RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 RGS9BPQ6ZS82 235 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 SERPINA11Q86U17 422 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 ZZZ3Q8IYH5 903 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 CHDHQ8NE62 594 aaPredicted RBP5.11□□□□□ -1.59
CPNE3-208ENST00000614678 NFKBIDQ8NI38 313 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 CRIM1Q9NZV1 1036 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 KLHL13Q9P2N7 655 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 ING1Q9UK53 422 aaPredicted RBP5.11□□□□□ -1.59
CPNE3-208ENST00000614678 DTNAQ9Y4J8 743 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 PLCE1Q9P212 2302 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 GTPBP1O00178 669 aaKnown RBP5.11□□□□□ -1.59
CPNE3-208ENST00000614678 BCKDKO14874 412 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 STX11O75558 287 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 CSTAP01040 98 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 ATP6V1C1P21283 382 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 CCKARP32238 428 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 NSUN5P2Q63ZY6 315 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 MEX3BQ6ZN04 569 aaKnown RBP5.11□□□□□ -1.59
CPNE3-208ENST00000614678 ACAD11Q709F0 780 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 KDM8Q8N371 416 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 OR4D11Q8NGI4 311 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 SFXN5Q8TD22 340 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 DNAJB12Q9NXW2 375 aaKnown RBP5.11□□□□□ -1.59
CPNE3-208ENST00000614678 SUCOQ9UBS9 1254 aaKnown RBP5.11□□□□□ -1.59
CPNE3-208ENST00000614678 ABCA2Q9BZC7 2435 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 FAM234BA2RU67 622 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 CCT8L1PA6NM43 557 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 LRRN3E7EW58 273 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 FXYD1O00168 92 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 CPN1P15169 458 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 IDH2P48735 452 aaKnown RBP5.1□□□□□ -1.59
CPNE3-208ENST00000614678 CLNS1AP54105 237 aaKnown RBP5.1□□□□□ -1.59
CPNE3-208ENST00000614678 PER3P56645 1201 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 LGALS3BPQ08380 585 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 SMU1Q2TAY7 513 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 NUFIP2Q7Z417 695 aaKnown RBP5.1□□□□□ -1.59
CPNE3-208ENST00000614678 PTOV1Q86YD1 416 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 GRAMD2AQ8IUY3 354 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 DND1Q8IYX4 353 aaKnown RBP5.1□□□□□ -1.59
CPNE3-208ENST00000614678 STARD4Q96DR4 205 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 ZC3HAV1LQ96H79 300 aaKnown RBP5.1□□□□□ -1.59
CPNE3-208ENST00000614678 ZNF300Q96RE9 604 aaPredicted RBP5.1□□□□□ -1.59
CPNE3-208ENST00000614678 ZIM2Q9NZV7 527 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 CSPG4Q6UVK1 2322 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 NF1P21359 2839 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 ZNF264O43296 627 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 WDR1O75083 606 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 IL6P05231 212 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 NR2F1P10589 423 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 UBL4AP11441 157 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 NID1P14543 1247 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 IGFBP2P18065 325 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 CBLP22681 906 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 MSX1P28360 303 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 CHRNB4P30926 498 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 MSX2P35548 267 aaPredicted RBP5.1□□□□□ -1.59
CPNE3-208ENST00000614678 MDH1P40925 334 aaKnown RBP5.1□□□□□ -1.59
CPNE3-208ENST00000614678 CPA2P48052 419 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 KCNJ10P78508 379 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 GANABQ14697 944 aaKnown RBP5.1□□□□□ -1.59
CPNE3-208ENST00000614678 GSTA3Q16772 222 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 ANXA8L1Q5VT79 327 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 ZNF610Q8N9Z0 462 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 MIPOL1Q8TD10 442 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 C10orf82Q8WW14 230 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 SAR1AQ9NR31 198 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 KLHL28Q9NXS3 571 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 COQ3Q9NZJ6 369 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 ABCG2Q9UNQ0 655 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 IGLV3-32A0A0A0MS00 114 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 MBD3L4A6NDZ8 208 aaPredicted RBP5.1□□□□□ -1.59
CPNE3-208ENST00000614678 MBD3L3A6NE82 208 aaPredicted RBP5.1□□□□□ -1.59
CPNE3-208ENST00000614678 AGAP5A6NIR3 686 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 MBD3L5A6NJ08 208 aaPredicted RBP5.1□□□□□ -1.59
CPNE3-208ENST00000614678 SLITRK5O94991 958 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 CPOXP36551 454 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 RPL3P39023 403 aaKnown RBP5.1□□□□□ -1.59
CPNE3-208ENST00000614678 ACAA2P42765 397 aaKnown RBP5.1□□□□□ -1.59
CPNE3-208ENST00000614678 ART3Q13508 389 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 FGFBP1Q14512 234 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 ZNF141Q15928 474 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 DUSP7Q16829 419 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 GLYR1Q49A26 553 aaPredicted RBP5.1□□□□□ -1.59
CPNE3-208ENST00000614678 XKRXQ6PP77 449 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 TUSC5Q8IXB3 177 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 MBD3L2Q8NHZ7 208 aaPredicted RBP5.1□□□□□ -1.59
CPNE3-208ENST00000614678 OSTF1Q92882 214 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 ELAC2Q9BQ52 826 aaKnown RBP5.1□□□□□ -1.59
CPNE3-208ENST00000614678 SLC24A3Q9HC58 644 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 QPCTLQ9NXS2 382 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 GALNT8Q9NY28 637 aa5.1□□□□□ -1.59
CPNE3-208ENST00000614678 C6orf203Q9P0P8 240 aaPredicted RBP5.1□□□□□ -1.59
CPNE3-208ENST00000614678 MED13LQ71F56 2210 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 A0A1W2PR80 420 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 SLCO1B7G3V0H7 640 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 TMIGD3P0DMS9 266 aaPredicted RBP5.09□□□□□ -1.59
CPNE3-208ENST00000614678 HTR2AP28223 471 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 P2RX1P51575 399 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 DSTNP60981 165 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 SGCBQ16585 318 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms