RNA–Protein interactions for RNA: ENST00000624403.1

ATRX-216, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-216ENST00000624403 ALDH3B2P48448 385 aa9.47□□□□□ -0.89
ATRX-216ENST00000624403 NR1H2P55055 460 aa9.47□□□□□ -0.89
ATRX-216ENST00000624403 GABARAPL2P60520 117 aa9.47□□□□□ -0.89
ATRX-216ENST00000624403 PSPHP78330 225 aa9.47□□□□□ -0.89
ATRX-216ENST00000624403 TSPAN31Q12999 210 aa9.47□□□□□ -0.89
ATRX-216ENST00000624403 SKP2Q13309 424 aa9.47□□□□□ -0.89
ATRX-216ENST00000624403 PCOLCEQ15113 449 aa9.47□□□□□ -0.89
ATRX-216ENST00000624403 SMN1Q16637 294 aaKnown RBP9.47□□□□□ -0.89
ATRX-216ENST00000624403 FOXB2Q5VYV0 432 aa9.47□□□□□ -0.89
ATRX-216ENST00000624403 C12orf73Q69YU5 71 aa9.47□□□□□ -0.89
ATRX-216ENST00000624403 ZNF773Q6PK81 442 aa9.47□□□□□ -0.89
ATRX-216ENST00000624403 KIRREL2Q6UWL6 708 aa9.47□□□□□ -0.89
ATRX-216ENST00000624403 DHRS13Q6UX07 377 aa9.47□□□□□ -0.89
ATRX-216ENST00000624403 C6orf15Q6UXA7 325 aaPredicted RBP9.47□□□□□ -0.89
ATRX-216ENST00000624403 C16orf47Q6ZP98 133 aaPredicted RBP9.47□□□□□ -0.89
ATRX-216ENST00000624403 SATL1Q86VE3 508 aa9.47□□□□□ -0.89
ATRX-216ENST00000624403 KIF18BQ86Y91 864 aa9.47□□□□□ -0.89
ATRX-216ENST00000624403 ZNF440Q8IYI8 595 aa9.47□□□□□ -0.89
ATRX-216ENST00000624403 DEPDC4Q8N2C3 294 aa9.47□□□□□ -0.89
ATRX-216ENST00000624403 CADM2Q8N3J6 435 aa9.47□□□□□ -0.89
ATRX-216ENST00000624403 LSMEM1Q8N8F7 131 aa9.47□□□□□ -0.89
ATRX-216ENST00000624403 RHOXF1Q8NHV9 184 aa9.47□□□□□ -0.89
ATRX-216ENST00000624403 SGCDQ92629 289 aa9.47□□□□□ -0.89
ATRX-216ENST00000624403 DEPDC7Q96QD5 511 aa9.47□□□□□ -0.89
ATRX-216ENST00000624403 ZPBPQ9BS86 351 aa9.47□□□□□ -0.89
ATRX-216ENST00000624403 DSN1Q9H410 356 aa9.47□□□□□ -0.89
ATRX-216ENST00000624403 POLR1BQ9H9Y6 1135 aa9.47□□□□□ -0.89
ATRX-216ENST00000624403 FAM86C1Q9NVL1 165 aa9.47□□□□□ -0.89
ATRX-216ENST00000624403 CNIH4Q9P003 139 aa9.47□□□□□ -0.89
ATRX-216ENST00000624403 CCDC187A0A096LP49 1063 aa9.46□□□□□ -0.9
ATRX-216ENST00000624403 TMEM200CA6NKL6 621 aa9.46□□□□□ -0.9
ATRX-216ENST00000624403 C9orf172C9J069 976 aa9.46□□□□□ -0.9
ATRX-216ENST00000624403 GTPBP1O00178 669 aaKnown RBP9.46□□□□□ -0.9
ATRX-216ENST00000624403 PLD2O14939 933 aa9.46□□□□□ -0.9
ATRX-216ENST00000624403 CHP2O43745 196 aa9.46□□□□□ -0.9
ATRX-216ENST00000624403 XPNPEP2O43895 674 aa9.46□□□□□ -0.9
ATRX-216ENST00000624403 FAM20BO75063 409 aa9.46□□□□□ -0.9
ATRX-216ENST00000624403 OR6B1O95007 311 aa9.46□□□□□ -0.9
ATRX-216ENST00000624403 NADKO95544 446 aaPredicted RBP9.46□□□□□ -0.9
ATRX-216ENST00000624403 DLGAP3O95886 979 aa9.46□□□□□ -0.9
ATRX-216ENST00000624403 NGFRP08138 427 aa9.46□□□□□ -0.9
ATRX-216ENST00000624403 GABRB1P18505 474 aa9.46□□□□□ -0.9
ATRX-216ENST00000624403 FOLR3P41439 243 aa9.46□□□□□ -0.9
ATRX-216ENST00000624403 PNLIPRP2P54317 469 aa9.46□□□□□ -0.9
ATRX-216ENST00000624403 CDC42P60953 191 aa9.46□□□□□ -0.9
ATRX-216ENST00000624403 CXCR4P61073 352 aa9.46□□□□□ -0.9
ATRX-216ENST00000624403 PIGFQ07326 219 aa9.46□□□□□ -0.9
ATRX-216ENST00000624403 TRIP6Q15654 476 aaKnown RBP9.46□□□□□ -0.9
ATRX-216ENST00000624403 NADK2Q4G0N4 442 aa9.46□□□□□ -0.9
ATRX-216ENST00000624403 HES3Q5TGS1 186 aa9.46□□□□□ -0.9
ATRX-216ENST00000624403 RASSF6Q6ZTQ3 369 aa9.46□□□□□ -0.9
ATRX-216ENST00000624403 TIPARPQ7Z3E1 657 aaKnown RBP9.46□□□□□ -0.9
ATRX-216ENST00000624403 MARCH3Q86UD3 253 aa9.46□□□□□ -0.9
ATRX-216ENST00000624403 CCDC103Q8IW40 242 aa9.46□□□□□ -0.9
ATRX-216ENST00000624403 RNF113BQ8IZP6 322 aaKnown RBP9.46□□□□□ -0.9
ATRX-216ENST00000624403 IQCF1Q8N6M8 205 aa9.46□□□□□ -0.9
ATRX-216ENST00000624403 POGLUT1Q8NBL1 392 aa9.46□□□□□ -0.9
ATRX-216ENST00000624403 OR5L2Q8NGL0 311 aa9.46□□□□□ -0.9
ATRX-216ENST00000624403 OR2Y1Q8NGV0 311 aa9.46□□□□□ -0.9
ATRX-216ENST00000624403 OR8K3Q8NH51 312 aa9.46□□□□□ -0.9
ATRX-216ENST00000624403 PFN4Q8NHR9 129 aa9.46□□□□□ -0.9
ATRX-216ENST00000624403 WDR36Q8NI36 951 aaKnown RBP9.46□□□□□ -0.9
ATRX-216ENST00000624403 NUBPLQ8TB37 319 aa9.46□□□□□ -0.9
ATRX-216ENST00000624403 PHOSPHO1Q8TCT1 267 aa9.46□□□□□ -0.9
ATRX-216ENST00000624403 THAP3Q8WTV1 239 aaPredicted RBP9.46□□□□□ -0.9
ATRX-216ENST00000624403 TMEM239Q8WW34 195 aa9.46□□□□□ -0.9
ATRX-216ENST00000624403 RTN4RQ9BZR6 473 aa9.46□□□□□ -0.9
ATRX-216ENST00000624403 ZNF700Q9H0M5 742 aa9.46□□□□□ -0.9
ATRX-216ENST00000624403 EGLN3Q9H6Z9 239 aa9.46□□□□□ -0.9
ATRX-216ENST00000624403 KRCC1Q9NPI7 259 aaPredicted RBP9.46□□□□□ -0.9
ATRX-216ENST00000624403 EXOSC3Q9NQT5 275 aaKnown RBP9.46□□□□□ -0.9
ATRX-216ENST00000624403 PAK1IP1Q9NWT1 392 aaPredicted RBP9.46□□□□□ -0.9
ATRX-216ENST00000624403 IMPAD1Q9NX62 359 aa9.46□□□□□ -0.9
ATRX-216ENST00000624403 RPS6KB2Q9UBS0 482 aa9.46□□□□□ -0.9
ATRX-216ENST00000624403 BLOC1S6Q9UL45 172 aa9.46□□□□□ -0.9
ATRX-216ENST00000624403 CARD8Q9Y2G2 431 aa9.46□□□□□ -0.9
ATRX-216ENST00000624403 LAMA1P25391 3075 aa9.46□□□□□ -0.9
ATRX-216ENST00000624403 ZNF318Q5VUA4 2279 aa9.45□□□□□ -0.9
ATRX-216ENST00000624403 NINQ8N4C6 2090 aa9.45□□□□□ -0.9
ATRX-216ENST00000624403 IGHV1-45A0A0A0MS14 117 aa9.45□□□□□ -0.9
ATRX-216ENST00000624403 A0A1W2PQD3 144 aa9.45□□□□□ -0.9
ATRX-216ENST00000624403 UNC119BA6NIH7 251 aa9.45□□□□□ -0.9
ATRX-216ENST00000624403 OR6C70A6NIJ9 312 aa9.45□□□□□ -0.9
ATRX-216ENST00000624403 ALG1L2C9J202 215 aa9.45□□□□□ -0.9
ATRX-216ENST00000624403 PTGES3LE9PB15 166 aa9.45□□□□□ -0.9
ATRX-216ENST00000624403 WWP2O00308 870 aa9.45□□□□□ -0.9
ATRX-216ENST00000624403 KPNA4O00629 521 aaPredicted RBP9.45□□□□□ -0.9
ATRX-216ENST00000624403 ZNF264O43296 627 aa9.45□□□□□ -0.9
ATRX-216ENST00000624403 FADS1O60427 444 aa9.45□□□□□ -0.9
ATRX-216ENST00000624403 ZNF354AO60765 605 aaPredicted RBP9.45□□□□□ -0.9
ATRX-216ENST00000624403 PPM1BO75688 479 aa9.45□□□□□ -0.9
ATRX-216ENST00000624403 ZFAND5O76080 213 aa9.45□□□□□ -0.9
ATRX-216ENST00000624403 HTR1AP08908 422 aa9.45□□□□□ -0.9
ATRX-216ENST00000624403 IFI30P13284 250 aa9.45□□□□□ -0.9
ATRX-216ENST00000624403 MAKP20794 623 aa9.45□□□□□ -0.9
ATRX-216ENST00000624403 RBM34P42696 430 aaKnown RBP9.45□□□□□ -0.9
ATRX-216ENST00000624403 NRG3P56975 720 aa9.45□□□□□ -0.9
ATRX-216ENST00000624403 CDK5Q00535 292 aa9.45□□□□□ -0.9
ATRX-216ENST00000624403 TEKQ02763 1124 aa9.45□□□□□ -0.9
ATRX-216ENST00000624403 PRKCDQ05655 676 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms