RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 RPS19P39019 145 aaKnown RBP18.17■□□□□ 0.5
PCDHB11-202ENST00000624887 ZNF45Q02386 682 aa18.17■□□□□ 0.5
PCDHB11-202ENST00000624887 TRIM16LQ309B1 348 aa18.17■□□□□ 0.5
PCDHB11-202ENST00000624887 LINC00114Q6XXX2 140 aa18.17■□□□□ 0.5
PCDHB11-202ENST00000624887 THSD4Q6ZMP0 1018 aa18.17■□□□□ 0.5
PCDHB11-202ENST00000624887 TTLL10Q6ZVT0 673 aa18.17■□□□□ 0.5
PCDHB11-202ENST00000624887 PLXDC1Q8IUK5 500 aa18.17■□□□□ 0.5
PCDHB11-202ENST00000624887 OR7G1Q8NGA0 311 aa18.17■□□□□ 0.5
PCDHB11-202ENST00000624887 MVB12AQ96EY5 273 aa18.17■□□□□ 0.5
PCDHB11-202ENST00000624887 ZNF649Q9BS31 505 aa18.17■□□□□ 0.5
PCDHB11-202ENST00000624887 JAM3Q9BX67 310 aa18.17■□□□□ 0.5
PCDHB11-202ENST00000624887 NUAK2Q9H093 628 aa18.17■□□□□ 0.5
PCDHB11-202ENST00000624887 GMEB2Q9UKD1 530 aa18.17■□□□□ 0.5
PCDHB11-202ENST00000624887 PAIP2BQ9ULR5 123 aaKnown RBP18.17■□□□□ 0.5
PCDHB11-202ENST00000624887 MMACHCQ9Y4U1 282 aa18.17■□□□□ 0.5
PCDHB11-202ENST00000624887 USP34Q70CQ2 3546 aa18.16■□□□□ 0.5
PCDHB11-202ENST00000624887 FAM183AA6NL82 134 aa18.16■□□□□ 0.5
PCDHB11-202ENST00000624887 C17orf105B2RV13 164 aa18.16■□□□□ 0.5
PCDHB11-202ENST00000624887 TMEM150CB9EJG8 249 aa18.16■□□□□ 0.5
PCDHB11-202ENST00000624887 K7ESF4 209 aa18.16■□□□□ 0.5
PCDHB11-202ENST00000624887 HCN1O60741 890 aa18.16■□□□□ 0.5
PCDHB11-202ENST00000624887 DCNP07585 359 aaKnown RBP18.16■□□□□ 0.5
PCDHB11-202ENST00000624887 CXCL12P48061 93 aa18.16■□□□□ 0.5
PCDHB11-202ENST00000624887 SEPHS1P49903 392 aa18.16■□□□□ 0.5
PCDHB11-202ENST00000624887 CFHR1Q03591 330 aa18.16■□□□□ 0.5
PCDHB11-202ENST00000624887 PLK5Q496M5 336 aa18.16■□□□□ 0.5
PCDHB11-202ENST00000624887 PLBD1Q6P4A8 553 aa18.16■□□□□ 0.5
PCDHB11-202ENST00000624887 ULK3Q6PHR2 472 aa18.16■□□□□ 0.5
PCDHB11-202ENST00000624887 LHFPL3Q86UP9 236 aa18.16■□□□□ 0.5
PCDHB11-202ENST00000624887 ZSCAN1Q8NBB4 408 aa18.16■□□□□ 0.5
PCDHB11-202ENST00000624887 PSD4Q8NDX1 1056 aa18.16■□□□□ 0.5
PCDHB11-202ENST00000624887 OR4C3Q8NH37 302 aa18.16■□□□□ 0.5
PCDHB11-202ENST00000624887 UFD1Q92890 307 aa18.16■□□□□ 0.5
PCDHB11-202ENST00000624887 OR1F2PQ96R84 312 aa18.16■□□□□ 0.5
PCDHB11-202ENST00000624887 DUSP15Q9H1R2 295 aaPredicted RBP18.16■□□□□ 0.5
PCDHB11-202ENST00000624887 CMC2Q9NRP2 79 aa18.16■□□□□ 0.5
PCDHB11-202ENST00000624887 FAM86C2PA6NEL3 165 aa18.15■□□□□ 0.5
PCDHB11-202ENST00000624887 SERINC4A6NH21 518 aa18.15■□□□□ 0.5
PCDHB11-202ENST00000624887 SAGE2PA6NJ88 616 aa18.15■□□□□ 0.5
PCDHB11-202ENST00000624887 EFCAB7A8K855 629 aa18.15■□□□□ 0.5
PCDHB11-202ENST00000624887 DUX1O43812 170 aa18.15■□□□□ 0.5
PCDHB11-202ENST00000624887 NGFRP08138 427 aa18.15■□□□□ 0.5
PCDHB11-202ENST00000624887 PSMD7P51665 324 aa18.15■□□□□ 0.5
PCDHB11-202ENST00000624887 FOXK2Q01167 660 aa18.15■□□□□ 0.5
PCDHB11-202ENST00000624887 WDR45BQ5MNZ6 344 aa18.15■□□□□ 0.5
PCDHB11-202ENST00000624887 NIPAL3Q6P499 406 aa18.15■□□□□ 0.5
PCDHB11-202ENST00000624887 SLC35F3Q8IY50 421 aa18.15■□□□□ 0.5
PCDHB11-202ENST00000624887 SLC25A45Q8N413 288 aa18.15■□□□□ 0.5
PCDHB11-202ENST00000624887 MINDY2Q8NBR6 621 aa18.15■□□□□ 0.5
PCDHB11-202ENST00000624887 PTPMT1Q8WUK0 201 aaPredicted RBP18.15■□□□□ 0.5
PCDHB11-202ENST00000624887 SENP5Q96HI0 755 aaPredicted RBP18.15■□□□□ 0.5
PCDHB11-202ENST00000624887 PHOX2BQ99453 314 aa18.15■□□□□ 0.5
PCDHB11-202ENST00000624887 TXNL4BQ9NX01 149 aaKnown RBP18.15■□□□□ 0.5
PCDHB11-202ENST00000624887 QPCTLQ9NXS2 382 aa18.15■□□□□ 0.5
PCDHB11-202ENST00000624887 MUTYHQ9UIF7 546 aa18.15■□□□□ 0.5
PCDHB11-202ENST00000624887 SF3B6Q9Y3B4 125 aaKnown RBP18.15■□□□□ 0.5
PCDHB11-202ENST00000624887 TRAV27A0A087WT01 109 aa18.15■□□□□ 0.5
PCDHB11-202ENST00000624887 J3QRE1 110 aa18.15■□□□□ 0.5
PCDHB11-202ENST00000624887 GLB1P16278 677 aa18.15■□□□□ 0.5
PCDHB11-202ENST00000624887 ALAS2P22557 587 aa18.15■□□□□ 0.5
PCDHB11-202ENST00000624887 CD79BP40259 229 aa18.15■□□□□ 0.5
PCDHB11-202ENST00000624887 ETV6P41212 452 aa18.15■□□□□ 0.5
PCDHB11-202ENST00000624887 OR1D4P47884 311 aa18.15■□□□□ 0.5
PCDHB11-202ENST00000624887 ARL4DP49703 201 aa18.15■□□□□ 0.5
PCDHB11-202ENST00000624887 SLC35F1Q5T1Q4 408 aa18.15■□□□□ 0.5
PCDHB11-202ENST00000624887 OTULINQ96BN8 352 aa18.15■□□□□ 0.5
PCDHB11-202ENST00000624887 IFT27Q9BW83 186 aa18.15■□□□□ 0.5
PCDHB11-202ENST00000624887 BARHL1Q9BZE3 327 aa18.15■□□□□ 0.5
PCDHB11-202ENST00000624887 ERVMER34-1Q9H9K5 563 aa18.15■□□□□ 0.5
PCDHB11-202ENST00000624887 ERVK13-1Q9NX77 482 aa18.15■□□□□ 0.5
PCDHB11-202ENST00000624887 SEMA5BQ9P283 1151 aa18.15■□□□□ 0.5
PCDHB11-202ENST00000624887 CRNNQ9UBG3 495 aaPredicted RBP18.15■□□□□ 0.5
PCDHB11-202ENST00000624887 TNFRSF10DQ9UBN6 386 aa18.15■□□□□ 0.5
PCDHB11-202ENST00000624887 COL6A3P12111 3177 aa18.14■□□□□ 0.5
PCDHB11-202ENST00000624887 UPK1BO75841 260 aa18.14■□□□□ 0.49
PCDHB11-202ENST00000624887 CSTAP01040 98 aa18.14■□□□□ 0.49
PCDHB11-202ENST00000624887 ATP6V1E1P36543 226 aa18.14■□□□□ 0.49
PCDHB11-202ENST00000624887 RORCP51449 518 aa18.14■□□□□ 0.49
PCDHB11-202ENST00000624887 KIRREL2Q6UWL6 708 aa18.14■□□□□ 0.49
PCDHB11-202ENST00000624887 MEPCEQ7L2J0 689 aaKnown RBP18.14■□□□□ 0.49
PCDHB11-202ENST00000624887 OAFQ86UD1 273 aa18.14■□□□□ 0.49
PCDHB11-202ENST00000624887 CADM2Q8N3J6 435 aa18.14■□□□□ 0.49
PCDHB11-202ENST00000624887 D2HGDHQ8N465 521 aa18.14■□□□□ 0.49
PCDHB11-202ENST00000624887 KLHL36Q8N4N3 616 aa18.14■□□□□ 0.49
PCDHB11-202ENST00000624887 PARP16Q8N5Y8 322 aa18.14■□□□□ 0.49
PCDHB11-202ENST00000624887 OR52N1Q8NH53 320 aa18.14■□□□□ 0.49
PCDHB11-202ENST00000624887 OR51A7Q8NH64 312 aa18.14■□□□□ 0.49
PCDHB11-202ENST00000624887 SECISBP2Q96T21 854 aaKnown RBP18.14■□□□□ 0.49
PCDHB11-202ENST00000624887 YIPF2Q9BWQ6 316 aa18.14■□□□□ 0.49
PCDHB11-202ENST00000624887 RPS6KB2Q9UBS0 482 aa18.14■□□□□ 0.49
PCDHB11-202ENST00000624887 A0A1B0GVT2 93 aa18.13■□□□□ 0.49
PCDHB11-202ENST00000624887 GIMD1P0DJR0 217 aa18.13■□□□□ 0.49
PCDHB11-202ENST00000624887 GABRA5P31644 462 aa18.13■□□□□ 0.49
PCDHB11-202ENST00000624887 SLC37A1P57057 533 aa18.13■□□□□ 0.49
PCDHB11-202ENST00000624887 GPLD1P80108 840 aa18.13■□□□□ 0.49
PCDHB11-202ENST00000624887 ACSM1Q08AH1 577 aa18.13■□□□□ 0.49
PCDHB11-202ENST00000624887 KLHL26Q53HC5 615 aa18.13■□□□□ 0.49
PCDHB11-202ENST00000624887 QSOX2Q6ZRP7 698 aa18.13■□□□□ 0.49
PCDHB11-202ENST00000624887 SLC43A2Q8N370 569 aa18.13■□□□□ 0.49
PCDHB11-202ENST00000624887 SIRT6Q8N6T7 355 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms