□□ -0.28
PNKP-221ENST00000627317 GYG2O15488 501 aa13.33□□□□□ -0.28
PNKP-221ENST00000627317 ZNHIT1O43257 154 aa13.33□□□□□ -0.28
PNKP-221ENST00000627317 SUSD5O60279 629 aa13.33□□□□□ -0.28
PNKP-221ENST00000627317 MFN2O95140 757 aa13.33□□□□□ -0.28
PNKP-221ENST00000627317 HSD17B1P14061 328 aa13.33□□□□□ -0.28
PNKP-221ENST00000627317 UQCRBP14927 111 aa13.33□□□□□ -0.28
PNKP-221ENST00000627317 TCN1P20061 433 aaPredicted RBP13.33□□□□□ -0.28
PNKP-221ENST00000627317 PGCP20142 388 aa13.33□□□□□ -0.28
PNKP-221ENST00000627317 RYKP34925 604 aa13.33□□□□□ -0.28
PNKP-221ENST00000627317 PER3P56645 1201 aa13.33□□□□□ -0.28
PNKP-221ENST00000627317 PLAURQ03405 335 aa13.33□□□□□ -0.28
PNKP-221ENST00000627317 DMTNQ08495 405 aa13.33□□□□□ -0.28
PNKP-221ENST00000627317 BNIP1Q12981 228 aa13.33□□□□□ -0.28
PNKP-221ENST00000627317 PLPPR5Q32ZL2 321 aa13.33□□□□□ -0.28
PNKP-221ENST00000627317 SPATS1Q496A3 300 aa13.33□□□□□ -0.28
PNKP-221ENST00000627317 DNAL1Q4LDG9 190 aa13.33□□□□□ -0.28
PNKP-221ENST00000627317 ARHGAP11AQ6P4F7 1023 aa13.33□□□□□ -0.28
PNKP-221ENST00000627317 C6orf89Q6UWU4 347 aa13.33□□□□□ -0.28
PNKP-221ENST00000627317 GRAMD2AQ8IUY3 354 aa13.33□□□□□ -0.28
PNKP-221ENST00000627317 ARHGAP24Q8N264 748 aa13.33□□□□□ -0.28
PNKP-221ENST00000627317 CLIP4Q8N3C7 705 aa13.33□□□□□ -0.28
PNKP-221ENST00000627317 SMYD1Q8NB12 490 aa13.33□□□□□ -0.28
PNKP-221ENST00000627317 NEIL3Q8TAT5 605 aa13.33□□□□□ -0.28
PNKP-221ENST00000627317 ITLN2Q8WWU7 325 aaPredicted RBP13.33□□□□□ -0.28
PNKP-221ENST00000627317 RASSF5Q8WWW0 418 aa13.33□□□□□ -0.28
PNKP-221ENST00000627317 TAMM41Q96BW9 452 aa13.33□□□□□ -0.28
PNKP-221ENST00000627317 ARSGQ96EG1 525 aa13.33□□□□□ -0.28
PNKP-221ENST00000627317 CCDC120Q96HB5 630 aa13.33□□□□□ -0.28
PNKP-221ENST00000627317 C1orf21Q9H246 121 aa13.33□□□□□ -0.28
PNKP-221ENST00000627317 TAS2R1Q9NYW7 299 aa13.33□□□□□ -0.28
PNKP-221ENST00000627317 PRPF19Q9UMS4 504 aaKnown RBP13.33□□□□□ -0.28
PNKP-221ENST00000627317 SLC6A5Q9Y345 797 aa13.33□□□□□ -0.28
PNKP-221ENST00000627317 MRPS18CQ9Y3D5 142 aaKnown RBP13.33□□□□□ -0.28
PNKP-221ENST00000627317 DNAJC13O75165 2243 aa13.33□□□□□ -0.28
PNKP-221ENST00000627317 TRGV8A0A0C4DH27 118 aa13.32□□□□□ -0.28
PNKP-221ENST00000627317 A0A1B0GTH9 108 aa13.32□□□□□ -0.28
PNKP-221ENST00000627317 CFAP73A6NFT4 308 aa13.32□□□□□ -0.28
PNKP-221ENST00000627317 AQP7O14520 342 aa13.32□□□□□ -0.28
PNKP-221ENST00000627317 ZIC3O60481 467 aa13.32□□□□□ -0.28
PNKP-221ENST00000627317 GCM2O75603 506 aaPredicted RBP13.32□□□□□ -0.28
PNKP-221ENST00000627317 ATP5HO75947 161 aa13.32□□□□□ -0.28
PNKP-221ENST00000627317 FREM3P0C091 2139 aa13.32□□□□□ -0.28
PNKP-221ENST00000627317 LINGO3P0C6S8 592 aa13.32□□□□□ -0.28
PNKP-221ENST00000627317 ABOP16442 354 aa13.32□□□□□ -0.28
PNKP-221ENST00000627317 HTR1EP28566 365 aa13.32□□□□□ -0.28
PNKP-221ENST00000627317 KDELR2P33947 212 aa13.32□□□□□ -0.28
PNKP-221ENST00000627317 RASSF2P50749 326 aa13.32□□□□□ -0.28
PNKP-221ENST00000627317 QPRTQ15274 297 aa13.32□□□□□ -0.28
PNKP-221ENST00000627317 AAGABQ6PD74 315 aa13.32□□□□□ -0.28
PNKP-221ENST00000627317 CCDC121Q6ZUS5 278 aa13.32□□□□□ -0.28
PNKP-221ENST00000627317 ZNF550Q7Z398 422 aa13.32□□□□□ -0.28
PNKP-221ENST00000627317 ZGRF1Q86YA3 2104 aa13.32□□□□□ -0.28
PNKP-221ENST00000627317 FAM156AQ8NDB6 213 aa13.32□□□□□ -0.28
PNKP-221ENST00000627317 ZNF563Q8TA94 476 aa13.32□□□□□ -0.28
PNKP-221ENST00000627317 GPR119Q8TDV5 335 aa13.32□□□□□ -0.28
PNKP-221ENST00000627317 TMEM234Q8WY98 164 aa13.32□□□□□ -0.28
PNKP-221ENST00000627317 FAM162AQ96A26 154 aa13.32□□□□□ -0.28
PNKP-221ENST00000627317 ZBTB8AQ96BR9 441 aa13.32□□□□□ -0.28
PNKP-221ENST00000627317 KLHDC3Q9BQ90 382 aa13.32□□□□□ -0.28
PNKP-221ENST00000627317 PIGQQ9BRB3 760 aa13.32□□□□□ -0.28
PNKP-221ENST00000627317 EGFL7Q9UHF1 273 aa13.32□□□□□ -0.28
PNKP-221ENST00000627317 ADGRG4Q8IZF6 3080 aa13.32□□□□□ -0.28
PNKP-221ENST00000627317 NOTCH2Q04721 2471 aa13.31□□□□□ -0.28
PNKP-221ENST00000627317 A0A1B0GVC2 190 aa13.31□□□□□ -0.28
PNKP-221ENST00000627317 C7orf72A4D263 438 aa13.31□□□□□ -0.28
PNKP-221ENST00000627317 SHISA8B8ZZ34 492 aa13.31□□□□□ -0.28
PNKP-221ENST00000627317 SYT5O00445 386 aa13.31□□□□□ -0.28
PNKP-221ENST00000627317 EBAG9O00559 213 aa13.31□□□□□ -0.28
PNKP-221ENST00000627317 AP3D1O14617 1153 aa13.31□□□□□ -0.28
PNKP-221ENST00000627317 FRS3O43559 492 aa13.31□□□□□ -0.28
PNKP-221ENST00000627317 TPST1O60507 370 aa13.31□□□□□ -0.28
PNKP-221ENST00000627317 GKN3PP0CG01 181 aa13.31□□□□□ -0.28
PNKP-221ENST00000627317 NCK1P16333 377 aa13.31□□□□□ -0.28
PNKP-221ENST00000627317 ZNF17P17021 662 aa13.31□□□□□ -0.28
PNKP-221ENST00000627317 GGT1P19440 569 aa13.31□□□□□ -0.28
PNKP-221ENST00000627317 CD247P20963 164 aa13.31□□□□□ -0.28
PNKP-221ENST00000627317 PTGS2P35354 604 aa13.31□□□□□ -0.28
PNKP-221ENST00000627317 EIF1P41567 113 aaKnown RBP13.31□□□□□ -0.28
PNKP-221ENST00000627317 RGS8P57771 180 aaPredicted RBP13.31□□□□□ -0.28
PNKP-221ENST00000627317 NCALDP61601 193 aa13.31□□□□□ -0.28
PNKP-221ENST00000627317 ADORA2A-AS1P86434 159 aa13.31□□□□□ -0.28
PNKP-221ENST00000627317 EPS8Q12929 822 aa13.31□□□□□ -0.28
PNKP-221ENST00000627317 FOXF1Q12946 379 aa13.31□□□□□ -0.28
PNKP-221ENST00000627317 CEACAM7Q14002 265 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms